Xiphophorus couchianus (Monterrey platyfish): 114140565
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Entry
114140565 CDS
T05908
Name
(RefSeq) 7SK snRNA methylphosphate capping enzyme-like
KO
K15190
7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114140565
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
114140565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bin3
Methyltransf_12
Methyltransf_23
Methyltransf_25
Methyltransf_31
Methyltransf_11
MTS
PrmA
PCMT
Methyltransf_4
Methyltransf_32
CMAS
RrnaAD
Methyltransf_15
DOT1
tRNA_U5-meth_tr
Methyltransf_9
TRM5-TYW2_MTfase
GCD14
Ubie_methyltran
Methyltransf_PK
Motif
Other DBs
NCBI-GeneID:
114140565
NCBI-ProteinID:
XP_027866440
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Position
24:complement(20042849..20047698)
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AA seq
545 aa
AA seq
DB search
MSQEKYPVRLSPAFPAPVSLSEQLDKPRPPINPKNGHLPPPPPPAANQRIRKRRFSVGFK
GVAKRRRRANSESQAEPVLPSHFLLGGNIFDPLNLNSLLDEEVNRATNQETPRCSPLPSR
SRDAVEILVPRDVTDPLNLRGEDGDAATVLLSPLKSRRRHRYRQHGGGGEKEETPARLFL
PSAGPSVPASPLSCELNTSITCRDDLAPPPILPRRHTHPPPGSRRRRTASTRSADGGVTV
ETTKLAAKFQTPLVGGAKASRCGGPGLGSVPTSERKKALQRYRHGNRCRYYGYYGFYGDS
HEGRVGAEPDPRLRLLEADWFRDRTVLDVGCGAGHMTLAIARSFNPAHILGVELDERLVH
AARQNVRHFLSHDLVAAHRQEVMRAPPPLPVSFRVSRGPLSAPPLLPPSSSSSRFPDNVT
FIQGNYVCEGEVWPGRGHYDIIVALGVTKWVQLQSGDRGVVRLFRRAYQSLSPGGTLILE
PQPWSGYGRSKRDSTLRHFRTLRLRPELFTFLLTNTIGFTSYRPLTHTGNQRPIYLFHKG
STHRK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggaaaaataccctgtcagactaagccccgccttccccgctcctgtcagccta
tcagagcagctggataagccccgccctcccatcaatcctaaaaatggccacctgcccccc
cctcctcctcctgcagccaatcagaggatcaggaagaggcggttctccgtgggctttaaa
ggagtggccaaacgccgtcgccgtgccaacagtgagagccaggcggagccggtgctgccg
agtcacttcctgttgggggggaacatcttcgacccgctgaacctgaactccctgctggac
gaggaggtcaacagggcgaccaatcaggagacgccgcgctgctcccccctgccgtcccgc
agcagagacgccgtggagatcctggtcccccgggacgtcaccgaccccctgaacctgagg
ggggaggacggggacgccgccaccgtcctgctgtcccccctaaagtcccggaggagacac
cgctaccgacagcatgggggaggaggggagaaggaggagacgccggccaggctgttcctg
ccctcagcaggaccctcagttcctgcgtctcctctgtcctgtgagctcaacacctccatc
acctgccgggacgacttggctccgccccccatcctgccacgcagacacacccacccccct
cctgggagccgccgccgccgcaccgcctccaccaggtcggctgacggaggcgttaccgtg
gaaaccacaaagctggcagccaagttccagacgccactggtgggaggggctaaagccagc
aggtgtggaggacctggtcttggctccgtccccacatcagagaggaagaaggccctgcag
cgctaccggcacgggaaccgctgccgttactatggctactacggtttctacggcgacagc
cacgaggggcgggtgggggcggagcctgacccgcggctccgcctcctggaagccgattgg
ttcagagaccggacggttctggatgtgggctgcggcgccggtcacatgacgctggccatc
gccaggagctttaaccccgcccacatcctgggggtggagctagacgagcggctggtccac
gccgccaggcagaatgttcgtcacttcctgtcacatgacctggtggcggcacacagacag
gaagtgatgcgggcgccgcctcccctccccgtgtccttcagggtcagtcggggtcctctc
tcagctccgccccttctgccgccatcatcatcctcctccaggttccccgacaacgtcacc
ttcatccagggcaactacgtgtgtgagggggaggtgtggcctgggaggggccattatgac
atcattgtggctctgggcgtcaccaagtgggtgcagctgcagtcaggtgaccggggcgtg
gtccggctgttcagacgggcctatcagagcctgtcgccgggcggaacgctgatcctggag
ccgcagccctggagcggctacggccgcagcaagagggactcgacgctacgtcacttcaga
accctgaggctccgaccagaactattcaccttcctgctcaccaacaccatcggcttcacc
tcctacagaccgctcacacacacaggtaaccagagacccatctacctgttccacaagggc
tccacccacaggaagtga
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