Xiphophorus couchianus (Monterrey platyfish): 114141520
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Entry
114141520 CDS
T05908
Symbol
clstn3
Name
(RefSeq) calsyntenin-3 isoform X1
KO
K22661
calsyntenin 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114141520 (clstn3)
Cell adhesion molecules [BR:
xco04515
]
Cadherins
Cadherin related
114141520 (clstn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
DUF5570
Motif
Other DBs
NCBI-GeneID:
114141520
NCBI-ProteinID:
XP_027867866
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All DBs
Position
3:complement(12481154..12519928)
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AA seq
957 aa
AA seq
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MDRMNFLSFLLLCLTSVANCNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPSGSGSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGVNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPNVPFAIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWNGWTKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSNHVAV
VPDSVVSALSGDHFTLQLWMRRGGANIQPSATQSRGNRKEEETIVCSTVKNDDSYSHYSL
SVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAL
IHDNGAIPNPAPRQRMLIGACWEPEEKQKEILNNTIPEGKDSVKFVGGYHGLLSGVTVRP
GSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLTTSLRCFNEESCLSLKQLEGYLVVLQPDAPQISLSGVGPHLAR
PAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEEL
NPEREELLVDMDVVRERGLDIINTTAYIAITGAESISVYEDVLRSVRYRLARGSGRFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLESLYHPSHLLASQQQFLHPSHHSGELSGHTLPN
PHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGSRGGAKEGSNQWDDSALT
IIVNPMESYESRMGISADTEGDGEEEEEEAAESPDDASDDQRIIIKKEGRDGNARRY
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgaattttctctccttcctcctcctttgcttgacttcggttgccaattgc
aacaaagccaataagcacaagccatggatcgagacagagtaccaggggattgtcatggag
aacgacaacaccgtgctgctcaatccccctctcttcgccctggacaaagacgctccgctt
cactacgctggtgaaatctgtggcttccgggttcacaatggcccctcgggctccggttcc
gttcagtttgaagctgtggttctggaccgctccaccggcgagggtctggtccggtccaaa
gagccgctggactgtgagagccagcgggagcacagcttcaccatccaggcctacgactgc
ggagagggacccgatggcgtcaacagcaagaaatcccacaaggccacggttcatgttcgt
gtgaacgatgtcaacgagttttccccagtgtttgtggagcgtcgctacgaggcttcggtc
ccggagggccgtctgtttgacaggatcgtgcgggtcgaggctctggatgccgactgctcc
ccgcagtacagccagatctgcttctatgacatcatcactcccaacgtgcccttcgccatc
gacaacgacggtaacattaagaacacggagcctttggattcgaagcggcagcgtgttcac
accttctgggtgaccgccttcgactgtgggaagaatcgcgctcaggctgatgcccaggtt
gtcgtcacagtcaagccgtcctgcaaacccggctggaacggatggacgaaacgggtggag
tacacacctgggtcaggcagcatccccctgttccccagcctgcatctggagacctgcgaa
gaaacagtgtggaacatccaggccaccgtagagctacaaaccggccatattgggaagggc
tgtgacagagacagctactctgaccgttctgttcggcgactgtgtggtgccgtcaggggc
gaagtcgatcttctcccacctccatctccagcagccaactggacctcagctctccccact
cttccttcttccgattcttctctggtcttctccttcaatgggtcgaatcatgtggcggtg
gttcccgactcggttgtgtccgctctgtcgggcgaccacttcaccctgcagctgtggatg
cgtcggggcggcgccaacatccagccttcagccactcagtctagaggaaatcgcaaagag
gaggaaactattgtgtgcagcaccgtaaagaacgatgactcctactcccattattcgctc
tccgtccacggctgccgcctctccctcttctactggcccgatgtctcggccgcacggccc
gtcaagttcctctggaagctggagcaggtgtgtgacagcgaatggcatcatctgtccctc
agtgtccagttcccatcagtgacgctgtatgtggacggcgtcacctttgaccctgccctc
atccatgacaacggcgccatcccgaaccctgcgccccgtcagaggatgctcatcggtgcc
tgctgggaacccgaagagaagcagaaggagatactaaacaacacgatcccagaggggaaa
gactcagtgaagtttgtgggtggttaccacggcctgctgtcaggggtgacggtgcgtcct
ggcagcgtggagccgcacagcgtggtggagtgcttgtacgcctgcagggaggggctggac
ttcggagacctggagactctgggttctgggatgaaggtccatgtgaaccccagtcaatcg
gtcctggtgctggagggagacgacatcgagagcttcaaccgagccgttcagcaggtcacc
tacagaaactcgcttcgcttcgccacccctggagtccgacctctcaagctcaccacttcc
ctcaggtgtttcaatgaggaaagctgcctgtcactgaaacagctggagggatacctggtg
gtactccagcctgatgcccctcagatctctctgtccggggttggcccacatctggcccgt
ccggcgcctgagtttgaaggaccccgcggcgtccccctcttcccggagctgcggatcgtc
tgctcactgtcacatgctgtcaacacagctgcacagggcatggagggcggagctctgatg
tcggatgctgtggctcacactttggacggatgtgaggtgcagccgctgggagaggagctg
aatccagagcgggaggagcttctggtagacatggacgttgtgcgagagcgaggactggat
atcatcaataccaccgcttacatcgcaattacaggtgctgaatccatctctgtgtacgag
gacgtcctccgctcagtccggtaccgcctggccagaggctctggccgctttgagaggcgg
ttccgcctgtcgtgctccgagatgaatggcagatacacaagcaacgagttgactctggag
gtgaacttcctccactctttggaaagcctataccacccttcccacctgctggcctcacag
cagcagttcctccatccatctcatcattccggagagctgagtggacacaccttgccgaac
ccacatcgcaactcagtggttccaggagcagccaccgtcatcattatggtctgtgtgggc
ttcctggttgtcatggtgatcctcggtgtcttccgaattcgctcgatccatcgtcgaggt
gaaggctccaggggcggggctaaagagggcagcaaccaatgggacgactcggcgctcacc
atcattgtcaacccaatggagtcctacgaatcccgtatgggcatttctgccgacacggag
ggcgatggagaggaggaggaagaagaggcagcggagtcacctgacgacgcaagcgacgac
cagcggatcatcatcaagaaggagggcagagacggaaacgcccgccgctactga
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