Xiphophorus couchianus (Monterrey platyfish): 114140667
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Entry
114140667 CDS
T05908
Name
(RefSeq) titin homolog
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xco00536
]
114140667
Glycosaminoglycan binding proteins [BR:
xco00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
114140667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
SAC9_C
EGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
114140667
NCBI-ProteinID:
XP_027866597
LinkDB
All DBs
Position
24:19051889..19073106
Genome browser
AA seq
3261 aa
AA seq
DB search
MFPVFLSNPDPSQDLADSDPLSFRMHSVLIRRKRNLLFPSGVKLCSQETFDQAVSNHLHF
FHLRVCQETVWEAFKIFWDRLPDRDEYQAWVNRCIDGSVSIKDIGSFFSQSEEHQSLIRS
RVELAAALNRSAPPVQTDPPAVWTLPGDNSVVFGSEAITVRQQELSPVTSWTPSLSATEA
PLKEAAATSPEDLTADPAADAVPEDSNDIQETVPIITSQSPAEVVRNVLNVGVTSEETVE
MITDVYHPVTHQPVGPVGQEIGTDAGRAEEEEQLLEITTEELNSVSVVIPEDEQLSTQLV
AQEILTEPAVVVLPKPTTPPTVEAFTPIVSPVVVEDTTGTTARSLVSPIQEEILDNSLGP
IPGVTLTETPREAVQESIVETAVFAPETDVSSGSDGEVDTSQVDDPSEAAVDVSQEEIGK
ETTPTVFLMVKSKDETEINEIPEQESDIAVPSQASIPMTTSKMEEVRQTTEMTVKPLLIV
EGETFQEIPTIRTMTPEETTKETVLVSTSTPEPVIEVETKPGSTVILTEGNMVEGETEAG
AKKESFQTEETTIKGTDSSEEQPEPLDKKFIEEEPGTESTGGSVEPKTSAEPKEQGGQDI
IEEPAPREETAHEPEPAGEAVQEGEPPGSVSREPEMVEKTAEDKTEPGDDTEPAEDRMVE
RPAHDLSLKLETLERAEPATELTFTGEITELPSEPTDQKVVKEQRTDLTGDSVPEPEATG
GPVQEISSTLGTKQKAEPTTKPPEETEPTPEMEITETVEAKATEPAVQFPQPTAEPTPDM
VIEPIKEAEEKTEAAGDLEKESEESEPTTKPSEPKLETATIEKTVEAKSPEPSQVPEFTT
EPSQEMDPIIDQEKEEEDSTRQLVEEDSDVKLKQEPVQEPDSTQKPGQEPKQIKESTQER
EPTIEPTEETTKDERPQPTRDPEKTTDSSTETAKGAEPTKEPAPEAEAVEEPPRAFEKPT
QDSLPIEKSVQEVGLIKETTHETKLTLKPAQEMDHTEEPTKTEPTREPGPKVETAEELLH
KTKLEQGVKETPASTEHPALVPEPTDFKDTSEEAVKIPPAKPTGEPTKELEPPIGAGYKE
EPSREPPQESEPCKDTKLGEEVPKESVPETEVPQETETTAEPTRQPAPGEPVGEPSGKIE
PTEGLEETDPHLRLDEDEAGVLPTPSDAAGEPFKVGDDRTSETSDKAVEETTGVPEELLV
PQTPEREVSPVTIEEDSKELPVTELEGTIGQDIVAGSPYGSEGETIKETTFHAVEPAIKV
TENVLEAEEPSETPTDVVTKDLLVTLSEEGSIKLPSEETVKTVVPEETTKSVIPEESVEA
VVPEKTTEIVVSEETTETVVHEGTTKTVVPEETTKTVVPEDTTKTVVPEETVETVVPEDT
TKTIVPEDTTKTIVPEDTTKTVVPEETVEAVVPEEMVEAVVPEDTTKTVVPEDTTKTVVP
EDTTKTVVPEDTTKTVVPGEMVETVVPEGTTEIVVREETVETVVPEETTKTVVPEGTTDT
VVPEETTNTVIPEETTETVVPEETTETVVPEETTETVVPEETTEIVVPEGTTETVVPEET
TETVVPEGTTETVVPEETTETVVPEGTTEIVVPEEMVETVVPEETTETVVPEGTTETVVP
EETTETVVPEETTKTVVPEETTETVVPEETTETVVPEGTTETVVPEETTETVVPEETTET
