Xiphophorus couchianus (Monterrey platyfish): 114140746
Help
Entry
114140746 CDS
T05908
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114140746 (ddx4)
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114140746 (ddx4)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Gene silencing
piRNA pathway
114140746 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114140746
NCBI-ProteinID:
XP_027866727
LinkDB
All DBs
Position
24:5150905..5157154
Genome browser
AA seq
639 aa
AA seq
DB search
MDEWEEEENKATTFTAASYSSNDAAGRDSWKSEHGEFGRGRGGKGRGRGGFWNSSADGDS
RESNEDGERHGFSGRGGRGRGRGFNRMNSDSLSEDGDGAHENGFRGRGRGGRGGRGGFRQ
DAEQGGRGGFGGGYRGKDEETFNPGEDKGSVKDDPDSDKPRVTYVPPTLPEDEDSIFSHY
KSGINFDKYDDILVDISGTNPPRAIMTFDEAALCESLRKNISKSGYVKPTPVQKHGIPII
SAGRDLMACAQTGSGKTAAFLLPILQQLMTDGVAASRFSETQEPEAVIVAPTRELINQIY
LEARKFAYGTCVRPVVVYGGVSTGHQIREILKGCNVVCGTPGRLLDMIGRGKVGLSKVRY
LVLDEADRMLDMGFEPDMRRLVGSPGMPSKENRQTLMFSATYPEDIQRMAGDFLKLDYLF
LAVGIVGGACSDVEQKFVQVTKFSKREQLLDILKTTGTERTMVFVETKRQADFIAVFLCQ
EKVPTTSIHGDREQRERELALTDFRSGKCPVLVATSVAARGLDIPDVQHVVNFDLPKDID
EYVHRIGRTGRCGNVGRAVSFFDPEVDGGLARSLVTVLSKAQQEVPPWLEESAFSSHGAG
FNPRKTFGSTDSRKTGSFQESSGKSQAAAQAAADDEEWE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtgggaagaagaggaaaataaagcaactacatttacagcagccagctattcc
tctaatgatgcggcaggaagagactcatggaaaagtgaacatggtgaatttggacgaggt
cgagggggcaaagggagaggcagaggaggattttggaactccagcgcagacggagacagc
agggaatctaacgaagacggggaaagacatggtttcagtgggagaggaggtcgagggcgt
ggccgaggattcaacaggatgaactcagacagtctctctgaggatggtgatggagctcat
gagaatgggttcagagggcgaggaagaggaggtcggggaggaagaggaggattcagacaa
gatgctgagcagggaggaagaggaggctttggtggaggttaccgtggaaaagacgaagag
accttcaatccaggagaagacaaaggttcagtcaaggacgaccctgatagtgacaaaccg
agagtcacatacgttcctccaacgctccctgaagacgaagactccatcttctcccattat
aagagtggaatcaactttgacaagtacgacgacatcttggtggacatcagcggcaccaac
ccccccagggccatcatgacctttgacgaggcggccctgtgtgagtccctgaggaaaaac
atcagtaagtctggctacgtgaagccgaccccggtgcagaagcatggcatccccatcatc
tctgcaggcagagacctcatggcctgcgcacagactggctctgggaagacggctgctttc
ctgctgcccatcctgcagcagctcatgacggacggcgtggcggccagtcgcttcagtgag
acacaagaacccgaagccgtcatagtcgctccaaccagagaactcatcaaccagatctac
ctggaggctaggaagtttgcttatgggacgtgtgtccgacctgttgtggtctatggagga
gtcagcactggacaccagatcagggaaatcctgaaaggatgtaacgtggtgtgtggaact
cctggacgtctgctggacatgattgggagaggaaaggtgggactgagtaaggtgcggtac
ctggtgctggacgaggccgaccggatgttggacatgggctttgagccagacatgcggcgc
ctggttggctcccctgggatgccgtccaaggagaatcgtcagactctaatgtttagcgcc
acctaccctgaagacatccagaggatggctggtgacttcctaaagctggattatctgttc
ctggctgtgggcattgtgggcggagcctgcagcgacgtggaacagaagtttgtacaagtc
accaagttctccaagagagagcagctgcttgatatcctcaaaaccacaggaacggagcgt
accatggtgtttgtggagaccaagagacaagcagacttcatcgctgtgttcctgtgccag
gagaaagttccaaccaccagcatccatggtgaccgagagcagagggaacgggagctggct
ctgacagatttccgctctgggaaatgtcctgttctggtggccacctctgtagctgcccgt
ggtctggacattccagatgttcagcatgtggtgaactttgacctcccaaaggacatcgac
gaatacgtccatcgtattgggagaactgggcgctgtgggaacgttgggagagccgtgtca
ttctttgacccagaggttgacggggggttggcccgctccctagtgacggttctgtccaag
gcgcagcaggaagtgccgccttggttagaggagtctgccttcagcagccacggcgccggc
ttcaaccccaggaaaacattcggctccacggattccagaaagacgggctccttccaggag
agcagcgggaagagccaggctgctgctcaggctgcagctgatgacgaggaatgggagtga
DBGET
integrated database retrieval system
