Xiphophorus couchianus (Monterrey platyfish): 114139721
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Entry
114139721 CDS
T05908
Symbol
rapgef2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114139721 (rapgef2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114139721 (rapgef2)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
PDZ_6
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
114139721
NCBI-ProteinID:
XP_027865594
LinkDB
All DBs
Position
23:2681700..2782910
Genome browser
AA seq
1643 aa
AA seq
DB search
MASYVDNRFRQAVMMNPSERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDVGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPTGKPPVARGYHTECNKP
KLPADFSRLHLADGLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATENEPGDMDLSGLP
ETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDSRTEMLCMGNSF
GVSPTMEKEFMKGVMRTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTPERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGKKLLEW
FHDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTHFLEEFESNLEKEKMCGHLRLLNIACAA
KAKPRLVTLTKPSRDSPLAFTLLGGQEKGFCIFIDTVEPGSKAAEAGLKRGDQILEVNGQ
NFETVQFSKANEILKNNTHLSITVKTNLLVFKELLTRPEHEHELDGDEEHDRKNGAPHLP
KIGDIKKGSRYSIPDLAVDVEQVMGLEKASKKAKSNTVGGRNKLKKIFDKTLTSILPPKP
YNDVCVGQSQDDSIVGMKPSKQIPAALPVSGNLSSSNPDLLQSHHRILDFNNQPVPVIQN
MSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTATPEAYSLCEVSVTPEGVIK
QRRLPDQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQIALLQLSTVEVATQ
LSMRAFELFCAIEPTEYIDDLFKLRSKTGSVSLKRFEESINHETFWVATEVVREPNQLKR
MKIIKHFIKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLF
DPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEI
RHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVSQTGGHKKRVRRSSFLNA
KKLYEDAQMARKVKQYLSNLSLETNEESLQTFSLQCEPSISTLPKNAGGKRPDTSPVVPR
AASQQRGQLAKGNQVLQVPSVALYPSRKRVPVKDLPPFGTSSPQSLKKILSLSEEGNERH
RRQPEDTMSNASSQLSSPPTSPQSSPKKGYSRSGDAYSDSGHSEISSRSSLVSNSSFDMA
QEERRLRHSGGAGESHMGGPRLERRATTDPDQYSLGSYSSMQDCRGIYAGCSTVLSSPSS
EELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQNMQQGRSWELGIGGLSSASEALLGG
PAALWAAQARGSWASASSSSSSAAYWGEESEGDTGTIKRRGGKDVNADAETSSITSTGSE
EAKQLGRPSPSPITAGGKAFLSRKEGRYREPPPTPPGYTALTLSDLAEGQHPPPPVPTTT
VTHSSRRPPDYTTALQRSRMVTQSPDSHQAHQAAKHRGGSLHRTRSPADEQEPDDEEEGE
SLSPKLVALRKPLARHTPEAPRP
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggataaccgctttcggcaggctgtgatgatgaatccgtctgaacgg
acgcaacaggacctggaaatcgtttactcatatctccatgggatggaggctctgtccaac
ctgcgggagcaccagctgagaataatgtgcgagacggtgcgatacgagagacacgaggcc
aacgaagtgctctactacccagatgatgtgggaagctgctggtacatcctgttgtcaggc
tcggttttcatcaaggagtccatgtttcttccaagaagcagttttgggaagcgatcagca
ggcagcctgcggcgtggatgtgaatgcatcgtccttgaaccctcagaaatgattgtggtg
gactatatggatgaaaatgaggagtactttcagcgacaagcctcgcaccgacagtcccgg
cggcgctttcggaagatcaaccagaaaggcgagcgacagactatcatcgacacggtggac
ccgtaccccactggaaagccgcccgtagcccggggttaccacacggaatgcaataaaccg
aagctccctgcagacttcagcagactgcacctggccgacggcttacacccacaggtgacc
cacgtctcgtccagccactcaggatgtagtatcaccagtgactctggaagcagcagcctg
tcagacatttaccaggccacagagaacgagccaggtgacatggacctgagcggcctgcct
gagaccgcagtggactccgaggaggacgatgacgaggaggacatcgagcgagcctccgac
cccctgatgagccgggacatcgtccgggactgcctggagaaggaccccatggaccggacg
gatgatgacatagagcaattactggagttcatgcatcagctgccagcgttcgctaacatg
accatgtcggtgaggagggagctctgcgcagtcatggtgttcgccgtggtggagcgagcc
ggcaccatcgttctcaatgatggagaagagctggactcgtggtcggtgatcctgaacggc
tcagtggaggtgacctaccccgacagtcggacagagatgctgtgcatggggaacagcttc
ggtgtgtctccaaccatggagaaggaatttatgaaaggcgtcatgaggaccaaggtggac
gactgccagtttgtatgcatagcccagcaggactactgctgcatcctcaaccaggtggag
aagaacatgcagaaggttgaggaggaaggagagatcgtcatggtgaaggaacaccgtgaa
ctggatcgtaccggcaccaggaagggacatattgtcatcaagggcacgcctgagcgtctc
accatgcacctggtggaggagcactcggtggtggatcctacctacattgaggacttcctg