VVPEETTETVVPEETTETVVPEETTEIVVPEETTETVVPEGTTEIVVPEETVETVAPEET
TETVVPEETTETIVPEGTTETVVPEETTKTVFPEEMVETVVPEETTETIVPEGTTETVVP
EETTKTVFPEEMVETVVPEETTKTVVPEEMVETVVPEKRPSEDKVLPRENGTLMVLPPAN
KAPGVAEETTVETSTVGPTEEATTQSTTHSPKYVVETNNGNFPDVPVRPYVEQDIFLGNN
DFVEEEEDDNSIGNEIDGTLLRPPRPLKEYVVEQRIKLKGETFSNALRDTSSFQYQQLAK
QFKRRVEDVFDRLPGFKSLDIIEFRPQKDLQRGLVVQVHYAITLDLEVDSGGVSIDTLDF
ITLQNNQVEQSYVGAAEQPTVIYTITDFRNYITEALHKDNVLANGSLEHAGNAPPVKPTS
KPDEAYNNMDNILAAEKPPDAPIHEPDTSEVFLKKEDFLFDTRDQWKGPHSKEVSENDVF
LFDESTTAPQTVKVQKTVDLEPITKDEGGNIEGEGFLLTTSPSAVDDHQTVVPEGSAVTS
PPKPSEVTFDHGSGSGFSGDGQDSSLWSWEASETPDITYDRGVDSHEVLPPPDLEMDTDD
DVEPATSETADVLLVTTPRSGDSHTQEPLVGVFVAPLSTDTPDFTTPQLLLPSTEAAMTV
DLSVQTVEASGFHDDYSLIEPQTQTVPVTSSKTWTPTDSGTRHQTENMEEGMMGVTASDI
LEMKSEEVIVLDLPKAQTEAPLSLDLPAFVEVQGVTFGELSGETAAAGPEQPQVLTERPE
PPLPETRAPSEVEVLEEQHLGTTHSTTTAPSTGGLDQDLAVDEVIVVTTTTATPVPTLPP
ALEHSAALSPEKESPFTRVSDSVPEDEDLFHHEHQNHDEVTDVSTSSGSSDVFQSTPAEK
TPTDPGQGSLGASEQHMETTEPSGEEAGPPTMTSEPSEGIVKPLDEEDWPVKHEEPPKDK
ADPLDDAGVKPHGVESKVESSETETVPVKSEASGGDEQTPLEDLESTSLAEQPSSPSVFS
QGAGEDPDSPKGESVEVQPSGQELETSRPEEEFQPAEEQKEHFGGAVEPLGEPEPIEIKV
EPTGEVEVTPEEKIQPSGKGTESPVVHVEPSEGHSEEVQVSPSGEVKKEEEGERSGKEVA
PSHGNVEPEPSREVVTALLPTPSSSQPNVNDSSSVLDLGYDFSDMPSIDVSIDLFQYGSG
EADGESGGFSSEARGSDLEAFPLPGRPGRALTVFFSLRVTNMAFSRNLFNKSSSEYKSLE
QQFIQLLVPYLQSNLNNFQNLEILNFRNGSIVVNSRMRFGKPVPKEVTNIIYLILEDFAN
TAYHTMNLAIDKYSLDVESGDRADPCKFQACNEFSKCMVNQWSGEAECVCDPGYLSIDGL
PCQSVCDAQHNFCLNDGKCDIIPGKGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIAS
VVGFLLVAGGIIFFLARTLREQYDGEDSEDPLRRHESVPTLERATKFNPMFESDPVSAQY
YRRYEDSLPQYHQCCDSTLNQCCSKELTSEELQNICQNTALSKEEIQERLRIIELCSRDQ
RFADFVRQTQVFLERRGSSTT
NT seq
9786 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctgttttcctttccaatccagatcccagtcaggacctggcggattcggacccg
ctctccttcagaatgcactcggttctgatccgaaggaagaggaacttgctgtttcccagc
ggagtgaagctctgctcccaggagacgttcgaccaggccgtctccaaccacctccacttc
ttccacctcagagtgtgccaggagaccgtgtgggaggccttcaagatcttctgggaccga
ctcccggaccgggacgagtaccaggcctgggtcaaccgctgcattgacggatcagtcagc
atcaaggacatcggcagcttcttcagccaatcagaggagcatcagagcctcatcaggagc
agagttgaactggctgctgccttgaacaggtcggcaccgcctgtccagactgacccaccc
gccgtttggactctgccaggagacaacagtgtcgtctttggatcagaagctattacagtc
cgtcagcaggagctttctccagtcacctcttggactccatcgctgtctgcaaccgaagct
ccacttaaagaggctgcggcgacttctcctgaggatttaaccgctgaccctgctgctgac
gccgtgccagaagactctaatgatattcaggaaactgtaccgattattacttcacagagt
