Xiphophorus couchianus (Monterrey platyfish): 114141605
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Entry
114141605 CDS
T05908
Symbol
soga1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114141605 (soga1)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
114141605 (soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Motif
Other DBs
NCBI-GeneID:
114141605
NCBI-ProteinID:
XP_027868048
LinkDB
All DBs
Position
1:complement(8409053..8504899)
Genome browser
AA seq
1890 aa
AA seq
DB search
MTKTKEVDVHNSPTHLSFASPKERRLHLRQKMESGGGTESSDGGQGQHSAPGQPQQHPAA
ETAAQPARTGEKKKINRAPSPARPKDVPGWSLTKIRGGIGSTTLSFKPGAIHLGSRISRR
SPVGSLAGKDGKAERGGGKTVGKSSLLSKTSASKAAKSNSGRRKVSDASTGSDDLSKDSG
CAAGKLSPTDSSSELSDCASEENKLSADAGSSDTESRSSRGAEGEKPLGSRTGQRAAARN
TCSTAEKDEKDRLSLSVETGEDSISPGEERSATSFDSRVPASTSLAFSDLTEEFTDGLHE
EYLREIEELRSENDYLKDEMEELRSEMLEMRDMYMEDDVYQLQELRQQLEQANKTCRILQ
YRLRKAERRSLRVAQTGQVDGELIRTLEQDVKVAKDVSIRIHSQLDSLEKKRSRLEQENE
ELRVRLQDLEVAKQVLQQELDKNSQKKRGARSSNKPDKKPAPQEDNSDLKCQLHFAKEES
ALMCKKLTKLVKDSEAMKEELAKYRSLYGDVNSSLTVEEVADSPHTREAEVRVHLKLVEE
EANLLSRRIMELEVENRGLRAEMDEMKGSQDGHQELSSIGPGTGLGGAVMLGGGASSENI
MELQRHLQFVEEEAELLRRSLIEMEEQNKLLMNEINRYKSELPPATSALSAESLMSLTDG
LLNDSHSVQDGAVLISTDTPAPEEELRLARLQVGELSGKVKKLQYENRVLLSNLQRCDLA
SYHAPSSSSSSSSLRLALETDAEAGDSAEYLPLSPPHRKEPVGGENDAMDMEEQKKKIED
NAEATTPLSGCLGQKDRDALLAMRDQARLVSTAIHLLTSPESNCLSSSSSPSLYHKVCSN
EAAEPCDLEKPQSHCQISELSDLADRPLVGALTSRLQALHTQLQAFVEEVDGLGKPPYGA
RDAQVEGASPPASPCASIPCSGDGQDQENKVEHKQPDYRDQSDPDKKDDTYQSSQSISND
MQNRAAGQLEQEKETDRSTSVQLSDLQAQLSTEKESTRGTLEELERERQNHKGISLRLSQ
LQEEHQKALLRRDFQLQSLGLQARLQQKLWGQERTLLVQESQHLKQALLLLSLKLRCFLK
QWRLGCQKDADGKDVLEINSLKDLYLLLEEESQADKSASADEQPLSPTIKSSAVSSTLAD
LKVALQDLSAELRQERQGSQELTQQFAKAKASWEVERTELKSLITQFETKLGKTTAALSS
AETLDPLDLKVALKKEREEHQHLLAESYAAVMDLTKQLQIGERNWSREKLELLERFSQER
TQWEQRLRDAATQQEKVRRSKPPGDEPTVDTGVVNGSPSPRIKSTLEDSEGNRSSCVKDK
AHFGSMPLFSGSEFGDITVKNWTSITNETPEMADACKTWDGPSGSSSSSAASQMDLDFVQ
RSCTAPDRTGIRIYYSPPAVRRMEHRRRYQEPLDPDQYSVGGSSLKQNDTDGGVASLNAL
DAQQQQPASSFTSSYEQWLSSLSKQHRELLESRGRSISTSMPSVFSSSGEANRVVDGMMS
GSPYHDLEIGDISANLSDDMKEMTNCVRQAIRSSSLERKSSKEPGSQPGGVSNKTTQTVA
QGVSIGLQTETSRATGLHSKSWSPRPTPTTTSSLASARTRQISTSLDKVHSRIERPCCSP
KYGSPKLQRRVSSGSTSRLDGASSSRDRSMWSLHQRAIGGSGGSAWARSTTTRDSPVLNG
LTDGLSSLFSVVEHSGSTESLWRSEIGSSQTASPARQPHAAGKLSGAAVCGSESNSQRYG
GLVQEFFRNVCGSRGPGGAPLSMERVQRDPLAVLGGVGVLGGLNSVDDPTLGGAAALAGL
SGGNDSVTRIVNKRFMRQTAGEEMISIMGGGKEATSNSVAAGPGTEDAPCDCATQSSCFV
RSSRAAARHCKHRPQDSPAGAEEKGDACNE
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaaaggaggttgatgtccataactctccgactcacctctccttcgcctcg
ccaaaggaacggagacttcatctccggcagaagatggaaagcggaggcgggacggagagc
tcggacggcggccaggggcagcactcggcgcccggtcagccgcagcaacaccccgcggct
gaaacggcggcacagcccgcccgcacgggtgagaagaagaagataaaccgggcaccgtct
ccggcgagaccgaaggacgtgcccggttggtcgctcacaaagatccgcggagggatcggg
