Xiphophorus couchianus (Monterrey platyfish): 114141394
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Entry
114141394 CDS
T05908
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xco03016
]
114141394 (trmt13)
Enzymes [BR:
xco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
114141394 (trmt13)
Transfer RNA biogenesis [BR:
xco03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
114141394 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
114141394
NCBI-ProteinID:
XP_027867739
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MATPLPSRCSFFVQKKNRFCKMVPGKGRSFCGEHATMEEGVGGSRRITCPLDPKHTVAQQ
NLEKHLKKCNSREKPRPVYYVENINAGRVDRDQEFPEVSLAERSRADLESLVEKLKAAAE
GLQQDMEDRTLSHPILQEELSDPKNGGSAHKHLKQQASLLGHLQELGLLSRGRCFVEFGA
GRGKLSHWIHRALQNPEGQGVAMETSQDLQLLLVERCSTRFKVDGKHQGSADPFERLQVD
IQHLDLSKVPVLREKALPLVGVGKHLCGAATDLALRCLLDTAGAQSDTQPLPKSVRGPES
GTGTGPVLGLTVALCCHHRCEWRHYVGQQFFLQRGLGPAEFSAFCRMSSWATCGPPANHN
GTTSQSGAAKQSGAAEDHEEAERLAVLSRFWSAAEREHLGRLCKLLIDSGRRDFLQTRGF
SSRLIGYAHAEVTLENVLLTALPSS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacctctgcctagcagatgcagcttcttcgtccagaagaaaaaccgcttctgt
aagatggtccccggaaaggggcggagcttctgcggagagcacgcgaccatggaggagggg
gtcggtggcagcaggaggatcacgtgtccactggaccccaagcacaccgtggcccaacag
aacctggagaagcacctgaagaaatgcaactctagagagaaaccccgacctgtctactat
gtggagaacatcaatgcaggacgagttgatagagatcaggagtttccagaggtgtctctg
gctgagcgcagcagagcagatctggagtctctggtggagaaactgaaggcagctgctgaa
ggtcttcagcaggacatggaggacaggacgctgtcccatcccatcctccaggaagaactg
tctgacccaaagaacggaggctccgcccacaaacacctgaagcaacaggcctccctccta
ggtcacctgcaggagctgggtctgctcagcagggggcgctgctttgtggagttcggcgcc
ggccggggcaagctgtcccactggatccaccgggccctgcagaaccctgagggtcagggg
gtcgccatggaaaccagccaggacctccagctgctgctggtggagcgctgcagcacccgc
tttaaggtggatgggaagcaccagggttctgccgacccgtttgagcggctacaggtggac
attcagcacctggacctaagtaaagttccggtgctgagggagaaagcgctgccgttggtg
ggagtcgggaagcatctctgcggagcggcgacagatctggccctgcgctgcctactggac
acggccggagcccaatcagacacccagccgcttcccaagagcgtcagagggccagaatcc
ggcactggtaccggtccggttctgggcctgaccgtggcattatgctgccaccaccgctgt
gaatggcgtcactacgtgggtcagcagttcttcctccagagaggactcggacccgccgag
ttctccgctttctgccgcatgtccagctgggccacctgtggcccgccggccaatcacaac
ggaacaaccagtcagagcggagcggccaaacagagcggagcggctgaggatcatgaagaa
gcggagcggctggcggtgctaagcaggttctggtcggcggcggagcgggagcatctgggt
cggctctgtaagctgctgatcgacagcggtaggcgggacttcctgcagaccagaggcttc
agcagccgtctgattggctacgcacacgcagaggtgaccttggagaatgtcctgctgacc
gccctgccctcgtcctga
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