Xiphophorus couchianus (Monterrey platyfish): 114141692
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Entry
114141692 CDS
T05908
Symbol
dennd4b
Name
(RefSeq) DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114141692 (dennd4b)
Membrane trafficking [BR:
xco04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
114141692 (dennd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
114141692
NCBI-ProteinID:
XP_027868194
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All DBs
Position
3:398007..421882
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AA seq
1502 aa
AA seq
DB search
MTDEKCPQLVDYFVVAGLDPAGPWRSLDEDGRASSSSSSSSPAAAVRAADPVTDLAVIAR
GLGEEVPEGFTCIEKTLGGHSAELSASLINNPHLYLCYRRGRDKPPVLDLGVLYEGKEQL
KQGWYVIETTPYSRSASLSSGGAPTAHRVFLMYRRALDSQGLHTLGVTDIALLMPGKGEV
APHTFCRVDKNLNTGMWGPALHVCYKRAVAKANALVFEAGLISRYPEEDLEAFPLPESVP
VFCLPMGVTVESWPLNSKYQLPVFSTFVLTSASGDKVYGAAIQFYESFSRDLLSERQNVR
LGLLSVVDRRPITSRSLHAKRSICVLSHWPFFTVFQKFLTFIYRYSISGPHVLPLEKHIS
SFMHNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASFLKLLQNLGPENSCTLLL
AVLTEHKLLLHSLRPDVLTSVSEALVSMTFPLRWLCPYIPLCPLQMADVLLAPMPFIVGV
HSSYFDLYDPPPEVVCVDLDTNTVFQSEDKKPLSWRSLPRKHGKTLFVTLTNLHRTLEKI
CSPGQEEATLEFLLTDYDQIYRRQKQLELEIQEAFLRFMSCLLRGYRAFLLPITQAPSDT
TTDCSSLFNLQGFLKSRDRSQQKLYAQLSRTQMFTQFIEECSFVSDRHACLEFFDECVQK
VDVEKPEEVRLIDLDENGGGEHTVFIMPPEEPQEADGAECPARYSYETFPRLTAELFDRP
QDPLRAPTRGSAPSSPAPRRTKQEMKVAQKRAQKYSAVPDMWSKCLLGHCYGLWFIYLPT
FVRAEGSKVRALHSAHDVLRHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKK
AGITPNTITYGYYNKAVLECKWPSTNQGGRLRWAKLRNVLLAVAQFRQPIKRRRKSGSVG
SRGAMMELDQKPRLQSALIRQSSWSGLSESSSHESLTGSLVKSSSLSSMKTPTVSELKVC
KKSPVLHGSGTNGDTVHRKPPLGRREASAPPAAPPEGVVVRRSQVCLSTFYTESELDCRC
EPRLSRSDRSGNSGGKNKARTVDENSNHVSSPSRGGLAGKLQQLLTPTKNRASVRRAASV
ENRWSGGGIGRKVSDQRQSRKSQGPESLLKAKERLVNATSESSLSVGSDLDLSDTPTTVY
PLRKSWDANQEGAGIEVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCAASFV
PFLNAEICDPGPVSSAERCTMNLEDEVESAVRPPSSHEASQRPQCNGLSDDSSSETSTYS
ETSKATTVSSVGGTPQVTVAYLSPLVLRKELESLLENEGESVLAQPQFLDSHSIIFWNLV
WYFQRLGLPSNLLQLVRSSPLVSHFTQSENSAVRIRLLWDTLSPDTDQWPPLYVLWRIHS
GAPMRSYSWRRHNHPFTLSFLEEVLRWVGMNEVHKAITLFLDTLEKQPGSPQTQRSLYRE
MLFLTLAAMGKDHVAAFDKKYKTAFLRLSSSLGRDQLRRKRAQPPSTKAVDCRRSFHPPL
EC
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgagaaatgtccccagctggtggactacttcgtggtggcgggcctggacccc
