Xiphophorus couchianus (Monterrey platyfish): 114141580
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Entry
114141580 CDS
T05908
Name
(RefSeq) myomesin-3-like
KO
K24495
myomesin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114141580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114141580
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
114141580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
ig
Ig_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
C2-set_2
Tissue_fac
fn3_2
Ig_J
LapA
Motif
Other DBs
NCBI-GeneID:
114141580
NCBI-ProteinID:
XP_027867996
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All DBs
Position
3:complement(9463747..9522695)
Genome browser
AA seq
1427 aa
AA seq
DB search
METRMVMQREQEEQLSQMSHGMQLSTQIKKRTFTSSNEDASYSNVQPIIPADLMSVKEIL
NMSNLPRHRTWEVLQETMAADEEYHREKWTRFGNEAERTEIDVIRNQHLLRNRVDKMALR
RQAENKKSAHLNYLERLSQKAPDFTIPLRAHTVWEGMTVILSCSVQGCPSPKIQWYKDGE
PLIISSQPWNYSLKQNCGLSLLEIRRCSPADVGEYKVVAKSALGEATTFGTLVVNSYHGA
MTGSESTQTTGLQQQKEAQFDISFPPTWVKEGSGLSLQCTFTSDLLPFQQDVLWFRDGIQ
LQQSSNVDIKTFDNKSIITMMAAYKENEGVYCARLRTRDGIEEHMAFVYLKDGSAAVPGG
PASPLAVEVSDVNKDYVFVTWQPPSADGGSPVEGYYVERCDLSQGEWVRCNVDIQKICHF
PVFGLRERALYQFRVCAVNKAGVGRPSKATEPVLTADPLEYTRTMVVQVDRGRTITITKD
ELEGQVKAPFPPTDVRACELSDTYVVLSWTEPEARGREPLTFYVERSLAGKSSWELASLD
KVVNSPRYPVFDLVKDKQYCFRVRSINKYGVSDPSDPSPPISLGKPQAVPPPPHSVMAIR
DTDTSVLLQWQEPKDKDDIVGYYLYYSEAEKQEWKTANNKPLTTTRFIVHGLKTWKEYVF
RVKSVSRVGNSKYSDESHPILVKSAINVPSSPSAIALLLCTESEIVLGWRAPSSNGGSSV
CGYYLDQKEKGMEIWREVNIKPAKEKQLKVSDLKTGHFYQFRVFAANAAGVGKPSDASEA
FLCEKWTMPEPGCPYDLEFREVRDDSLVLRWASPLYEGQSPVSGYMLEMSQGNQSDNWTI
LTAKPVSETHYKVTGLQTGHTYCFRVSAVNNAGVGRASLPSESVTVQTQPGTKEIKIGVD
DDGFIFLGYEAVEMNDDSEFIWSKNYTEPIDSQRTKAETTKNRSVVTFTDPSEEDLGLYT
VEMSDCPQLSSSYDFTAEDLERLKDLSWQVRNPLIALKSTWQVEVSEKGNVRLWLQTESL
SDSAELRLVFNDREISTSPRRKINFDKAKGLVEILFDQLSQEDEGSYTAQLRDGHAKNQC
TLVFVDQKFREILALADWNRRDIQRKTGPYFQEFLTWSVNTDCELIIQCKVTNTNKDTSF
KWFKDGLEIKDLSYDQTTGIISLSISQVTKKEAGSYRAVVSDSRGEDVSTLELLDNEYDK
LLQQLSEQCALSAGPLRIESTAEGFRIYSSLRYYIGFLKTSWYFKGRKIDQETRTKPGSS
MQKVWIEMLNPTENDKGEYILEMFDGKETHKRLYELSTEAFAEALLEHQRLKQLAIAEKN
RAKVVKGLPDVVAIMEGKSLCLTCFIDGDPAPEIFWLRNDREILDQTQFTITKESKRTSI
TVNKVTTEDSGKYSIFVRNQYGSETVDVTLSVYKKGDKPPANAVEMG
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaggatggtgatgcagcgagagcaagaagagcagttgtcccagatgtctcat
ggcatgcagctttccacccagataaagaagcggaccttcacttccagtaatgaggatgcc
tcctactctaatgtccaacccatcattcctgctgatctgatgtctgttaaagagatcctg
aacatgagcaatttaccccgccacaggacttgggaagttctgcaagaaacgatggctgca
gatgaagagtaccacagagagaagtggactcgctttggcaatgaagcggagaggactgag
atagatgtgataaggaaccagcatctgttgcgcaatcgtgttgacaaaatggcgctccgg
agacaggcagaaaataagaagtctgcccatctgaactacttggagagactaagtcagaaa
gctccagatttcactatccctctgagagctcacaccgtctgggagggaatgactgtgata
ctgtcctgcagtgtccagggttgtccatccccaaagattcagtggtacaaagatggtgaa
ccactaataatatcttcccaaccatggaattacagcctcaaacaaaattgtggcctcagt
ttactggaaatcagaaggtgctctccggcagatgttggagagtataaagtggttgccaag
agtgccctgggtgaagcaacgacatttggaaccttagtagtaaactcatatcatggagcc
atgactggttcagagtccacgcagaccacaggcttgcagcaacaaaaagaagcccagttt
gacatttcctttccacccacctgggtaaaggagggcagtggcctctccctgcagtgtacc
ttcacatcagacctgcttcctttccagcaggacgtcctctggttcagagatggcatacag
ttgcagcagtccagtaatgtggacattaagacatttgacaataaatccatcatcactatg
atggctgcatacaaggagaatgaaggtgtttattgtgccagactgaggaccagggatgga
attgaggaacacatggcttttgtctaccttaaagatgggtcggctgcagtgccgggaggc
