Xiphophorus couchianus (Monterrey platyfish): 114140518
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Entry
114140518 CDS
T05908
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xco04054
]
114140518
Pattern recognition receptors [BR:
xco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114140518
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
114140518
NCBI-ProteinID:
XP_027866282
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All DBs
Position
24:18850116..18859154
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AA seq
1106 aa
AA seq
DB search
MSPPGLFRTRLSLKNKTGLWEPEPDSAPDSVLQPQPSCLSFRSNQSKSEPLQFKGRFCTS
ELDQCQFFLPRPSSDPEPEPSCLSLRSSQAAGWKSHPDLRVDQQSSAVPSGPSGQQLQTQ
LDSIFTELERNMIRFIKNELKKIQKVLNPCYPECLESRKEDEEMVEGDDDEQRKRSSSEA
LLKIIVLFLKKMNQEELAEHLQSKTPSMCQHNLKSSLKTKFQCVFEGIAKAGSPTLLNQI
YTELYITEGGTGEVNQEHEVRQIETASRKQHRPETTIRQEDIFKVQPGRDQPIRTMMTKG
AAGIGKTVLTQKFTLDWAEDKTNQNIQFIFPFTFRELNVLREKKFSLVELIHHFFPETKG
IFSFEQFQVLFIFDGLDESRLGLDFNNNPILTDVTESSSVDVLLTNLIRGKLLPSALLWI
TTRPAAANQIPAQCVGMVTEVRGFTDPQKEEYFRKRFRDKTQTKKIISHIKTSRSLHIMC
HIPVFCWITATVLEDVMETREGGELPKTLTEMYIHFLVVQTKVMKVKYDGGSETDPHWSP
ESRKMIESLGKLSFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFREERGLYQDK
VFCFVHLSVQEFLAALHVHLTFINSGVNLLEECETEDKEPALANLHQNAVDKALQSPNGH
LDLFLRFLVGLSLQTNQRLLHGLQTQKERSLQKNQETIQYIKQKISDSQSVEKSINLFYC
LNELNDRSLVEEIQRSLSSGRLSTDKLSPAQWSALVFILLSSEKDLDEFDLKKYSASEEA
LLRLLPVVKAAKKAVLSGCNLSARSCEALSSVLGSQSSSLRDLDLSNNDLEDSGIKHLCH
GLESPCCKLETLSLSGCLISEKGCSSLALALTSNPSHLRELDLSYNHPGEAGLELLSVSL
KMPDCRLDAIRTEPGSVQWLKPNFTKYFCQLTLDPNTAHKFLRLSENNRKVTDLRKEHPY
PDHQERFDYWPQVLCETGLSGRCYWEVEWVGKVYVAVSYRGIGRNGDSDGSKFGGNDQSW
CLACTDGGYSAWHNNSGSPIPLPPSPTASHRVGVYVDGPAGILSFYRVSGDVVTHLHTFS
TTFTEPLYAGFGYGVKFNSSALLCQL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgagtccacccggcttgttcagaaccagactttctctgaagaacaaaaccggtctctgg
gaaccagaaccggattctgctccggattcggtccttcaacctcaacccagctgtttgtca
tttcggagcaaccaatcaaaatcagaacctcttcagtttaaaggaaggttctgcacatct
gaactggatcagtgccagttttttctccccagaccaagttctgatccagaacccgaaccc
agttgtttgtccctgaggagcagccaggcagcaggatggaaatcccacccagacctgaga
gtggaccagcagagctcagcggttcccagcggtccgtctgggcagcagcttcaaacacag
ctggactccatatttacggaactggagcgaaacatgatccgttttataaagaacgaactg
aagaagatccagaaggttttgaatccatgttacccagaatgcttagagagtcggaaggag
gatgaggagatggtggagggtgatgatgacgagcagaggaagaggagcagcagtgaagct
ttgctgaagatcatagttttgttcttgaagaagatgaatcaggaggaactggccgagcat
ctgcagagcaaaactccttccatgtgtcaacataaccttaaatcctccctgaagacgaag
ttccagtgtgtgtttgagggaatcgctaaagcaggaagtccaaccctgctgaaccagatc
tacactgagctctacatcacagagggaggaactggagaggtcaaccaggaacatgaggtc
