Xiphophorus couchianus (Monterrey platyfish): 114141563
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Entry
114141563 CDS
T05908
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114141563 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114141563 (cnot3)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114141563 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114141563 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
114141563
NCBI-ProteinID:
XP_027867960
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Position
3:complement(13980302..13995747)
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AA seq
896 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIDELKRLIERHRYHI
RMLETILRMLDNDSVPVDAIQKIKDDVEYYIDSCQDPDFEENEFLYDDLDLEDIPPALVA
TSPSGNVEDDMYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSQVSQSPVK
NGAPSLQSSFSSSATSGSSSSSSLSMASVVGGIPAIPTSSLIGSFSSAVQQHQHQSAQQQ
QQSQPSNPSQQQPPQTKPSAPSNNNNPSPPSNPLLPASTAPSLSTPSTPSLTAPNSQSSP
GPTPASSLGLGLGLDLRKGGMSGTSSANQMPSLGLAGHSTPLNTMAGLIQGSTSALYAHA
AASGSLGLSSTTQSSILPESSTSISNSSSSGVTTNGAGSGLSLLGSSPAHNSLTGSILGL
VPGQSVAPATSQVPPSPASSAPGSVSMMVGNGGNAGVVGVNAAPARPPSGLKQNGSPSYS
AVVAESSTESALSTLSQSQSSQTSSLSSSTSQPMDNGPSLISSITLPPSSPSPSFSDSTP
GGGSLLNGPHSYPQASEGLKAPEPLSSLKAMAERAALGSGLDGEISNMHVNDIFSGSSAA
PGTTAAPQQSVSEVSIPPSLGVCPLGPTPLSKDQLYQQAMQEAAWTHMPHPSDSERIRQY
LMRNPCPTLPYHHQVPPHHSDTIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKKQSWR
FHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaactacaaggtgaaattgacagatgtttgaaaaaagtagcggaa
ggtgttgaacagtttgaggacatctggcaaaaactccacaatgcagctaatgcgaaccag
aaggaaaaatatgaagctgacctcaagaaagagattaaaaaattacagcgattgagagat
caaataaaaacatgggtggcctcgaacgaaatcaaagacaaacggcagctagtagagaac
cgaaaactaatagagacgcaaatggagcggttcaaagtggtggaacgtgaaacaaaaaca
aaagcctactctaaagaaggcttaggacttgctcagaaggtggatccagctcagagggaa
aaggaggaaacgggacagtggttaacaaatacaatagacacactaaatatgcaggtggat
cagtttgagagcgaagtggagtcactttcagtccagacgcgaaaaaagaagggtgacaaa
gagaagcaagatcgcattgatgaactaaagcggttgattgagaggcatagataccacatt
cgcatgttggaaactattttacggatgctggacaatgactctgtaccggtggatgctatc
cagaagatcaaggatgatgttgagtactacattgattcctgtcaagacccggactttgag
gagaacgagtttctgtatgacgacttagacctggaagacatccctccagcattagtcgcc
acgtctccatcaggcaacgtggaagatgacatgtatctccactctagcagcactcccacc
tcaacaacatcttcttcgcccatccctccatctccggccacttgcactgctgagaactca
gaggacgataagaaaaggggacggtcgacagacagtcaagttagtcagtcgcctgtgaag
aacggtgccccatctttgcaatcttccttctcttcttccgccacctccgggtcctcttct
tcctcctccctctccatggcgagcgtcgttggaggcattcccgccattcccaccagcagt
ctcataggaagtttcagcagcgcggtacagcaacatcagcatcaatctgcacaacagcag
caacaatctcagccgtcgaatccgtcgcagcagcagccgcctcaaacaaaaccgtcagct
ccctcaaacaacaacaaccccagcccacctagcaacccacttctcccagcatccacagcc
ccgtcactctccacgcccagcacacccagtttaacagctcccaactcccagtccagccct
gggccgaccccagcgtccagcttaggactggggctgggcttggatttaagaaaaggcggc
atgagcgggaccagcagtgccaaccagatgccgagtttaggcctggctggccacagcact
cctttaaacacaatggccggtctgattcaaggctccacgtcggccctctacgcgcacgcg
gcggcgtctgggagcctgggtctgagcagtaccactcagtccagcattttgccggagagt
agcacttccatctccaattcgagttccagcggggtcaccaccaacggagcggggtcaggg
ctcagcttgctgggctccagcccagcccacaactctctcactggtagcatcctgggtctg
gtccctgggcagagcgtggcccctgccacatcacaggtgcccccaagtcctgccagctcc
gcccccgggtccgttagcatgatggtaggaaatggagggaacgccggtgtggtcggagtg
aacgccgctcccgccagaccgccgagcggactgaagcagaacggaagcccaagttacagc
gctgtagtggcagagagctccacagaatcagctctaagcacactgagccagtcacagagc
agccaaacctcgtcactcagttcctcaaccagccagccgatggacaacggccccagctta
atcagctccatcacactgccccccagctctccctctccctccttctcagacagcacaccg
ggcggagggagcctcctcaacgggccccactcgtatccgcaggcctctgagggcctcaag
gctccggagcccctcagctctctgaaggcgatggctgagagagcagcgctgggatcagga
ttagacggagagatttccaacatgcatgtaaacgatatcttctctggttcgtcggcagca
cccggcacaactgccgctcctcagcagtccgtgtcggaggtcagcatccccccctcgctc
ggggtctgtcctctgggcccgacccctctctccaaagaccagctgtaccagcaggccatg
caggaggcggcgtggacacacatgccacacccttctgactccgagaggatcaggcaatac
ctgatgaggaatccctgccctactttgccataccaccatcaagtcccaccgcaccactct
gacaccatcgagttctaccagaggctgtccacagaaactctcttcttcatcttctactat
ctggagggcaccaaggctcagtatctatctgccaaggctctgaagaaacaatcatggagg
tttcacaccaagtacatgatgtggtttcagaggcatgaagagcccaagacgatcactgat
gagtttgaacagggcacttacatttacttcgactatgagaaatggggccagaggaaaaaa
gaggggttcacctttgagtacaggtacctcgaggacagagacttgcagtga
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