Xiphophorus couchianus (Monterrey platyfish): 114140620
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Entry
114140620 CDS
T05908
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2-like isoform X1
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114140620
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
114140620
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos2
Motif
Other DBs
NCBI-GeneID:
114140620
NCBI-ProteinID:
XP_027866530
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Position
24:20357769..20360438
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AA seq
266 aa
AA seq
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MEGEKKSPGCREEQLSLISWNIDGLDGDEQPERARSLCSYLTEYSADVVLLQEMVQPYMR
FMHRRLGDEYAFIEGGQDGYFTMMLLKKSRLRLLDHHIVNFPKSRMMRNLLIAQVEFGGQ
KLSLMTSHFESCKANSAERMRQLRQLMKMMSRAPDDQTVLFGGDTNLRDHEVAAVGLPGN
IVDLWEELGEPEKCRYTWDTRANTNKEIPFKCRFRFDRVYLRQAGVDGVPLLEPRSMALI
GLEKLRCGMFTSDHWGIYATFSVTHT
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggagggagagaagaagagcccaggctgcagagaggagcagctgtcgctgatcagctgg
aacatcgacggtctggatggagacgagcagccagagagagccaggagcctctgctcctac
ctcacagaatactcggctgacgtggtgcttctgcaggaaatggtgcagccctacatgcgc
ttcatgcaccgacgtctgggagacgaatacgccttcatagaaggtggacaggacggttac
ttcaccatgatgctgctgaagaagtcccgcctcaggctgctggatcaccacattgtaaac
ttcccaaagtctcgcatgatgagaaacctgctgattgctcaggtggagttcggaggccag
aagctgagtctgatgacgtcccactttgagagctgcaaggccaactctgcagagaggatg
aggcagctgaggcagctgatgaagatgatgagccgggctccggatgaccagacggttctg
tttggaggggacaccaacctgagggaccacgaggtagccgccgtggggcttcccgggaac
atcgtggacctgtgggaggagctgggagaaccggagaagtgccgttacacctgggacacc
cgggcaaacaccaacaaagaaataccgttcaagtgccggttccggttcgaccgggtgtac
ctccggcaggcgggtgtggacggcgtccccctgctggagccccgcagcatggcgctgatc
ggcctggagaagctccggtgtggcatgttcaccagcgaccactgggggatctacgccacc
ttctctgtgacgcacacataa
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