Xiphophorus couchianus (Monterrey platyfish): 114140918
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Entry
114140918 CDS
T05908
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114140918 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114140918 (nup50)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114140918 (nup50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
114140918
NCBI-ProteinID:
XP_027867045
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All DBs
Position
24:16310149..16318977
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AA seq
446 aa
AA seq
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MAKRIADKELTDRNWDLEEEGEEAGTFSVASEDVLKSRPIKKAKRRNTGGESEGGGAFKG
FKGFSMATSSTTPSSSLTAFSGFGGTGSFKGFGGLSNGTGSTASFGGFPSAAKAGVAFNG
PSSAQPGTDIVAQQTNGSAPGPSPAPCSRSREYSRQLTALNQSVRDWISKHVNDNPLCDL
NPIFRDYERHLASIEQQYGAGAEETQQGDASTPPPPAPSSSSSSSSVALFSFSKTSTEDP
GQKRSGSAPLPAGVSFNFGQKVDAPALGSLASKPSVPSFSFSSSSNQSSPFGAAGPSAAL
SFGGTKTSDAPAADDKDEESEEPPKPEVKEVKEDDAFYSKKCKLFYKKELEFKEKGVGTL
HLKRTAEGKTQMIIRADTNLGNILLNILVPPTLPCSRVGKNNVMVVCVPNPPVDDKNPSV
AVPLLIRVKTAEDADELHKTLEEKKR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggatcgctgataaggaactgacagacaggaactgggacctggaggaggag
ggagaggaggccgggacgttttctgttgcgagtgaggatgtgttgaagagccgccccata
aagaaagccaaacgcagaaacactggaggagagagcgaagggggaggagctttcaaaggg
tttaaaggcttctccatggcaacatcctcaaccacgccctccagcagcctcacagcgttc
tccggattcgggggtaccggcagctttaaaggctttggaggcctgagcaacggaaccggc
tccacagcttcgtttggaggattcccgtctgctgcaaaggccggtgtggcgttcaatggg
ccctcctcagcccagcccggcactgacatcgtggcccagcagaccaatggctccgccccc
ggccctagccccgccccctgcagccgcagcagggagtacagccggcagctgacggcgctc
aaccagtcggtgcgcgactggatcagcaagcatgtgaacgacaacccgctgtgcgacctc
aaccccatcttcagagactacgagcgccacctggccagcatcgagcagcagtacggcgcc
ggcgccgaggagacgcagcagggagacgcctccactccccctcctcctgctccctcttca
tcatcctcctcttcctcagtggctctgttctccttcagtaaaacctcgacagaagatccg
ggtcagaaacgctccggctcggcgccgctccctgctggcgtgtcctttaacttcgggcag
aaggtggacgcacccgccctggggtccttggcatccaaaccgtccgtccccagcttctcc
ttctcctcctcatccaatcagagctccccgttcggagcagctggaccctcggctgcattg
tcctttggcgggaccaaaacttcagatgctccagctgcagacgacaaagacgaagaatcg
gaggagcctcccaaaccagaggtcaaggaggtcaaagaggacgacgccttctactctaag
aagtgtaagttattctacaagaaggagttggagttcaaagagaaaggcgtgggaacgctg
cacctcaaacgcaccgcagaggggaagacccagatgatcatcagagccgacaccaacctg
ggaaacattctgctgaacatccttgtgccgcccaccctgccgtgctcgcgggtcgggaag
aacaacgtcatggtggtctgtgtgccgaacccgcccgtcgacgacaagaacccgagcgtg
gccgtccccctgctgatccgagtgaagaccgcagaggacgccgacgagctccacaagacg
ctggaggagaagaaacgctga
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