agacagattgaaacagcatccaggaaacaacacagaccagaaacaacaatcagacaagaa
gacatctttaaagtccaacctggaagagatcaaccaatcagaacaatgatgacaaaggga
gcagctggcattgggaaaacagtcttaacacagaagttcactctggactgggctgaagac
aaaaccaaccagaacatccagttcatatttccattcaccttcagagaactgaatgtgctg
agagagaaaaagttcagcttggtggaactgattcatcacttctttcctgaaaccaaagga
atctttagctttgaacagttccaggttctgttcatctttgatggtctggatgagagtcga
cttggtctggacttcaacaacaatccgatcctgactgatgttacagagtccagctcagtg
gatgttctgctgacaaacctcatcagggggaaactgcttccctctgctctcctctggata
accacacgacctgcagcagccaatcagatccctgctcagtgtgttggcatggtaacagag
gtcagagggttcactgacccccagaaggaggagtacttcaggaagagattcagggataag
actcaaaccaagaagatcatctcccacatcaagacatcacgaagtctccacatcatgtgt
cacatcccagttttctgctggatcactgctacagttctggaggatgtgatggagaccaga
gagggaggagagctgcccaagaccctgactgagatgtatatccacttcctggtggttcag
accaaagtgatgaaggtcaagtatgatggaggatcagaaacagatccacactggagtcca
gagagcaggaagatgatagagtctctgggaaaactgtcttttgatcagctgcagaaagga
aacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctca
gtgtactcaggagtgttcacacagatctttagggaggagagagggctgtaccaggacaag
gtgttctgcttcgtccatctgagtgttcaggagtttctggctgctcttcatgttcatctg
accttcatcaactctggagtcaatctgcttgaagaatgtgagacagaagataaggaacct
gcactggctaatttacatcagaatgctgtggacaaggcattacagagtccaaatggacac
ctggacttgttccttcgcttccttgtgggtctttcactgcagaccaatcagagactccta
catggtctccagacacagaaggaaagaagtttacagaaaaaccaggaaacaattcagtac
ataaagcagaaaatcagtgacagtcagtctgtagagaagagtatcaacctgttctactgt
ctgaatgagctgaacgatcgttctctagtggaggagattcaacggtctctgagttcagga
cgtctctccacagataaactgtctcctgctcagtggtcagctctggtcttcatcttactg
tcatcagaaaaagatctggatgagtttgacctgaagaaatactcggcttcagaagaggct
cttctcaggctgctgcctgtggtcaaagctgctaagaaagctgtgttgagtggctgtaac
ctgtcagcaagaagctgtgaagctctttcctcagttctcggttcccagtcatctagtttg
agagacctggacctgagtaacaacgacttggaggactctgggataaagcacctgtgccat
ggactggagagtccatgctgcaaacttgaaactctcagtctttcaggctgtctgatctca
gaaaaaggttgttcctctctggctttggctctgacctccaacccctcccacctgagagag
ctggacctgagctacaaccatccaggagaggcaggactggagctgctgtcagtcagtcta
aagatgcctgactgcaggctggacgccatcagaactgaacccggttctgtccagtggttg
aagccaaacttcacaaaatacttctgccagctcacactggacccaaacacagcgcacaag
ttcctcagactgtctgagaacaacaggaaggtgaccgacctacggaaggaacacccatac
cccgatcaccaggaaagatttgactactggccccaggtgctgtgtgaaactggtttgtct
ggtcgctgttactgggaggttgaatgggttggaaaggtttatgttgcagtgagctacaga
gggattgggagaaatggtgacagcgatggctccaagtttggagggaatgatcagtcttgg
tgtctcgcctgcactgatggaggatacagtgcttggcacaacaacagcgggtcgcccatt
cctcttcctccctctcctaccgcctctcaccgtgtgggcgtctatgtggacggtcctgct
ggcatcctgtccttctacagagtctccggtgatgtagtgacccacctccacaccttcagc
accacattcactgaaccgctctatgctggctttggttatggggtcaaatttaattcctct
gctcttttgtgtcagctgtaa
DBGET
integrated database retrieval system
