Xiphophorus couchianus (Monterrey platyfish): 114140607
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Entry
114140607 CDS
T05908
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114140607 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114140607 (nhej1)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
114140607 (nhej1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
114140607
NCBI-ProteinID:
XP_027866504
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All DBs
Position
24:complement(20347928..20357479)
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AA seq
305 aa
AA seq
DB search
MNPRADPADDFLLQEPWLPACIDGCQLLAKSWFSDAEYCVLLTDMQGVWEERMDTAAIER
RAQELNRRLRAAVQAFFSHLREAAEPWLSGGGGGEAQMCVWRRDGVVTLKLKSELAGLPF
HWEFRCSPAPVALVCAQLVRPLLAMSRLLHRQLEEQGELLARKDQEIQDYRENGATLSRE
RLQTDVFNKQLYTEDFIQKNLPLLRSDPSDAPGFNADLQRLYAAVAAPHKRRRPQETHGD
PDRTEPPEPPAQTTVIGPGGGDPENQNPSGQVGPDGAAQAAAVGATRPAERQSSRPKKKK
VGLFR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagagcggacccagctgacgacttcctcctccaggagccctggcttcctgcc
tgcatcgacggctgccagctgctggccaagagctggttcagcgatgcagagtactgcgtc
ctgctgaccgacatgcagggcgtgtgggaggagcggatggatacagcggccatcgagcgc
cgggcgcaggagctgaaccggcgtctgcgcgccgccgtccaggccttcttctcccatctg
cgtgaggcggctgagccctggctgtcggggggaggcggcggcgaggcccagatgtgtgtg
tggcggcgtgacggggtcgtgaccttgaagctgaagagcgagctggctggcctgccgttc
cactgggagttccgctgcagccccgctcccgtcgctctggtgtgcgctcagctggtgcgc
cccctgctggccatgagccgcctgctgcacaggcagctggaggagcagggagagctgctg
gccaggaaggaccaggagatccaggactaccgggagaacggagccacgctcagcagagag
cgcctgcagacggacgttttcaacaaacagctctacacagaggacttcattcagaagaac
cttcctctgctgcggtcggatccgtccgacgctccgggattcaacgccgacctgcagcgg
ctctacgccgccgtcgccgcaccgcacaaacgcagacgaccgcaggagacccacggcgac
ccagaccggacagaaccaccagaaccaccagcacagactacagtgattggacccggcgga
ggcgacccagagaaccagaaccccagcggccaggttggacccgacggtgcggcgcaggct
gcggccgtcggagcgactcgccctgcggagcgacagtcctccagaccaaagaagaagaaa
gtgggcctgttccgatga
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