agcacgaccctgagcttcaagcccggagctatccatctgggcagccgcatttccaggcgc
agccctgtgggcagcctcgctggaaaggacggtaaagccgagaggggcggcggtaaaaca
gtgggaaagtcttcgctgctgtccaagacttcggcgtccaaagcggcaaaaagcaacagc
ggccggaggaaggtgtcggacgccagcacagggtccgacgacctatccaaagactctggg
tgcgccgcggggaagctctccccgacagacagcagctccgagctttcggactgcgcctcc
gaggaaaacaaactctcggcggatgctgggagcagcgacaccgagtcgaggagcagccgc
ggcgcagaaggagagaagccgctcgggagcagaactggtcagcgagcagccgccaggaac
acctgctccaccgcggagaaagatgaaaaggatcggctctctctgagcgtggagaccggg
gaggatagcatttccccgggcgaggagcggtcggccacctcgtttgacagcagggtgcct
gccagcacatccctggcgttctcagacctcacggaggaatttaccgatggcttgcatgag
gagtacctcagggaaatagaagagctgagatctgaaaatgattacctcaaagatgagatg
gaggagctgaggtctgagatgctggaaatgagggacatgtacatggaggatgatgtttac
cagctgcaggaactgcgccaacaactggagcaggcaaacaaaacctgccgcatcctgcag
taccgactgagaaaggcagagcggcgctctctgcgcgtagcccaaacgggccaggtggat
ggagaattgataaggacattggagcaagacgtaaaagtggcgaaggatgtctccatccga
atccacagccagctggacagtttggagaagaagaggagtcggctggagcaggagaacgaa
gagctccgagtccggctgcaggacctggaggtcgccaaacaagtcctgcagcaggagctg
gacaagaactcccagaagaaaagaggagcacgctccagcaacaaaccggacaagaagcct
gctccacaggaagacaattcagacctgaagtgtcagctccactttgccaaagaggagtcg
gccctgatgtgcaagaagctgaccaagttggtgaaggacagcgaggccatgaaggaagag
ctggccaagtacaggtctctatacggagacgtcaacagctcgctcaccgtggaggaggtt
gccgactctccacacactcgcgaagctgaggtcagagttcacttaaagctggtagaggag
gaggccaacctgctgagtcgacgcatcatggagctggaggtggagaacaggggactccga
gccgagatggacgaaatgaagggctcacaagacggccaccaagaactttctagcattggt
ccagggaccgggcttgggggggccgtgatgcttggcggaggggcctcgtccgaaaacatc
atggagctccagaggcacctgcagtttgtggaggaggaggccgagctgctgaggaggtct
ctgatcgagatggaggagcaaaacaaactgctgatgaatgagatcaaccgctacaaatcc
gaactcccgcctgcgacgtccgcgctgtccgccgagtcactgatgtctctgacggatggg
ctgctgaacgacagccactcggtccaggacggggccgtgctcatcagcaccgacacgccg
gctcctgaggaggaactgaggttggcgaggctccaggtgggagagctgagcgggaaagtg
aagaaactgcagtacgagaaccgtgtgctgctgtccaacctgcagcgctgcgatctcgcc
tcgtatcacgctccttcttcctcgtcctcctcctcctcgttgaggctggctttggagaca
gatgcagaagcaggagactcagctgagtacctccctctcagcccgcctcatcgcaaagag
ccagtaggtggtgagaatgacgccatggacatggaggaacagaaaaagaagatcgaggac
aacgctgaggcaacgactccgctctctgggtgcctggggcagaaggaccgtgatgccttg
ttggccatgagggaccaggctcgtttggtttccactgccatacatctgctgacctccccc
gagtccaactgcctgtcctcctcctcctctccctcgctgtatcacaaggtctgcagcaat
gaggcagcagagccgtgtgacctggagaaacctcagtctcactgccagatctcggagctt
tccgacttggcggaccgtcctctggttggtgctctgaccagcaggcttcaggccctgcac
acccagctgcaggcctttgtagaggaggtggatggcctaggtaaacctccatatggggcg
agagatgctcaggtggaaggggcgtcccctccagcgtcaccctgcgcttccatcccctgc
tccggagacggccaggatcaagaaaacaaagtcgagcataagcagcctgattatagggac
caatcagatccagacaagaaagatgacacttaccagagcagccaatccatcagcaacgac
atgcaaaatcgggcagctggacaattggagcaggagaaggagacggatcgttccacgtct
gtccagctcagtgacctgcaggcgcagctgtccacagaaaaggagtcaaccagaggaact