ccggccgaggtcgtcagaaacgttctaaatgttggagtcacttcagaggagactgtagag
atgatcacggatgtttatcacccggttacacaccagcctgttggcccggtgggtcaggag
atcgggactgatgccggcagagcagaagaagaagaacagcttcttgaaattactactgaa
gagttgaacagtgtgtctgtagtaataccagaggatgagcaactatcaacacagctggtt
gctcaagaaatcctcacagaacctgcggttgtggttcttccaaagcccaccacgccccct
actgtagaagccttcactccaattgtctctcctgttgtagttgaagacacgactggaaca
actgctaggagtttagttagccccatccaagaggaaatcctggataactctttaggtccc
atccctggtgttactttgactgagacacctagagaggctgtacaggaatccattgttgaa
actgcagtttttgcgcctgaaactgatgtttcttcaggttctgatggtgaggtagatacg
tcacaggtagatgatccatcagaggcagcagtagatgttagccaagaagagatcggcaaa
gagacgacaccaactgtgtttctgatggtaaagtctaaagacgagacggaaatcaacgag
attccagagcaagaatcagacatagctgttccctctcaggcctccatcccaatgactacc
agcaagatggaggaagtaagacaaactactgagatgacagtcaaacctctacttattgta
gaaggagagacttttcaagaaatcccaacaatacggacaatgacacctgaggaaactacc
aaagaaactgttcttgtttcaacatcaacaccagagcctgtgatagaggtggaaacaaaa
cctggaagtactgttatacttacagaaggtaatatggtggaaggagaaacagaggctggt
gctaaaaaagaaagttttcagacagaagagaccactatcaagggaacagattcatcagaa
gagcagccggaaccattggacaagaagttcattgaagaggaaccagggacggaatctaca
ggtggttctgttgaacctaaaacatctgcagaacccaaagaacaaggtggacaagacatt
atagaagaaccagcacccagagaagaaactgcacatgaaccagaacctgcaggagaagca
gtacaggaaggagaacctccaggaagtgtttcaagggaaccagaaatggtagaaaaaaca
gcagaagataaaacagaaccaggagatgacacagaacctgcagaagaccggatggttgag
agaccggcacatgacctgtcactcaagttagaaactcttgagagagcagaacctgcaaca
gagttgactttcacaggagaaattacagaactaccctcagaaccaacagatcagaaagta
gtcaaagaacaaagaacagaccttactggagattcagtaccagaacctgaggccacaggc
ggaccagtccaagaaataagctccacgttagggacaaaacaaaaagcagaaccgaccaca
aaaccaccagaagagacagagccaactccagaaatggaaatcacagaaacggtggaagca
aaagcaacagaacccgcagttcagtttccacaacccacagcagaaccaacaccagatatg
gtcatagaaccaataaaggaagcggaagaaaaaacagaagctgctggagatctagaaaag
gaatctgaagaatcagaaccaaccactaaaccatcagaacccaaacttgaaactgcaacc
atagaaaaaacagttgaagcaaaatcccctgaaccatcacaggttccagaatttacaacg
gagccttcacaagaaatggatcccatcatcgatcaagagaaagaagaagaagactctaca
agacaattggtagaagaggattcagatgtaaaactgaaacaagaaccagtgcaagaacct
gactcaacacagaaaccaggccaagaacccaaacaaattaaagaatcaactcaagaaaga
gaaccaaccattgaacccacagaagaaacaaccaaagatgaaagacctcaacccacaaga
gatccagaaaagacaacagactcctccacagagacagcaaaaggagcagaacccaccaaa
gaacccgctccagaagcagaggctgtggaagaaccgcccagagcctttgagaaaccaaca
caagattctttacccatagaaaaatcagttcaagaggttggactcattaaagaaacaaca