cctgcatctcctttggcagtggaggtgtccgatgtcaacaaggactacgtctttgtgacc
tggcagccgcccagtgctgatggaggatcacctgtggagggctattatgtggagaggtgt
gacctcagtcagggagagtgggtgcgctgcaatgtggacattcagaaaatatgccacttt
ccagtgtttggcctgagggagagggctctataccagttcagagtttgtgctgtgaacaaa
gccggggtgggacgtccctccaaagccacagagcctgtcctcactgcagaccctcttgaa
tacacaaggacaatggtggtccaagtggacagaggaaggaccattaccattacaaaagac
gaactggaaggtcaggtcaaagctccttttcctcccacagacgtccgtgcctgcgagctg
agcgacacctacgtggtgctgagctggaccgagcctgaagcccgaggcagggagccgctg
accttctatgtggagcggtccttggcagggaaaagcagctgggaacttgccagtctggac
aaggtggtgaactctcccaggtacccagtgtttgatctggtcaaagacaaacagtattgc
ttcagagtccgctccatcaacaagtatggtgttagcgacccctccgacccgagcccacca
atttcccttggaaagccacaagctgtgccgcctccacctcactcagtcatggccattaga
gatacagacacctcagttctgctgcagtggcaagaaccaaaagacaaagacgacatcgtg
ggatattatctgtactacagtgaagcagaaaaacaggagtggaaaactgccaacaacaaa
cccttaacaacaaccaggtttatagttcacggtctaaagacttggaaggaatatgtgttc
agggtgaaatctgtgagtcgagtaggaaacagcaagtattcagatgagtctcaccccatc
ctggtcaaatcagctattaatgttccctcatctccctctgccattgccctgctgctgtgc
acagaatcagagatagttctgggctggagggctccttcctctaacgggggaagctctgtt
tgcggctactacctggaccagaaggagaagggcatggagatctggagagaggtcaacata
aaacctgccaaagagaagcagctcaaggtatcagacttgaaaactggacatttctaccag
ttccgtgtctttgctgccaatgcagctggtgttgggaaaccgtctgacgccagtgaagca
tttctgtgcgagaagtggacaatgccagaaccaggttgcccgtatgacctggagttcagg
gaagtgagagacgactccctggtgctccgatgggcgtctccgctctatgagggtcaaagt
ccggtcagtggctacatgctggaaatgagccagggaaaccagtcagacaactggacgatt
ctgactgccaaacctgtttctgaaactcattacaaggtgacaggtctgcagacaggtcac
acctactgcttccgtgtgtcggctgttaataatgcaggagttggtcgtgcttccctgccc
tctgagtcggtcacagttcagacccaaccaggaactaaagagattaagatcggtgtggat
gacgatgggtttatatttttgggctatgaggctgttgagatgaacgacgatagcgagttt
atctggagcaaaaattacacagaacccatcgattctcagagaacgaaagcagaaaccaca
aagaacaggtcagttgttaccttcacagacccatctgaggaagatctgggtctgtacact
gtggagatgagtgattgtcctcagctttcatccagctatgattttacagctgaagacctc
gaacgtctcaaagatctcagctggcaggtcagaaacccattgattgcactgaagtcaact
tggcaagtggaggtgtctgagaaaggcaacgtgcgcctttggcttcaaaccgagagtctg
agtgactctgctgaactccgtcttgtttttaacgaccgggaaatctccacctctccacgc
cgcaagataaacttcgacaaggccaaaggtctggtggagatactgtttgatcagctctct
caggaggacgaaggctcgtacaccgctcagctgagggacggccatgccaagaaccaatgc
actttggtctttgtggatcaaaagtttcgtgaaatactggccctggctgactggaatcga
agggacattcagagaaagactggaccttatttccaggaatttttgacatggagtgtgaat
acggattgtgaattaattatacaatgcaaggtgacaaacacgaataaggacacttccttc
aagtggtttaaggatggtctggaaattaaagacctttcttatgatcagacaactgggatt
atctcgctctcaatctcacaggtgacgaagaaagaggccggttcatacagagctgtggtg
tcagacagccgaggagaggatgtcagcaccttggagttactagacaatgagtatgacaag
cttctccagcagctgagtgaacaatgcgcattgtcagctggtccgctgcggattgagagc
actgctgagggtttcaggatctactccagcctcagatactacattggcttcctgaagaca
agctggtacttcaaggggagaaaaattgatcaagagaccaggacaaagccaggcagcagt
atgcagaaagtctggattgaaatgttaaacccaacagagaatgacaaaggtgaatacatc
ttggagatgtttgatggaaaagagacacacaaacggctttatgaattgtccacagaagca
tttgctgaagccttgctggaacaccaaaggttaaagcaactggccattgctgagaaaaat
cgcgccaaagtagtaaaaggccttccagatgttgtagccatcatggagggcaagtctctg
tgtctgacatgcttcattgatggagacccagctcctgagatcttctggctacgcaatgat
agagaaatccttgatcagactcagtttaccattactaaggagtccaagcgcacctccatc
actgtcaacaaggtcaccacggaagattctggaaagtatagtatctttgtgcgcaaccag
tatggctctgaaactgttgatgtgaccttgagtgtgtacaagaagggtgacaaacctcca
gctaatgcagtagagatgggttaa
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