ctggaggagctggagagagaaaggcagaaccacaaaggaatcagcctgagactctcacag
ctccaggaggagcaccagaaggcccttctccgacgggacttccagcttcagagcctgggc
ctgcaggctcgacttcagcagaagctgtggggtcaggagaggactctgctcgttcaagag
tcccagcacctgaaacaggctctgttgctgctgagtctgaaactacgctgcttcctcaaa
cagtggaggctgggctgccagaaggatgcagatgggaaagatgtgttggagataaacagc
ctgaaggatttgtacctgctgctggaggaggagagccaggcagataagagtgcctctgca
gatgaacagcctctcagcccgactataaagtcaagtgctgtgagcagcactttggcagac
ctaaaggttgctctgcaggacctgagtgcagagttgagacaagagagacaaggctcccag
gaacttactcagcagttcgcaaaggccaaagcatcatgggaggtggagagaaccgaacta
aagagcctcatcacgcagtttgagaccaaactcggaaaaaccacagcagcactgtcctcc
gctgaaacactggaccctcttgacctgaaggtggctcttaaaaaggagcgtgaggagcac
cagcacctcctcgccgagtcgtacgcagccgtgatggacttaaccaaacagcttcagatc
ggagagaggaactggagcagagagaagctggagctgctggagaggttcagccaggagaga
acgcagtgggaacagaggctgagagacgctgccacacaacaggagaaggtgcgaaggtcg
aagcctccgggagacgaacccaccgtggacacgggtgttgtaaatggatcgccatcgccg
aggatcaaatctacactggaggactcagagggtaacagatcttcctgtgtgaaggacaaa
gcacattttggttcaatgcctctttttagtggatccgagtttggagatataaccgtgaag
aactggaccagcataaccaacgagaccccagagatggctgatgcctgtaaaacctgggat
ggtccaagcggttcttctagcagctccgcggcctctcagatggacttggactttgtgcag
aggagctgcactgctccggaccggaccggcatccgtatctactacagccctcctgctgtg
aggcgtatggagcaccggagaagataccaggagcctctagatcccgatcaatacagcgtt
gggggctcctctctgaaacagaatgacacggatggtggcgtggcttcactaaacgcactc
gatgctcagcaacaacaacccgcctcatcgtttacctcttcctatgagcagtggctcagc
tcactgtccaagcagcaccgggagctgctggagagcagaggcagaagcatttccacgtcg
atgccgagcgttttcagcagcagtggggaggctaacagggtggtggacgggatgatgtcc
ggttctccctaccatgacctggagatcggagacatctctgccaacttaagtgatgacatg
aaggaaatgactaactgtgtccggcaagctattcgctcttcttctctggagaggaaatcc
agcaaggagcctgggagtcagcccggtggagtatccaacaagaccacccagactgtagct
cagggtgtcagcatcgggctgcagacagagaccagcagggcaacggggttgcactccaaa
tcctggtcacctcggccaacgccaacaaccacttcctcactggcatccgcccgaactcgg
cagatttctacatctctggataaagtgcacagccgcatcgagaggccatgctgttcgccc
aagtatggatcgcctaagctacagcggagagtgtcttctggttccacttccagactggac
ggcgcttcctccagcagggaccgcagcatgtggagcctacatcagagggccatcggtggg
agtggcggctctgcttgggctcgctccactacgacgagggacagccccgtcctgaacggc
ctcaccgacggcctctccagccttttcagtgtagtggagcactccggaagcacagagtcg
ctttggaggagtgaaatagggtcaagccagacggccagcccggctcggcagcctcacgct
gccggaaaactctccggtgctgctgtttgcggctccgagtccaactctcagcggtatgga
gggctggtgcaggagttcttcaggaatgtgtgcggcagccgcggcccaggtggagccccc
ctgtccatggagagagtgcagagagaccccctcgctgtcctcggaggcgtgggtgtcttg
ggcggcttgaacagcgtggacgaccccacactcggaggggctgctgcgctggctggactg
agtggaggcaacgacagcgtgaccaggattgttaataagcggtttatgaggcagacagct
ggggaggagatgatcagcatcatgggaggagggaaggaagcaacgagcaacagcgtggct
gcaggaccgggaaccgaggatgcaccttgcgattgtgctacccagtcctcctgctttgtc
cgatcgtctagagcagctgctcgccactgcaagcaccgcccacaggactctccagctgga
gccgaggagaaaggagacgcctgtaacgagtga
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