Xiphophorus couchianus (Monterrey platyfish): 114140890
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Entry
114140890 CDS
T05908
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114140890 (gtf3c3)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
114140890 (gtf3c3)
TFIIIC, fungi type
114140890 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_8
TPR_1
TPR_14
TPR_19
TPR_17
TPR_7
TPR_CcmH_CycH
TPR_12
TPR_6
TPR_11
TPR_9
ANAPC3
ARM_TT21_5th
TPR_10
TPR_Slam
PknG_TPR
HAT_PRP39_C
TPR_21
FXMRP1_C_core
Sel1
Motif
Other DBs
NCBI-GeneID:
114140890
NCBI-ProteinID:
XP_027866985
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All DBs
Position
24:70878..93649
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AA seq
921 aa
AA seq
DB search
MSGFSAELIDYLEGRITFEEFDRRRDERKAEDSEEFTEDENKPSTSAQTKATIEDGVSPG
VQQAFASILGETAAVASSEEEDSLSYVDDKDDRDFNVEEEEEAKGVTKERKRRLRQGGKR
GLKSKLEEEEEDMTVGDVFKLEMELNRENRRLMKGRRHGSKLPQALRGLMGEANIRYARG
EKEDAILMCMEIIRQSPLAYEPFSTLAMIYEDNGDVDKALQFGLIAAHLNPSDCEEWIRL
ADMSLEQDNVRQAIICYTKAIKYDPTNVRYLWERSSLQMRLGEHKQCMDGYRKILSLLPQ
EDGEHFMQLSKDMAKNYYESNDLPSALSVIEEGLARHPGLVSDDFLNMAAELYICNRQYK
KTLQVLVKFADIVLIRAESLSESSALSLKDMGTEEQQKEGEKGTKSNTVEDNDEILDVQV
PDSVPVDLRAKLIVCLIQLNVFTPSEGLVSTLMEQSPEEIGDLYLDVAEAYLEQGRYTSA
LPLLSALVISEKYDLAVVWLRHAECLKALGHMKEAAESYTKVVEMAPLHLEARLSLATVQ
QQLGRMDCALKALESMYDSDTLAQDSSAAQKELKLLLHRSTLLKTQGKMEDYLDAMITMI
SMLLKVAMQRAKVCVRSVTLAGQNHLKLVKIEDMLPEIADHESAYLDNMCKTNVLSKEDW
WQLLLSCLLGLCDLQRYEEVDLLVESAMEFYSFYDNKPRRKELEFFGLSATVLNQNYYKA
YNYIRLMLIENVDLPQFWNIFHQLTISSQHQRHHRFCLRLLLKHPDNHALCVLCGHNAMV
SGSFKHALGQYIQALKTHPENPLHSLYVGLTFFHMASQKYVAKRHALVLQGFSFLWRYVE
LRGACQESMYNLGRALHQMGLTHLAIHYYQKALLLPAWKLDGISGDQVDLRREIAFNLSL
IYQASGNTEMARQLIRTHCTI
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggttcagcgcagaactaatcgactatctggaaggtagaataaccttcgaagag
tttgacagacggagagacgaacggaaagcggaggactcagaggaatttacagaagatgaa
aacaaaccttccacctcggcacaaacaaaagctactattgaggatggagtcagcccagga
gtacagcaagcctttgcttccattctgggggaaacggcagcagtggcatcttcagaagag
gaggacagcttgagctatgttgatgacaaagatgatagggatttcaatgtggaggaagaa
gaggaggcgaagggagtgaccaaagagaggaagaggaggctgaggcaaggaggcaaaaga
ggcctgaagagcaagttagaggaggaggaggaggacatgacggtgggagacgtgttcaag
ctggagatggagctgaaccgagaaaacagaaggttgatgaaggggcgtcgtcatggcagc
aaactgcctcaggctctcagggggctgatgggagaggccaacatccgttacgctcgtggg
gagaaagaggatgccatcttgatgtgcatggagatcataagacaatctcctctggcctat
gagccattctccactctggccatgatatatgaggacaatggagatgtggacaaagcgctg
cagtttgggctcatcgctgcccacctcaacccttcagactgtgaggagtggatccgactg
gccgacatgtctcttgagcaggacaacgtccgacaggccatcatctgctacaccaaagcg
atcaagtatgatcccaccaatgtccgctacctgtgggaacgctccagcctccagatgcgc
ttgggggagcacaagcagtgcatggacggctaccgcaagatcctgtctctgctgcctcag
gaggatggggagcacttcatgcagttgtccaaagacatggctaagaattactatgagagc
aatgacctgccctcagcactgagtgtgatagaggaaggtctggcccgacaccctggcttg
gtcagcgatgacttcctcaacatggcagctgagctctacatttgcaaccgccagtacaag
aagaccctgcaggttctggtcaaatttgcagacattgtgttgattcgagcagagtcccta
tcagaaagctcagctctgtctttgaaggacatggggacagaggagcagcagaaggaaggg
gaaaagggcacaaagtcaaacactgtagaggacaacgatgaaattctggatgttcaggtt
ccggacagtgtcccagttgatctcagggccaagctcattgtctgcctcatacagctaaat
gttttcacaccgtctgagggcttagtgtcgactttgatggagcagagtccggaggagatt
ggggacctgtacctggacgtggctgaagcttacttggagcagggacgctacacgtctgct
ctgcctttactatcggccctcgtcatctctgagaagtacgacctagctgtggtctggctg
cggcacgcagagtgtcttaaggctctgggccacatgaaggaggcagcagagagctacacc
aaggtggtggagatggccccgctgcacctggaggcccggctgtctctcgccacggtgcag
cagcagctggggcggatggactgtgctctgaaagcattggagtccatgtacgatagtgac
acgctggcccaggattcgtccgctgcacagaaggaattgaagctgctgctgcatcgctcc
acactgctaaagacgcagggtaaaatggaggactatctggatgctatgatcaccatgatc
tccatgcttctcaaggttgctatgcaacgtgccaaggtgtgtgttcgttctgtaactcta
gcaggacagaaccacctgaaacttgtgaagattgaagacatgctgccagaaatcgccgac
catgaaagtgcctatctggacaacatgtgtaaaaccaacgttttatccaaagaggactgg
tggcagctgttgctgagctgcctgctggggttgtgtgacctgcagcgttacgaggaggtg
gatctcctcgtggagtcggccatggagttctactccttctatgacaacaagcccaggagg
aaggagctggagttctttggcctctctgccaccgtcctaaaccaaaactattataaggca
tacaactacatcagattaatgcttatagaaaatgtagatctacctcagttttggaacatt
tttcatcagctgacaatatcgtcccagcaccagcgccaccaccgcttctgtctacggctg
ctgttaaagcatcctgacaaccatgcactgtgtgttctctgcggacacaacgccatggtg
tctggaagcttcaagcatgctctgggacagtacattcaggctttaaaaacccacccggaa
aacccactgcacagcctttatgtgggtctcacttttttccacatggcatcccagaagtat
gtagccaaacgtcatgctttagtactgcagggattttccttcttgtggcgatacgtggag
ctgcgtggagcgtgtcaggagagcatgtacaatctgggccgagcactgcaccagatgggc
cttacacacttggccatacattattaccaaaaggcgctgttgctacctgcatggaaactg
gatggaatttcaggagatcaggttgatttgaggagagagattgcttttaacttatcactc
atctatcaggccagtgggaacacggagatggcgcggcagctcatcagaactcattgcact
atatga
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