Xiphophorus couchianus (Monterrey platyfish): 114141053
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Entry
114141053 CDS
T05908
Symbol
rnf41
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114141053 (rnf41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114141053 (rnf41)
04121 Ubiquitin system [BR:
xco04121
]
114141053 (rnf41)
03029 Mitochondrial biogenesis [BR:
xco03029
]
114141053 (rnf41)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114141053 (rnf41)
Membrane trafficking [BR:
xco04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114141053 (rnf41)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
114141053 (rnf41)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114141053 (rnf41)
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
114141053 (rnf41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_interact
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_6
zf-rbx1
zf-C3HC4_4
zf-C3HC4_3
zf-RING_UBOX
Sina_ZnF
zf-Nse
zf-RING_5
U-box
zf-ANAPC11
zf-TRAF
Trimer_CC
SlyX
zf-TRAF_2
zf-RING_10
Rootletin
DUF641
Sos7
DFF-C
Laminin_II
LXG
DUF16
DUF4795
zf-RING_16
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
114141053
NCBI-ProteinID:
XP_027867260
UniProt:
A0A3B5M6P8
LinkDB
All DBs
Position
24:11666029..11675244
Genome browser
AA seq
318 aa
AA seq
DB search
MGYDVTRFQGEVDEDLLCPICSGVLEEPVQAPHCEHAFCNACITQWFAQQQICPVDRTVV
TLAHLRPVPRIMRNMLSKLQINCDNASFGCTATLRLDQLQSHLKDCEHNPKRPVNCEEGC
GLEMPKDEVPNHNCIKHLRSVVQQQQTKISELEKTVAEHKHQLGEQKRDIQLLKAYMRAI
RSANPNLQNLEESIEYNEILEWVNSMQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPL
SIVNDLIENAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDM
ILEPGLVMIFAHGVEEIL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggggtacgacgttacgaggttccagggtgaggtggatgaagacctgttgtgtcccata
tgcagtggagtactagaggaaccagtgcaggctccacactgtgaacatgccttctgcaac
gcctgcataacccagtggtttgcccagcaacagatttgtcccgtggaccgcacagtagtg
acgctcgcccacctgcggcccgtgccccgcatcatgcgcaacatgctgtccaaactccag
atcaactgtgacaacgccagcttcggctgcacggcgacgctgcggctggaccagctgcag
tcgcacctcaaggactgcgagcacaacccgaaaaggccggtcaactgcgaggagggatgt
gggcttgaaatgcccaaggatgaggtgcccaaccataactgcatcaaacatttacggagc
gtcgtgcagcagcagcaaaccaagatttctgagctggagaaaactgtggctgagcataaa
caccagctgggggaacaaaaacgagacattcagctgctaaaagcgtacatgagagcaatc
cgcagcgcaaacccaaacctccaaaacctcgaagagagcatagagtacaacgagatcctg
gagtgggtgaactccatgcagccggccagagtcacccgctggggcggcatgatctccacg
ccggacgccgttctccaggccgtcatcaagcgctcgctcatcgacagcggctgcccgctg
tccatcgtcaacgacctgatcgagaacgcccacgagcggaactggccgcagggtctggcc
acgctggagacgcggcagatgaacaggcgctactacgagaactacgtggccaagcgcatt
cccggcaagcaggcggtggtggtgatggcctgcgagaaccagcacatgggcgaggatatg
atcctggagcccggcctggtcatgatctttgcgcacggagtggaggagatcttataa
DBGET
integrated database retrieval system
