Xiphophorus couchianus (Monterrey platyfish): 114141452
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Entry
114141452 CDS
T05908
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114141452
03041 Spliceosome [BR:
xco03041
]
114141452
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
114141452
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114141452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
114141452
NCBI-ProteinID:
XP_027867791
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MIDSFPEKRCREELFISVLHDSAAAQRKNQLLLCSVHHDITVGTKRGSDELFSSVSNGPY
IMSTTANGNDSKKFKGDIRGPSLPSRVIHIRKLPSDITEAEVISLGLPFGDVTNLLMLKA
KNQAFLEMNSEEAAQNMVGYYSTMMPVIRHQPVYLQFSNHKELKTDNSPNQERAQAALRA
LSSSHVDTLMAAPSTVLRVVVENLLYPVTLDALCQIFSKFGTVLRIIIFTKNNQFQALLQ
FSDGSSAQAAKLTLDGQNIYNGCCTLRISFSKLTSLNVKYNNEKSRDFTRPDLPSGDSQP
ALEHPAMAAAFAPGIISAAPYAGATHGFPPAFAFQPAVSSAYPGLTLPALPGALASLGLP
ATARLGFPSIPAGHSVLLVSNLNPERVTPHCLFILFGVYGDVMRVKILFNKKENALVQMC
DSTQAQLAMSHLNGQRLHGKPLRITLSKHTSVQLPREGHEDQGLTKDYSNSPLHRFKKPG
SKNYSNIFPPSATLHLSNIPPSVVEDDLKMLFSSSGAIVKAFKFFQKDHKMALIQMGSVE
EAIDCLITFHNHDLGETHHLRVSFSKSSI
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgatagactcatttcctgaaaagcgatgcagagaggaattatttattagtgtgttacat
gactcggctgcagcacagagaaagaaccagctactgctatgcagtgtccaccacgatata
acagttggtactaagagaggatctgacgagcttttctccagcgtctccaacggcccgtat
atcatgagcaccacagccaatggcaacgacagcaagaagttcaaaggtgacataagaggc
cccagcctgccgtcgcgggtcatccacatccgcaagcttcccagcgacatcacagaggcc
gaggtcatcagcctgggcctgccgttcggcgacgtcaccaacctgctgatgctgaaagcc
aagaaccaggccttcttggagatgaactcggaggaagcggctcagaacatggtgggttat
tactccactatgatgcccgtcatccgacaccaacccgtctacctgcagttctccaaccac
aaggagttaaaaacggacaactcccccaaccaggagagggcccaggcggctctgagggcc
ctcagctcctcccatgtggacacgctgatggcagctcccagcacggtgctgagggtggtg
gtggagaacctgctctaccccgtcaccctggacgccctctgccagatattctcaaagttc
ggcactgtgctgcggatcatcatcttcaccaagaacaaccagttccaggcgctgctgcag
ttttcagatggctcatctgcccaggcagccaaactgactctggatggacagaacatctac
aacggctgctgcaccctgaggatcagcttctccaaactcaccagcctcaacgtcaaatac
aacaacgagaagagccgggacttcacccggccggacctgccgtccggagacagccagccc
gccctggagcacccggccatggccgccgccttcgctccaggaatcatttctgcggcgccg
tacgccggagcgacgcacggcttcccgccggcgtttgcgttccagccagcagtgtcctcc
gcctacccgggcctgacgttgccggctctccccggagcgctggcctccctgggcctcccc
gccaccgccaggctgggtttcccctccatccccgccggacactcggttctgctggtcagc
aacctgaaccctgagagagttacgccccactgcctctttattctcttcggtgtttatgga
gacgtgatgagagtgaagatcctgttcaacaagaaggaaaacgctctggtccagatgtgt
gacagtacccaggctcagctagccatgagccacctgaatggccagcggctgcatgggaaa
cctctccggatcacgctgtccaaacacaccagcgtccagcttccccgtgaaggacatgag
gaccagggcctgaccaaagactacagcaactccccgctgcaccgcttcaagaagcccggc
tccaaaaactattccaacatctttcctccctccgccaccttgcacctctccaacatcccc
ccttctgtggttgaagacgacctgaagatgctgttttccagctctggagccatcgtcaag
gccttcaagttcttccagaaggaccataagatggctctgatccagatgggttcagtggag
gaagccatcgactgcctcatcacgttccataaccacgacctgggcgagacacaccacctg
cgcgtctccttctccaagtcatctatctga
DBGET
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