catgaaaccaaattaacccttaaaccagctcaagaaatggaccacacagaagaaccaact
aaaacagaacctacaagagaaccaggccccaaagtagaaactgctgaagaacttctacac
aaaacaaaacttgaacaaggagtcaaagaaactccagcatccactgaacacccagcatta
gtgccagaaccaactgattttaaagatacctctgaagaggcagtaaaaataccaccagca
aaacctactggagaaccaactaaagaattggaacctcccataggagcaggatacaaggaa
gaacctagcagagaaccaccacaagaatcagaaccatgtaaagatacaaaactgggagag
gaagtccccaaggaatctgtaccagaaacagaggtcccccaagagactgagacaacagca
gaaccaacaagacaaccagcgccaggtgaacctgtaggagaaccttctggtaaaatagaa
ccaacagaaggacttgaagagactgatcctcatttaagacttgatgaagatgaagctggt
gttcttccaacaccttcagatgcagcaggggaaccgtttaaggttggagacgacagaacc
tctgagacgtcagataaagcagttgaagaaacaacaggtgttccagaggagttgttagta
ccacagactcctgaaagagaagtgagtcctgtaactatcgaagaagactcaaaagagtta
cctgtgactgagttggagggaactattgggcaagacatagtggctggatctccatatggt
tctgaaggcgaaaccatcaaagaaactactttccatgcggttgaacctgcgatcaaagtg
actgaaaatgttcttgaagctgaagaacccagtgaaacacctacagacgttgttaccaaa
gaccttctagtgacactatcagaagaagggtccatcaagcttccttctgaggaaactgtc
aagactgtcgttcctgaggaaacaaccaagtctgtcatccctgaagaatcggtggaggct
gtagtccctgagaaaacaaccgagattgtcgtttctgaggaaacaactgagactgtcgtc
catgaaggaacaaccaagactgttgtccctgaggaaacaaccaagactgtcgtccctgaa
gacacaaccaagactgtcgtccctgaagaaacggtggagactgtcgtccctgaagacaca
accaagactatcgtccctgaagacacaaccaagactatcgtccctgaagacacaaccaag
actgtcgtccctgaggaaacggtggaggctgttgtccctgaagaaatggtggaggctgtt
gtccctgaagacacaaccaagactgtcgtccctgaagacacaaccaagactgtcgtccct
gaagacacaaccaagactgtcgtccctgaagacacaaccaagactgtcgtccctggagaa
atggtggagactgtcgtccctgaaggaacaacggagattgttgtccgcgaagaaacggtg
gagactgtcgtccctgaagaaacaaccaagactgtagtccctgaaggaacaaccgacact
gtagtccctgaggaaacaaccaacactgtcatccctgaggaaacaaccgagaccgtcgtc
cctgaggaaacaaccgagactgtcgtccctgaggaaacaaccgagactgtcgtccctgag
gaaacaaccgagattgtcgtccctgaaggaacaaccgagactgtcgtccctgaggaaaca
accgagactgtcgtccctgaaggaacaaccgagactgtcgtccctgaggaaacaaccgag
actgtcgtccctgaaggaacaacggagattgtcgtccctgaagaaatggtggagactgtc
gtccctgaggaaacaaccgagactgtcgtccctgaaggaacaaccgagactgtcgtccct
gaggaaacaaccgagactgtcgtccctgaggaaacaaccaagactgtcgtccctgaggaa
acaaccgagactgtcgtccctgaggaaacaaccgagactgtcgtccctgaaggaacaacc
gagactgtcgtccctgaggaaacaaccgagactgtcgtccctgaggaaacaaccgagact
gtcgtccctgaggaaacaaccgagactgtcgtccctgaggaaacaaccgagactgtcgtc
cctgaggaaacaaccgagattgtcgtccctgaggaaacaaccgagactgtcgtccctgaa
ggaacaacggagattgtagtccctgaagaaacggtggagactgtcgcccctgaggaaaca