ttgacctacaggaccttcctctccagccccatggtcgtgggaaagaagctcctggaatgg
tttcacgacccaagtctcagggacaaggttacacgggtagtcttgctgtgggtaaacaat
cactttaatgacttcgagggagaccctgccatgactcactttctggaggagtttgagagc
aatctggagaaggagaaaatgtgcgggcacctcagactgttaaacatagcgtgtgctgct
aaagccaagccacggctggtgacgctgaccaagccgtccagagactctcctctggccttc
accctcctcggaggtcaagagaaaggtttctgcatcttcattgataccgtggagccaggg
agcaaggcagcagaggccggacttaagcgtggagatcagatcttggaggtaaatggacag
aattttgagactgtccagttcagcaaagccaatgagattttaaagaacaacacccactta
tccataactgtgaaaacaaatcttttagtgtttaaggagctgctaacacggccagaacat
gagcatgagttggacggggacgaggaacacgacaggaagaacggtgcgcctcatctacca
aaaatcggggacattaagaaggggagccgttactccataccggacctggcggtagacgtg
gaacaggtcatggggttagagaaagccagcaaaaaggccaagagcaacacagtgggaggc
cgcaacaagctgaaaaaaatctttgataagacactcaccagcatcctgccccctaaaccg
tacaacgacgtttgtgtaggccaatcacaggatgacagtatagtggggatgaagccgtcc
aagcagatcccagcagctctgccggtcagtgggaacctgtcgtcgtcgaacccggacctc
ctgcagtcacaccaccgcatcctcgacttcaacaaccagcctgtaccggtcatccagaat
atgtcagaccaagtgctacgagtattcaaggcggaccagcagtctcggtatatcatgatt
gggaaggacacaaccgctaaagaggtggtggcccaggctatcagggagtttgctctgact
gcaacgccagaggcttattcactatgtgaagtgtctgtcacaccggagggcgtcattaag
cagaggcgcttaccagaccagctttccaaactagctgacaggattcagctaagtggcaga
tactacttgaagagtaatatggagacggagacattgtgctctgatgaagacgcgcaggac
ctcctacgagaaggccagatcgctctgctgcagctcagcacggtggaggtggccacccag
ctctccatgagagcctttgaacttttctgtgccatcgagcccaccgaatacatcgacgac
ctgttcaagctgcgctccaagacaggctcggtcagcctcaagcgcttcgaggagtccatc
aaccatgagaccttctgggtggcaaccgaggtggtacgggaacccaaccagctcaagcgc
atgaagatcataaagcatttcatcaagattgctctacattgtcgagagtgcaagaacttc
aactccatgtttgccatcataagtggcttgaacttggctccagtttccagactgagggga
acatgggaaaaattgccaagcaaatatgagaaattgtttggggacttgcaggatctcttc
gatccctctagaaatatggccaagtacaggaatgttctcaacaatcagaaccttcagcca
ccaatcattcccctgttcccagttatcaagaaggacctcacattcctacacgaaggcaat
gactccaaagtggacggtttggtgaactttgagaagcttaggatgattgccaaagaaatc
cgtcacgtgggccgcatggcgtctgtcaacatggaccctgctcttatgttccggaccagg
aagaagaaatggagaagtttaggctctttaagtcagggcagcgccaatgcagccgtgctc
gacgtcagccagacaggtggccacaagaagcgggttcgacgcagctccttcctcaacgcc
aaaaagctctacgaagacgcccagatggccaggaaggtcaagcagtatctgtccaaccta
agtctggaaaccaacgaggagagccttcagacattttcactacagtgtgagccctcaatc
agcacattacccaagaatgctggtgggaagcgacctgacacttccccggtcgtgcccaga
gcagccagtcagcagcggggccagttagccaaaggaaaccaggtcctgcaagttccctct
gtggcactctacccatcccggaaaagagtgccagtcaaggatctaccaccgtttggcacc
agttcgccccagtccctgaagaagatcctgtctctgtctgaggaggggaacgaaaggcac
cggaggcagccagaggacaccatgtccaacgcttcctcccagctctcctctccgcccacc
tccccccagagctcaccaaagaagggttacagcaggtcaggcgacgcctactcggactct
ggccacagcgagatctcgtcccgctccagcctggtaagtaactcgtccttcgacatggcg
caggaggagcggagactccgtcactctggaggagctggcgaatcccacatgggtgggcct
cggctggagagaagagccacgaccgaccctgatcagtacagtctggggtcctattcttca
atgcaggactgtcggggtatttacgccggctgctccactgtcctctcctcgcccagctca
gaggaactgactcaggatcagggagatcgtgtgtctctggatgctgcagacagtggccgc
ggctcctggacttcctgttcctctggctcccatgacaatattcagaacatgcagcagggc
cgaagctgggagcttggcattggagggctgtcttcggcatcagaggcgttgttagggggt
ccagcggcgctgtgggcggcgcaggccaggggcagctgggcatcggccagctcctcctca
tcctcagccgcctactggggagaagaatcagaaggagacacagggacgatcaagaggaga
ggaggaaaggacgtaaatgcagacgcagagacaagtagcatcacatccaccgggtcggag
gaggccaagcagctcggccggccgtctccatcacccatcacagctgggggtaaagccttt
ctttctcgaaaagagggccgataccgggagcccccgccgactccgcccggctacaccgcc
ctgaccctctcagacctcgccgagggtcagcacccgcccccacccgtacccacgacaacg
gtaacccactcgagtcgccggccgccagactacaccacggctctacagcgctcgcggatg
gtgacccagtcgcccgactcccaccaggcccaccaggccgccaaacaccggggaggcagc
ctccaccgcacccgctcccccgcagacgagcaagaacccgacgacgaagaggagggtgag
tccttgtctcccaaactagtggctctgaggaaaccgttggcccgacacacgcctgaggcc
cccagaccgtga
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