Xiphophorus couchianus (Monterrey platyfish): 114140896
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Entry
114140896 CDS
T05908
Symbol
nfatc2
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04020
Calcium signaling pathway
xco04148
Efferocytosis
xco04218
Cellular senescence
xco04310
Wnt signaling pathway
xco04370
VEGF signaling pathway
xco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114140896 (nfatc2)
04370 VEGF signaling pathway
114140896 (nfatc2)
04020 Calcium signaling pathway
114140896 (nfatc2)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114140896 (nfatc2)
09143 Cell growth and death
04218 Cellular senescence
114140896 (nfatc2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
114140896 (nfatc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114140896 (nfatc2)
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
114140896 (nfatc2)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
114140896
NCBI-ProteinID:
XP_027866991
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Position
24:complement(9389421..9417957)
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AA seq
893 aa
AA seq
DB search
MTSFYDEKDLEEDLSRANCPDEDLQFEYLFEYEPPCSDFAGDQDDPGLASHKVLRPESEQ
VFPLDEQYRIKSCNSPYSNLNPEVLSGYGNQEARNYLDNTRPPGLALSPRIEITPSREHY
SHGRDSLPNQHLNLSPRPTLTVPGHESLAYREPQCLSPASSNSSTSWHSESYSPWASPCV
SPSSGPNPADLCPRMQNIHTCSPRTSPGTSPHTSLGEDGGLGARSPSPRPRSTSPQGKRT
YEMYRNPGLIPGQRSRSPSPHSGQENPNTGAHFAHVVEGVNGFGSSQPGMVPTKIVKTSN
QLYALIPENHGDGNYCDQDIKTKPSAEPFYVIPSIWPKPLVPNLCSLPLTTAPPLEWPLP
SRTDQYELHIEVQPKPHHRAHYETEGSRGAVKAPTGGHPVVQLHGYRGKDPVGLQIFIGT
ADERILKPHAFYQVHRITGKTVTTNSYERIINGTKVLEIPLEPKNNMKAIIDCAGILKLR
NADIELRKGETDVGRKNTRVRLVFRVHIFQPGGQDVCLQVASHPIECSQRSAHELPMVEK
QDMDSCSVLGGQQMILTGQNFSSDSKVIFLEKSHDGQQLWEMEATVDKDKSQPSMLFVEV
PSYHDTSICQPVKVNFYVINGKRKRSQPQHFTFNPLTSPAIKTEPLDEYEAQNMSFGIPQ
ILGLSPQSYYHNPRGILHPDNGLMSGMASCQRFSPNLPNQDARFQQQSPAIVYSRGGKSL
SSSPGTWHSGGVIPDPHRSVLVHTGSPAQSVGPISSGQHPSIIQFSPTNHHLLRAGDAET
LPPPQPDNQQILFCDDYPPQAGSHSPGHPQAQAAVTHQQPCPTIIQQQQQPFGQKEPQKV
RVSPGTQPMEVTEEEQRRVTVKEENLDQAYLDDGELNEIIRKDLTGVQARGQT
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttctacgacgaaaaggatctggaggaagacctcagtcgagccaattgccct
gatgaggatttgcagtttgagtacttgtttgaatatgagccgccttgcagcgactttgca
ggagatcaagatgaccctggccttgcctctcacaaggtcctccgtcctgaatctgagcag
gttttccctttggatgagcagtacaggatcaagtcctgcaactccccttactccaacctc
aaccccgaagttctctcagggtacggaaaccaggaggccagaaactacctggacaacacc
cggcccccaggtctggccctgagcccccggatcgagatcaccccgtcccgagagcactac
agtcatggccgggactcgctgccgaaccagcacttgaacctcagccccagacccaccctc
actgtgcccggccatgagagcctcgcctaccgtgagccccagtgcctgagtcccgccagc
agcaactcctccaccagctggcactctgagagctactcgccctgggcgtccccctgtgtt
tcacccagtagcggcccaaatccagcagatctctgcccccgcatgcagaacatccacacc
tgctccccacgcacctccccgggtacctcccctcacaccagccttggagaagacggcggc
ctgggagcacgctcgccctctccccgaccgcgctccacctccccgcagggcaagcgcacc
tacgaaatgtaccggaatccggggctgatacctgggcagcggtcccgcagtccgtcccct
cacagcggccaggagaaccccaacacgggagctcatttcgcacacgttgttgagggcgtg
aatggatttggcagcagtcagccaggcatggtgcccaccaaaatagtcaagacctccaac
caactttacgctttaatcccagagaatcacggagacgggaactactgtgatcaggacatt
aaaaccaaaccttctgcagagcctttctatgttatcccatcaatctggcccaagccgctg
gttcccaatctctgcagcctcccattgaccacagccccaccactggagtggccccttcct
agtcgcacagaccagtatgagctccacattgaggtgcagcccaagccgcaccacagggct
cactatgagacagagggaagcaggggcgcagttaaagcccccacaggaggacatccagtg
gtgcagttgcacggctacagaggcaaagatccagttggcctccagatttttattggtacc
gcagatgagcgcatcctgaagcctcacgccttttatcaagttcaccggatcaccggcaag
acggtcaccaccaacagctacgagaggatcatcaacggcaccaaagtcctggagatccca
ttggagccaaagaacaacatgaaagccataatcgactgcgctggcatcctgaagctcagg
aacgctgacatcgagctgaggaaaggcgagacggatgtcggtcggaaaaacacccgggtc
cgacttgtgtttcgcgtgcacatatttcagcctggaggtcaggacgtctgtctgcaagtg
gcctcgcatcccatcgagtgttctcagcgttctgcacacgagcttcccatggtggagaag
caggatatggacagctgctccgtcctgggcggccagcagatgatcctgactgggcagaac
ttcagctccgactcaaaggtcatctttctggagaagagtcacgatggccagcaactctgg
gaaatggaagcaacggtggacaaagacaagagccaacctagcatgctgtttgtggaagtg
ccatcttaccatgatacatccatatgccaacctgtcaaagtgaacttctacgttattaac
ggcaaacggaagcgcagtcaacctcagcatttcaccttcaacccactgacatctcctgcc
ataaagacagaacctctagatgaatatgaagcacaaaatatgagctttggtattcctcag
atcttgggcttatcgcctcaatcctattaccacaaccctcgcggcatccttcacccagac
aatggcctaatgtcaggcatggcttcctgtcagcgcttcagccccaaccttccaaaccaa
gacgcgcgtttccagcagcaaagcccggctattgtctactctcgaggtgggaagagcctc
agtagcagcccaggcacgtggcactccggcggggtcatacctgacccccaccggtcagtg
ctggtccacacaggctcaccagctcagtctgtaggtcccatcagttcaggccagcaccca
tctatcatccagttctcccctaccaaccaccacctgctcagggctggagacgcggagact
ctccctcctcctcagcctgataaccagcagatccttttctgcgatgactaccctcctcag
gctggatcccactcacctggacacccccaagcccaggcagcggtgacccaccagcagcca
tgtcccaccatcatccagcagcagcagcagccgtttgggcagaaggagccccagaaggtc
cgggtgtcgcccgggacacagccgatggaggttaccgaagaagaacagaggagggtgacg
gtcaaggaggagaacttggaccaggcctacctagatgatggtgagttgaatgaaatcatc
agaaaggatctgacgggggttcaggccagaggtcagacatag
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