accgagactgtcgtccctgaggaaacaaccgagactatcgtccctgaaggaacaacggag
actgtcgttcctgaggaaacgaccaagactgtcttccctgaagaaatggtggagactgtg
gtccctgaggaaacaaccgagactatcgtccctgaaggaacaacggagactgtcgttcct
gaggaaacgaccaagactgtcttccctgaagaaatggtggagactgtcgtccctgaggaa
acaaccaagactgtcgtccctgaagaaatggtggagactgtcgtcccagagaaacgtccc
tctgaggataaggttttaccaagagagaacggtaccctaatggttctcccaccagctaac
aaagctccaggtgtagcagaggaaactacagtagaaacatcaacagtgggacctaccgag
gaggcaaccactcagtccacaacacactctcctaagtatgtagtggaaaccaacaatgga
aactttccggatgtaccagtccgaccctacgtagaacaagacatctttttggggaacaat
gactttgtggaggaggaagaggatgataactcgattggtaatgagatagacggcacgctg
ctgcgacccccgcgacccctgaaggagtacgtggtggagcagcggatcaaactgaaggga
gaaaccttcagcaacgccctgagagacaccagcagcttccagtaccagcagctggccaag
cagttcaaacgcagggttgaagacgtcttcgacaggctgccaggcttcaagagccttgac
ataattgaattcaggcctcagaaggacctgcagcggggtctggtggtgcaggtccactac
gccatcactctggacctggaggtggacagcggtggggtctccatcgacactctggacttc
atcactctgcagaataatcaggtggagcagagctacgttggagctgctgagcagcccacc
gtcatctacacaatcactgatttccgtaactacatcaccgaagctctgcacaaagacaac
gtcctggccaacggcagcctggaacatgcagggaacgctcctcctgtgaaacctacaagt
aaaccggatgaagcttacaacaacatggataacattctggctgcagagaaacctcccgat
gcgccgatccatgagccagacaccagcgaggttttcctgaagaaggaggacttcctgttt
gacaccagggaccagtggaaaggtccacacagtaaggaagtgagtgaaaacgacgtcttc
ttattcgatgaaagtacaacagcaccacagaccgttaaagtccaaaagactgttgacctg
gagccaataactaaagacgagggtggaaacattgaaggtgagggattcctcctcactacg
tctcccagcgctgtggatgatcaccagacggtcgttcctgaaggatcagcagtcacttca
cctccaaaaccctctgaggtcacgtttgatcacggatctggatctggtttctctggagat
ggtcaggattcttctctctggtcttgggaggcttcagaaacacctgacatcacctatgac
cggggggtcgacagccatgaagtcctaccaccacctgacctggagatggacacggatgat
gatgtggaaccagcaacctctgaaacggctgatgttttactggtgacaacccccaggtct
ggtgactctcacacccaggaacctctggttggcgtctttgtggcgccactgagcacagac
acaccagacttcaccacacctcaacttcttctaccttcaactgaggcagccatgactgtg
gacctttctgttcaaacagtggaagcatctggtttccatgacgactattctctgattgag
cctcagacccaaacagttcctgttacatcctctaaaacctggactccaactgattctggc
accaggcatcaaactgaaaacatggaggaagggatgatgggggtcactgcgtcagatatc
ttagagatgaaaagtgaagaggttattgtgcttgatttaccaaaagcccagactgaagct
cctctcagtctggacctgcctgcatttgttgaagtgcagggggtcacatttggtgaactc
agcggtgaaacagccgctgctggtccagaacagcctcaggtcctgactgagagacctgag
ccgcccctcccagaaacaagagcacccagtgaggttgaggttttggaggagcagcattta
ggaaccactcactccactacgacagcaccctctactggaggtctggaccaggacctggct
gtggatgaagtcattgttgtcactacaaccacagcaactccagtcccaactttaccccca
