Xiphophorus couchianus (Monterrey platyfish): 114140711
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Entry
114140711 CDS
T05908
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114140711
Peptidases and inhibitors [BR:
xco01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
114140711
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GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
114140711
NCBI-ProteinID:
XP_027866639
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Position
24:complement(1568831..1611354)
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AA seq
1202 aa
AA seq
DB search
MVPSLHWLLLLWRLQAVWAQDYEEYEDEVVTTRRKNKLLTPNSIPQNGKSSIDEDCSLEL
AFLVDSSESAKDNHDQEKRFVSDVMDRLQGLRLESGRGLSSRAALLQYSSQVKIEQTFRD
WRGIENFKARVAPIQYIGHGTYTTYAITNLTRIYLEESGTKSIKVAVLLFDGISHPRNPN
IFDAVDDARNQGVRFFTIGITPEANEATNIAQLRRIASSPATRYLHNLQDVGIVDKVIKE
ITALAEEGCPLELNPCKCDKGDRGPSGPAGKKGRPGDDGSPGAKGQKGESGLSGLPGREG
AEGKSGYKGEKGERGECGTPGVKGDRGPEGVIGPRGNRGLQGLPGPLGDVGPEGIMGKKG
ERGLPGPPGIQGETGIGLPGSKGDVGFQGQPGPPGPTGIGEPGPPGPQGPQGVQGERGPT
GEGIPGPKGERGIEGPRGPRGQPGLGIKGDKGDFGPPGFPGPLGLPGLGIQGEKGTEGPR
GPPGIRGPPGEGFSGPKGDQGLPGEVGAPGERGAGEPGAKGEPGSPGLSGLPGLPGEDGA
PGQKGEPGAVGLRGPEGSPGIGTQGEKGDQGQRGIRGLTGPPGIAGPSGPKGEPGSQGRP
GSAGPPGRFITGPKGDPGPGGPPGPIGETGFGLPGPKGDRGDSGPAGPFGPKGDGYPGPM
GPPGLPGLPGEPGSEGVGFPGPKGDIGFRGPPGLPGPPGEGVQGPLGNPGRPGPPGPAGP
QGLGLQGPKGEQGAQGVTGPRGVPGEGFPGAKGDRGSSGERGLKGFKGEIGDSGIPGQPG
LPGIKGEAGLTREDIIRMIKEICGCGIKCKEKPMELVFVIDSSESVGPDNFEIIKRFVTT
LVDRVTVGRNATRIGLILYSLEVKLVFNLARYNTKEDIKEAIRNIPYMGEGTYTGTAIRK
ATQEAFYSSRLGVSKVAIVITDGQTDKREPVKLDIAVREAHAANIEMFALGIVNTSDPTQ
ADFLRELNLIASDPDSEHMFLIDDFNTLPALESKLVSQFCEDENGALIYNRITNGYNGNN
GYNGNRITGSYATGGYGYKPITQQDHLSGQQAGVGTHSKGSSTVHGGGGQRVTTVITTSG
SERGDTFNRGTSDYKTPPPARGGSSSSSSSSTNISISSSGVSVSYVPPPRPALPKETVPL
DPRCGLVLDQGTCREYNIRWYYDKQANACAQFWYGGCGGNRNRFDTEEECKRTCVVSRVT
GG
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggttccctctctgcactggctgctcctgctgtggagacttcaggctgtgtgggctcaa
gactatgaagaatatgaagatgaggttgtgaccacaaggaggaaaaacaaactcctcaca
ccaaattccataccacagaatggcaaatcttctatcgatgaagactgcagtttggagttg
gccttcctggtcgacagctcagagagcgccaaggacaaccacgatcaggagaaacgtttt
gtttccgacgtaatggaccgactgcagggcctccggctggagagtggccgcggactcagc
tcccgtgcggccctccttcaatacagcagccaggtcaagatagagcagaccttccgagac
tggaggggcattgaaaacttcaaagccagagtcgctcccattcaatacataggccacggc
acctacaccacctacgccatcaccaacctgacgcgcatttacttggaggagtcaggcacc
aaaagcatcaaggtggccgtcctgctctttgacggcatctcgcacccaaggaacccaaac
atatttgacgctgtggacgatgcgaggaaccaaggcgttcggttcttcacaataggaatc
acacctgaagccaatgaagcaaccaacattgcacagctgcgtcgaattgctagttcccca
gctacccgctaccttcacaatttgcaagatgttggcattgtggataaggtcatcaaggag
attacagcgctggcagaagaaggttgtccactcgaattgaacccgtgcaaatgtgataaa
ggtgacagaggacccagtggccctgcgggcaagaaaggacgtcctggagatgatggaagc
cctggcgcaaagggacagaagggtgaaagtggtctcagtggacttccaggccgcgaagga
