Xiphophorus couchianus (Monterrey platyfish): 114140412
Help
Entry
114140412 CDS
T05908
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
xco04082
Neuroactive ligand signaling
xco04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114140412
04082 Neuroactive ligand signaling
114140412
04519 Cadherin signaling
114140412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114140412
Ion channels [BR:
xco04040
]
Ligand-gated channels
GABA-A
114140412
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
114140412
NCBI-ProteinID:
XP_027866026
LinkDB
All DBs
Position
24:complement(14742197..14800045)
Genome browser
AA seq
544 aa
AA seq
DB search
MDLYWEGLTRNMFHCWMLLLLSQGFVFNNVQGELPFMLENNAAMLVNLNAVDGNKKLFAI
YDTSVNEPGNMSIVKETVDKLLKGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYT
LTMYFQQYWRDKRLAYIGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL
HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGESAVTGV
TRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWV
SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLE
YAFVNYIFFGRGPQMQKKLAEKAEKANNERAAKYDAAREAGSRTASLKRSNQVKGLRHSR
SAEPHGHGNILLTTLEIHNEVAGGEITTSVADIRNSQSMVQLDSTASSNIQYRKQSGGVG
PRSTSRHSLDRSAQMKRSRLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPSVFSLFNLIYW
LYYV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtactgggaagggttgacaaggaacatgttccactgctggatgttactcctt
ctctcccaaggatttgtattcaacaacgtccaaggggaacttcctttcatgttggagaac
aacgctgcaatgctggtcaacttgaatgctgttgacggaaacaagaagttgttcgccatc
tatgacaccagcgtcaacgaaccgggcaacatgtccatcgtgaaggaaacggtggataaa
ctactgaaggggtacgacatccgactgagaccggactttggaggccccccagttgcagtc
ggcatgagtatagatgtggccagcatagacatggtgtcagaagtcaacatggactacacg
ctgaccatgtatttccagcagtactggagggacaagcgtctagcctacataggaatccca
ctaaacttgactctggacaacagggttgcagaccagctgtgggtcccagacacctacttc
ctcaatgacaagaagtcttttgttcatggagtcacagtcaaaaatcgcatgattcgcctt
cacccagacgggactgtcctatatgggctcaggataacaacaacagctgcttgcatgatg
gacctcaggaggtatcccctggatgagcagaactgcactctggagatagagagctatggc
tacaccacagatgacatcgagttctactggaagggaggcgagtcggccgtaaccggggtg
acgcggatcgagctgccgcagttctccattgttgactacaaactagtttccagaaatgtt
gtcttttccacaggtgcctatcctcgactgtcgttgagcttcaagctgaagaggaacatc
ggctacttcattttgcagacgtacatgccatcaatcctgatcaccatcttatcctgggta
tccttctggataaactatgatgcatctgcagccagggtggctcttggaatcaccacggta
ctgaccatgaccaccatcaacacacacctgagggagacgctacccaagatcccatatgtc
aaggccatcgacatgtacctaatgggctgctttgtcatggtcttcctggcccttcttgag
tacgcctttgtcaactacatcttcttcgggaggggccctcagatgcagaagaagttggcg
gagaaagcagagaaggccaacaatgagcgagcggccaagtacgacgcagcaagggaggca
ggtagtaggaccgcatccctaaaacggtccaatcaggttaaaggtcttcgccactcacgc
tcggcggaaccacatggtcatggaaacatcctgctgacaaccttagagatccacaacgaa
gttgcaggaggtgagatcaccaccagcgtggcagacattagaaactctcagtccatggta
cagttggacagcacggcgtcgtcaaacatccaataccgcaagcagagcggtggggtgggg
ccacgctccaccagccgccactctctggaccgctctgcccagatgaagcggagccgacta
cggaggcggtcctcccagctcaaaattaaaatccccgacctgacggacgtgaacgccatt
gaccgctggtctcgcatcgtcttcccgtccgttttctcgctgttcaacctcatctactgg
ctctactatgtctga
DBGET
integrated database retrieval system
