Xiphophorus couchianus (Monterrey platyfish): 114141004
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Entry
114141004 CDS
T05908
Name
(RefSeq) prickle planar cell polarity protein 3-like isoform X1
KO
K04511
prickle
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04310
Wnt signaling pathway
xco04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114141004
09133 Signaling molecules and interaction
04519 Cadherin signaling
114141004
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Motif
Pfam:
PET
LIM
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
114141004
NCBI-ProteinID:
XP_027867197
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Position
24:complement(12643255..12677004)
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AA seq
787 aa
AA seq
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MFLRGSKKRRSNRSQEEEDPDRGQPCMRCGDQCPGFRVHGWRKICVHCKCVREEHALQSV
PGQLEKMMTKLVSDFQRHSISDDDSGCASEEYAWVPPGLKPEQVYQYFSCLPEDRVPYVN
SPGERYRIKQLLHQLPAHDSEPQYCNSLNDEEKKELRTFSQQRKRDNLGRGVVRPFPVTM
TGAICQQCGRQICGGDIAVFASRAGHGSCWHPQCFQCSSCSELLVDLIYFFQDGQIYCGR
HHAERLKPRCQACDEIILADECTEAEGRYWHMKHFCCFECEAALGGQRYIMRESRPYCCS
CYESLYAEYCDTCGESIGIDQGQMTYEGQHWHAVESCFCCARCRLPLLGRPFLPRGGLIF
CSRSCSLGDDPNNSDSCDSALQSRSPHHGRQWGTLERMHCSSPLQPPEGVKHSPAQDCIH
TAVENRGLHCSAPVQNEAPSHTGHPHPRVSYSPLPHIHLGNGWPSDVPHYSLLPGDSSVK
PPATGIPLQEELNGNTGLTGSNSRGTSTNKDCRNWVEKTNQAMQDTPPPSSDSSPVLPPP
LPIKSRDLMPRDASPLSPSHRKDQPPESPPPLTRSGQARVSFREPISSSYSVEEDDDEEE
EEEERLQVTVETKPTEDDDGEVAGFGSRLHLQRGIPPQMDLLDGSSYHRHHLKRGWGRSR
TSSDPVLRPGLERRQSDRPRLDTLDLKAESRRDARSSCSIPSLSLQQGPYKHEDCCSTCS
SSSESEEEGFFLGQRIPLPPQLRQPDDGPAGRAEEILEMQRDRGLRGSIRRRRAQSAKEK
DKNCAVS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgcgcggctcgaagaagcgacggtccaaccgctcgcaggaagaagaggaccca
gacagaggccagccctgcatgcgctgcggagatcagtgtcccggcttccgcgtccacggc
tggaggaagatctgcgtgcactgcaagtgtgtgcgggaggagcatgcgttgcagtcggtg
ccagggcagctggaaaagatgatgactaagctggtgtcggacttccagaggcactccatc
tccgacgacgactcgggatgcgcctccgaggagtacgcttgggtcccacctgggctcaag
cctgaacaggtgtaccagtatttcagctgcttgccagaagacagggtgccttatgtgaac
agtccgggggagagatacagaatcaaacagctgctgcaccagcttccagctcacgacagc
gagcctcagtactgcaactctttgaatgatgaggagaagaaagagcttcgtacgttcagc
cagcagagaaaacgagataacttgggcagaggcgtcgtcagacctttccctgtcaccatg
actggggccatctgccagcagtgcggcagacagatctgtggtggagacatagctgtgttc
gccagccgggcgggtcacggcagctgctggcacccccagtgtttccagtgctcgtcctgc
agcgagctgctggtcgacctgatctacttcttccaggacgggcagatctactgcggccgg
caccacgctgagaggctgaagccccgctgccaggcctgtgatgagatcattctagcagac
gagtgtacggaggcagaaggaaggtactggcacatgaagcacttctgctgctttgagtgt
gaggcggcgctgggcggtcagcgctacatcatgagggagagccgaccatactgctgctcc
tgctacgaatccctgtatgcagaatactgcgacacatgcggcgagtcaataggtattgat
caaggccagatgacgtacgagggtcagcactggcacgcggtggagtcgtgtttctgctgc
gcccgctgtcggctgcctctgctcggccgacccttcctcccacgcgggggtctcatcttc
tgctccaggtcctgctccctgggcgacgaccccaacaactcggactcctgcgactcggcg
ctgcagagcaggtctccccatcacggcaggcagtgggggacgctggagaggatgcactgc
agttcccctctgcagccaccagagggtgtcaaacactctcctgcacaggactgcattcac
accgcagtggagaatagagggcttcactgcagcgctccagttcagaatgaggctccgtca
cacaccggccatcctcatccaagagtctcctactcgcctctgcctcacattcacctggga
aacggctggcccagcgacgttccacattacagtctgctgccaggggacagtagcgtaaaa
ccgccagccactggtatcccattgcaggaggagctgaatggaaatactggactaactgga
agtaattcaagaggaacctccaccaacaaagactgcaggaactgggtggaaaagacaaat
caggcaatgcaagacacgccgcctccatcatcagacagctcccccgtcctcccacctcct
ctgcccattaagtcccgggacctgatgccgcgggacgcgtcccctctgtccccgtcccat
cggaaggaccagccccctgagtcgcctcctccgctgacacgcagcggccaagccagagtc
agcttcagggagccgatcagcagcagctactctgtagaggaagacgacgatgaggaggag
gaggaagaagagaggcttcaagtcaccgtggaaaccaagccaactgaggatgacgatggt
gaggtggcgggttttggaagcaggctgcatcttcagagaggcatcccaccacagatggat
ctactggacggctcttcatatcatcgtcatcacctgaagcgcggttggggccgctcgcgt
acgtcctccgaccccgtcctccgtccgggtttggagcggcgccagtccgacagaccccgg
ctcgacactctggacttgaaggccgagagccggagagacgcacgcagctcctgcagcatc
ccctccctgagcctccagcagggaccctacaaacacgaggactgctgctccacctgctcc
tcctcctccgagtccgaggaggaaggcttctttctggggcagcggatccctctgccgccg
cagcttcggcagcccgacgacggcccggccgggcgggccgaggagattctggagatgcag
agagaccgcggcctaagaggcagcatccggcggagacgagctcagagcgcaaaggagaaa
gataaaaactgcgccgtgtcctga
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