gccgagggtaaatcaggatacaaaggagagaagggagagagaggagagtgtggcacacca
ggcgttaaaggagacagaggccctgaaggtgttattggtccaagaggaaaccgtggactt
cagggtttgccaggtccactgggtgatgtgggacctgaaggaatcatgggaaaaaaaggg
gagcgggggcttcctggaccacctggaatccaaggtgagactgggatcggccttccggga
tcaaagggggatgttggtttccaggggcaaccggggcctcccggccctacggggatcggc
gagcccggaccaccgggtcctcaggggccacagggagtccaaggagagagaggaccgaca
ggagaaggtatccctggtcctaagggtgagcgaggcatagaggggccgcgggggcccaga
ggacagccgggcctaggaatcaaaggagacaagggggattttggccctccagggtttcca
gggcccctgggccttccaggtctaggcatccaaggagaaaagggaacagagggccccagg
gggccacctggaataagaggccccccaggagagggcttttctggacccaagggagaccaa
gggctgccaggagaagtgggggctccaggagaaagaggagctggtgagcccggtgctaag
ggtgaaccaggatcaccaggactgtcaggtttgcctggacttcctggagaggatggagct
ccaggacaaaagggtgaaccaggagccgttggtcttagaggtccagaaggttcgcctggg
attggcactcagggagaaaagggtgaccaaggccaaagaggaataagagggttgacaggt
ccgcctggcattgctggaccctcaggaccaaagggagaaccagggtcacagggacggccc
ggttccgctggaccgccgggacgtttcatcaccggacccaagggcgatcctggaccaggt
ggacctcctggtccaatcggcgagactggctttggactgcctggcccaaagggcgatcga
ggtgactcgggccccgcaggtccatttggccccaaaggagacggctatcccggccccatg
ggtcctcctggtctgccggggcttcctggagaacccgggtcagagggcgtgggcttccca
ggaccaaagggggacattggattccgagggccgccaggtttacccggacccccaggggaa
ggcgtccagggacctttgggtaaccccgggcgaccaggtccacctggcccagcagggcca
cagggactaggacttcaaggccccaagggtgaacagggggcccagggtgtgacaggaccc
agaggtgtacctggggagggctttccaggagccaaaggtgaccggggctcatcaggagag
agggggcttaaaggattcaagggagaaataggagattcgggaatcccagggcaacctggt
cttccgggcataaaaggggaagcaggcctcactagagaggacatcattcgaatgatcaaa
gagatctgtggatgtgggatcaagtgcaaggagaagcccatggagttggtgtttgtcatt
gacagctcagagagcgtggggcccgataactttgagatcatcaagcgtttcgtgaccacg
ctggtggatcgggtcacggtaggccgcaacgccacaaggatcggtttgatattgtacagc
ttggaggtgaaattggtgttcaacttggcccgctacaacaccaaagaggacatcaaggag
gccatcaggaacatcccgtacatgggtgagggcacctataccgggacagccatccggaaa
gccacccaggaggccttctatagctcccgcctcggcgtcagcaaggtggccattgtgatt
actgacgggcagacggacaaacgggagccggtcaagctggatatagccgtgcgggaagcc
cacgctgccaacatcgagatgttcgccctggggattgtgaacacgtcagatccaacacag
gccgacttcctgagagagctcaacctgatcgcgtcggacccggacagcgagcacatgttc
ctgatcgatgacttcaacactttgccagctctcgagtccaagctggtcagtcagttctgt
gaggacgaaaacggagccctgatatacaaccggataacaaacggctacaacggaaacaac
ggctacaacggcaacaggatcactgggagctacgccaccggtggctatggttacaagccc
ataactcagcaggaccatctcagcggccagcaggctggtgttggcacccacagtaaagga
tccagcactgttcatggtggaggagggcaacgtgtaaccacagtgataaccacctcagga
agtgaacgcggggacacgtttaaccgcggcacctccgactacaaaactccgcctcctgcc
agagggggctcatcttcctcatcttcatcttctacaaacataagcatatcatcttcaggt
gtttctgtgtcgtacgttcccccgccaaggccagctctgcccaaagagaccgtacccctg
gaccctcgctgcgggctggttctggaccagggaacatgtcgagaatataacatccgctgg
tactacgacaagcaggccaacgcttgcgcccagttctggtacggaggctgcggcggcaac
aggaaccgcttcgacaccgaggaggagtgcaagagaacatgtgtggtctccagagtcaca
ggaggctga
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