gccttggagcacagcgctgcgctctcccctgaaaaggagtcgcctttcactcgagtctct
gattcagtgccagaagatgaggatctctttcaccacgagcatcaaaaccacgacgaggtc
actgatgtttccacaagctccggttcttcagacgtttttcagtcgacaccagcagaaaag
actccaactgatcctggacagggatcgctgggtgcttcagagcaacacatggagacaacc
gaaccttcaggagaggaagcaggacctcctacaatgacaagtgaaccttctgagggaatt
gtaaaacctttggatgaggaagattggcctgttaaacatgaagaacctccaaaagacaaa
gctgaccctctggacgatgccggagtcaaacctcatggagtggaaagcaaagtagaatcc
tcagaaactgaaactgtgccagtgaagagtgaagcttctggtggagacgagcaaactcct
ctggaggatttagagtctacatcactggcagaacaacccagttctcccagcgtcttctcc
cagggagctggagaagaccctgactctccaaaaggagaaagtgtggaagtgcaaccttca
ggacaggaactggagacctctagacctgaagaagaatttcaacctgctgaagaacaaaaa
gaacattttgggggagcggtagaacctttaggagaacctgaaccaatagaaataaaagta
gaacctactggagaagtagaagtaactccagaggagaaaattcaaccttctggaaaagga
accgagtctccagttgtgcatgtggagccttctgaaggacattctgaagaggtgcaagtg
tcaccttctggagaagtaaagaaagaagaggaaggagaacgttctggaaaggaagtggct
ccttcacatgggaacgtggaaccagaaccttccagagaagtagtcactgctctccttcca
acaccgtcttcctcacaacccaacgttaacgacagctcttctgtcctcgaccttggctac
gacttctctgacatgccgagtatcgatgtgagcatcgacctgttccagtacggctctggg
gaagctgatggcgaaagcggtggcttctccagtgaagctcggggttcagaccttgaagct
tttcctttgccgggccggccgggcagagctctgaccgtgttcttcagcttgagggtcacc
aacatggcattctccaggaacctgttcaacaaaagctcctcagagtacaaatctctagaa
caacaattcatacagctgctggtcccgtacctccagtccaatctgaacaacttccagaac
ctggagatcctgaacttcagaaacggcagcattgttgtaaacagcagaatgcgttttggc
aaaccggttcccaaagaagtcaccaacatcatctacctgattctggaggactttgccaac
acggcctaccacaccatgaacctggccatcgacaaatactcactggatgttgaatcaggt
gaccgggccgatccctgcaagttccaggcctgtaacgagttttccaagtgcatggtgaac
cagtggtctggagaggcagagtgtgtgtgtgatcctggatatctgagcatcgacggcctg
ccgtgtcagagcgtctgtgacgctcagcacaacttctgcctcaacgacggcaaatgtgac
atcattcctggcaagggcgccatctgcaggtgtcgtgttggggagaactggtggtaccgc
ggtgagcactgtgaggagtacgtctctgagccgctggtggtcggcatcgccatcgcctcg
gtggtcggcttcctgttggtggctggaggaatcatcttcttcctggccagaacgctcaga
gagcagtatgatggtgaagactcagaggatccactcagacggcatgaaagcgttccaact
ttggagcgagccaccaagttcaacccgatgtttgagagcgacccggtctctgctcagtac
taccggcgctacgaagacagcctgccccagtaccaccagtgctgcgactccaccctgaac
cagtgctgctccaaagaactgaccagtgaagaactacagaacatctgccagaacacggct
ctctccaaagaggagatccaggagcgtctcagaataatcgagttgtgctccagagatcag
cgctttgcagactttgtccggcaaacgcaagtattcctggagaggagaggaagctccaca
acgtag
DBGET
integrated database retrieval system
