Xiphophorus couchianus (Monterrey platyfish): 114141657
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Entry
114141657 CDS
T05908
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xco03009
]
114141657 (nop2)
Enzymes [BR:
xco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
114141657 (nop2)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
114141657 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
PCMT
Methyltransf_31
DUF383
Motif
Other DBs
NCBI-GeneID:
114141657
NCBI-ProteinID:
XP_027868137
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All DBs
Position
3:complement(12892952..12899686)
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AA seq
755 aa
AA seq
DB search
MGRKLDPTNKVKRGPGKKAKKQQGAEVELANFIDTEEDAGPKRLSSRSRKRAAKRVENLK
KPENVAEKQPKKGYSDDNSKWLKPTKRKRKMDEPESEDDSEEMWEDEEEEEQVLLPKKGG
KEQEKKSADLGLKNLEDDDDEEEMVDDYGAEDDGSGQEEEDEEENSDGDDLLPIERAAKK
EKKLKESMGLSSDDDNEEEEEDDDDSDEKHESDSDMYEEETIQTNADDFDTFRLPSAEES
EKEGALSLDLKGVHQRIKDNIDVLCNFSAKREEGKARVDYLSLLRKDLCTYYSYNEFLVE
KLMDLFPLSELVDFLEANEIQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGL
VIYDSSVPIGATPEYLAGHYMLQGACSFLPVMALSPQEGELVLDMSSAPGGKTSYMAQLM
RNTGVIVANDANAERLKSVVGNLHRLGVTNSVVSNYDGRQFPKVMGGFDRVLLDAPCSGT
GVIAKDPAVKTSKDEPDILRSAHLQKELLLSAIDSVNATSSTGGYLVYCTCSIMVEENEW
VVDYALKKRNVKLVPTGLDFGKEGFTSFKKFRFHPSLQLTRRFYPHSHNMDGFFVAKFKK
FSNVTPSASVGKEDETTEASEATEATDSPKDNPSKSKAANETVLAKTDALKQNAKANGAA
AKKPANIKIKGQQGSQTGPKKAKIAKMDGETVKGAQAKNPANKTPVQTTVPKTVKKDGSR
FEKKQPKKGKSPLKMKNKMGKNKFKKMKHKFQKNK
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagcttgatcccaccaacaaggtgaagagggggccgggtaagaaagccaaa
aagcagcagggagcagaggttgagttggccaacttcatagatacagaagaagatgcagga
ccaaaacgtttgtcaagtagatccagaaaaagagctgctaagagagttgagaacctgaaa
aagccagaaaatgttgctgagaaacaacccaaaaaaggatacagtgatgacaacagtaaa
tggttgaaacctacaaagaggaagcgcaaaatggatgagcctgaaagtgaggatgacagc
gaggagatgtgggaagatgaggaagaggaagagcaggtgcttctgccgaagaagggagga
aaagaacaagaaaaaaaaagtgcagatttgggattaaaaaacctggaagatgatgatgat
gaagaagaaatggttgacgactatggtgcagaagatgatggcagtggacaggaagaggaa
gacgaagaggagaacagtgatggagatgatcttcttccaatcgaacgtgctgccaaaaaa
gagaaaaaactgaaggaatccatgggtctaagcagtgacgatgataatgaagaggaggaa
gaggatgatgacgatagtgatgaaaagcatgaatcagattctgacatgtatgaggaggaa
acaatccaaactaacgcggatgattttgataccttccgacttccctcggctgaggagagt
gagaaggagggtgccctgtctctggacctgaagggagtccatcagagaataaaggacaac
attgatgtcctctgtaatttctcagcaaaaagggaagaggggaaagccagagtggattac
ctctctcttctgaggaaagacctttgtacttattatagctacaacgaattcctcgttgag
aaattaatggacctcttccctctctcagagcttgttgacttcctggaagccaatgaaatt
cagagaccagtcacaattcgaaccaacacgctgaaaacaaggaggcgggaccttgcacag
gctctgatcaacagaggagttaacctggacccactggggaaatggtccaaagtgggtttg
gtaatctatgactcctcagtacctatcggtgcgaccccggagtatctggccggtcattac
atgctgcagggagcctgcagctttcttcctgttatggcgctctctccacaggagggggag
ctggtgctggacatgagctcggcccctggaggaaagacctcctatatggctcagctgatg
agaaacacaggagtgatcgtagctaatgatgctaatgctgaaagactgaagagcgtggtg
ggaaaccttcaccgcctcggggtcactaactccgtggtcagcaattacgatggcaggcag
ttcccaaaggtaatgggagggtttgacagagtgctgcttgatgcaccatgctcaggcaca
ggagttattgcaaaagatccagctgtaaagaccagtaaggatgagccggatattctgcgc
tctgctcatttgcaaaaagaactgcttctatcagctatcgactccgtgaatgcaacgtct
tctactggaggatacctggtctactgcacatgctcaataatggtggaggagaatgagtgg
gtggtggactacgctttgaagaaaaggaatgttaaactagtcccaaccggacttgatttt
gggaaggaaggcttcaccagtttcaagaaatttagattccatccttccctgcaactcacc
cgccgtttttacccacattcccacaacatggatggattttttgtggccaaatttaagaag
ttctctaatgtaaccccatcagcttcagttgggaaagaagatgagacaacagaagcttct
gaggcaacagaagctacagattctccgaaagataacccgtccaaaagcaaagcagctaat
gaaactgtgctagcaaagacggatgccctaaagcaaaatgccaaagctaatggagcagca
gctaaaaaaccagcaaacatcaagataaaaggacaacagggctctcagactggaccaaag
aaggcaaagattgccaaaatggatggagagactgtgaaaggagcccaggcaaagaaccct
gcaaacaagactcctgtccagacaaccgtaccaaagactgtcaaaaaagatggaagtaga
tttgagaaaaagcaacccaaaaaggggaaatcacccttgaagatgaagaacaagatggga
aagaataaattcaaaaagatgaagcacaagtttcaaaaaaacaaataa
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