KEGG   Xiphophorus couchianus (Monterrey platyfish): 114141539
Entry
114141539         CDS       T05908                                 
Symbol
taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    114141539 (taf12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xco03021]
    114141539 (taf12)
   03036 Chromosome and associated proteins [BR:xco03036]
    114141539 (taf12)
Transcription machinery [BR:xco03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     114141539 (taf12)
   Coactivators
    SAGA/TFTC/STAGA complex
     114141539 (taf12)
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     114141539 (taf12)
    STAGA complex
     114141539 (taf12)
    TFTC complex
     114141539 (taf12)
    SAGA complex
     114141539 (taf12)
    SLIK complex
     114141539 (taf12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C TAF10 Tic110
Other DBs
NCBI-GeneID: 114141539
NCBI-ProteinID: XP_027867913
LinkDB
Position
3:7811807..7814928
AA seq 131 aa
MANSTPIIVKGLTSGPAGRSSPEGSQVLSKKKLQDLVREIDPNEQLDEDVEEMLLQIADD
FIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGYGSDEIRPFKKACTTEAHKQ
RMALIRKTTKK
NT seq 396 nt   +upstreamnt  +downstreamnt
atggctaacagcaccccaataatagtgaagggtctgacctcaggtcctgcaggcaggagt
agtccggagggatctcaggtcctcagtaagaagaagctgcaagacctagtgagagaaatt
gatccaaatgaacaactggatgaagatgttgaggagatgctgcttcaaattgcagatgat
ttcatagaaagtgtagtgacagcagcgtgtcagctggcacgtcatcgcaaatccaatacg
ctggaggttaaagatgttcagttacacctagagcgtcagtggaacatgtggattccaggt
tacggatcagatgaaatcagaccattcaaaaaagcttgtactacagaggctcacaaacag
agaatggcactgattcgcaagacaaccaaaaagtag

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