Xiphophorus couchianus (Monterrey platyfish): 114141662
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Entry
114141662 CDS
T05908
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
114141662
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
114141662
NCBI-ProteinID:
XP_027868149
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Position
1:13470503..13487722
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AA seq
822 aa
AA seq
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MGLLLHCLLLLAVCALPAGGLDFQPGSKALGQPVFVRRSVERRAAQIAKRSLPSWPGASH
HHRIRRRSVDQGESCKKHEGYQSKLKDNTHSYTLNDLSGSVSLAWVGDGTGVILALTTFQ
VPIFLLRFGQSKLYRSENYGKSFEDVTNLINNTFISAEFGIAIGPENSGKVILTAEISGG
DGYRIFASSDFGKTFAHLNLPFNPMMQISYNPENSNVLAVLSMRNELWLSEDFGRNWKKI
SDMVCLFKWGRKNTIFFTSSQNGSCSDRGMLQLKRTTDLGKTIKTVASKIFSFGLGGRFL
FASVMTGKGTMRMIHVSVDQGENWNMAQLPPVGHEQFYSILAANDDMVFMHVDEPGDTGF
GTIYVSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFITSVLAEDTSVQSVVSFDQ
GGEWVPLQRPANTKCDATAKDPDKCSLHIHAAYSIAMKLDVPMPPLTEPNAVGLIIAHGS
VGDAISVMKSDVYVSDDGGYTWIKALNGPHHYAMLDSGGLLVAVEDNGKPINKIKFSTDE
GQCWSIYEFTKEPISFTGLASEPGARSMNVSIWGYKDSLITQNWVSFTIDFRELLTRDCN
DDDYVQWLAHSDDISDPTDGCMLGYKETFLRLRKDSVCWNGRDYTVNTQPTPCACTLDDF
LCDFGYSRKENSSECVEQPDLQGKVLEFCLHGKEEQLQTKGYRKIPGDKCEGGQMPQRKE
IDLSKRCVSDLVSPELQTDGHSSKSVAILLAVVVVMLLSVAAGVVFVRKYVCGGRFLVHR
YSVLQQHVEDNAADGIDEPLDTNHAPNGKIEFHDDSDEDLLE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggggctcctgctgcattgtctcctgctgctcgccgtctgcgctctcccagccggtggc
ttggatttccagccgggatccaaagctctcggacagccggtgttcgtgaggcgctccgtg
gagaggagagccgcgcaaatcgcgaagaggtccctgccgtcgtggccgggcgcatcgcac
caccacaggatacggcgaaggagcgtcgaccagggcgagtcgtgcaaaaagcacgaaggg
tatcagagcaagttaaaagacaacacccacagttatacactgaatgacctgagtggctcc
gtgtcactggcctgggttggagatggcacaggggtcatactggctttgaccacatttcag
gtgcctatcttcttgttgagattcggccagtccaaactctaccgtagtgagaactacggg
aagtcgtttgaggacgtgaccaacttaatcaacaacacgttcatttcagcagagtttggc
atagcaatcggccctgagaattcaggcaaagtgatcctgacagctgaaatctctggagga
gatgggtatcggatttttgcctccagtgactttgggaagacttttgcccacctgaacttg
cctttcaatcccatgatgcagatctcatacaaccctgagaactccaatgtgctggcagtc
ctcagcatgaggaatgaactttggctttcggaagattttggacgcaactggaagaaaatc
tccgacatggtgtgcctttttaaatggggaagaaaaaataccatcttcttcacaagcagc
caaaatggatcctgcagtgacaggggaatgttgcagctaaagagaaccacagacttgggt
aaaaccatcaagactgttgccagcaagatcttctcttttggcctgggtggacgcttcctc
tttgcttcagtaatgacgggaaagggcactatgaggatgatccacgtgtctgtggatcag
ggtgagaactggaacatggctcagctccctccggttggccatgagcagttctactccatc
ctggcagcaaatgacgatatggtcttcatgcatgttgacgagcctggagatactggtttt
ggtacaatttatgtttcggacgatcgaggcacggtctactccaagtcactggagcgtcat
ctttatacgacgacggggggcgacaccgacttcaccaacgtcacttccctgagaggagtc
ttcatcaccagtgtgttggcagaagatacctctgtgcagtctgtggtgtcctttgatcag
ggaggagagtgggttcccctgcagagacctgccaacaccaagtgtgacgctacagccaag
gatccagacaagtgcagtctccacatccatgcggcttacagcattgctatgaagctggac
gtccccatgccgcccctgacggagccaaacgctgtgggtctaatcatagctcatggcagc
gtcggggacgccatctctgtgatgaagtcggatgtttatgtgtccgatgatggaggctac
acctggataaaggctcttaatgggccccatcactacgccatgctggactcaggagggctg
ctggtggctgtggaggacaatggcaaacccatcaacaaaatcaaattttccaccgatgaa
ggacagtgctggagtatttacgaattcaccaaagagccaatctcgttcacggggctggct
tcagagccgggagctcgctccatgaatgtcagcatctggggctacaaagattccctgatc
acccagaactgggtctccttcaccatcgacttcagggaactgctcaccagagactgcaac
gacgacgactatgtgcagtggttggcccactctgatgacatcagtgacccgacagatggc
tgcatgctgggttacaaagagacgttcttgcggctcagaaaggactccgtttgctggaat
ggacgtgattacactgtgaacacacagccaactccatgtgcatgcaccctggacgacttc
ttgtgtgactttggatactcgcgtaaagagaacagctctgagtgtgtggagcagccggac
ctgcagggcaaagtgttggagttctgcctgcatggcaaagaggagcaactgcagaccaaa
gggtacaggaaaatccctggagataaatgtgaaggaggacagatgcctcaacgtaaagag
attgacctcagtaagaggtgtgtcagtgatcttgtatctccagagcttcagacagacggt
cactcctccaagtctgtggccatactgttagcggtcgtcgtcgtcatgctgctgagcgtc
gcagcaggagtggtctttgtcaggaagtacgtctgcggcggcaggtttttggtgcacagg
tactctgtgctgcagcaacacgttgaggacaacgctgcagacgggatagatgagccgctg
gacaccaaccacgcccccaacggcaaaatagagtttcacgatgactctgatgaggatctg
cttgaatag
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