gccgggccctggaggtccctggacgaagacggccgggcctcctcctcctcctcctcttct
tcaccagcggcggcggtccgggcggcggatccagtgacggacctggcggtgatcgctcgc
ggtctgggggaggaagtgccagaaggtttcacctgcatagagaagaccctggggggccac
tcggccgagctgagcgccagcctcatcaacaacccacacctctacctgtgctaccgccgg
gggcgggacaaaccaccggtcctggacctgggggttctgtatgaggggaaggagcagctg
aagcagggctggtacgtcatcgagaccacgccctacagccgctcggccagcctgagctct
ggcggcgcccccacggcccaccgggtcttcctcatgtaccgccgggccctggactcacag
ggcctgcacacgctgggcgtcaccgacatcgccctgctgatgcccggcaagggggaggtg
gcgccgcacacattctgtcgggtcgacaagaacctcaacacgggcatgtggggtccagct
ctgcacgtctgctacaagagagccgtggccaaagccaacgccctggtgttcgaagccggt
ctgatcagccggtatccagaggaggacctggaggcgttccctcttcccgagtcggtgccg
gtcttctgtctgccgatgggcgtcacggtggagagctggccgctgaactccaaataccag
ctgcccgtcttttccacctttgtcctcacgtcagcctccggagacaaggtctacggcgct
gccatccagttctacgagtcgttttccagggatcttctgtccgagcggcagaacgtccgg
ctcggcctgctcagcgtggtggaccgccggcccatcaccagccgcagtctgcacgccaag
aggagcatctgcgtcctgtcccactggcccttcttcaccgtcttccagaagttcctcact
ttcatctacagatactccatctccgggcctcacgtcctgccgctcgagaaacacatctcc
agcttcatgcacaacgttccattcccttcccctcagcgtccgcggatcctcgttcagctc
tctccgtacgacaacctgctgctctgccagccggtctcctccccactcccactcagcggt
gcaagcttcctgaagctgctccagaacctgggtccagagaactcctgcacactgctgctt
gccgtcctcaccgaacacaagctgctgctgcactcgctgcgacccgacgtcctgacctcc
gtcagcgaggccctcgtctctatgaccttcccgctgcgctggctctgcccctacatccct
ctgtgcccgctgcagatggccgacgtgctgctggcgcccatgcctttcatcgtcggcgtt
cactccagctactttgacctctacgaccccccgccagaggtcgtctgcgtcgacctggac
accaacaccgtcttccagtcagaggataagaagccgttgtcgtggcgatcgctacccagg
aagcacggaaagacgctgttcgtcacgctgaccaacctgcaccggaccctggagaagatc
tgcagccccggccaggaggaggcgacgctggagttcctgctcaccgactacgaccagatc
taccggcggcagaagcagctggagctggagatccaggaggccttcctgcgcttcatgagc
tgcctgctgcggggctaccgcgccttcctgctgcccatcacgcaggcgccgtccgacacc
accaccgactgcagctccctgttcaacctgcagggcttcctgaagtctcgggaccggagc
cagcagaagctgtacgcccagctgagccggacccagatgttcacccagttcatcgaggaa
tgctccttcgtcagcgaccgccacgcctgcctcgagtttttcgacgagtgcgtccagaag
gtggacgtggagaagccggaggaggtgcggctgatcgacctggacgagaacggcggcggc
gaacacaccgtcttcatcatgccgcccgaggagccgcaggaggctgacggcgccgagtgc
cccgcccgctacagctacgagacgttccccaggctgacggcggagctgttcgaccgaccg
caggacccgctgcgcgccccgaccagaggcagcgcccccagcagccccgccccccgccgc
accaagcaggagatgaaggtggcccagaagcgggcccagaagtactcggcggttccggac
atgtggtccaaatgcctgctgggtcactgctacggcctgtggttcatctacctgcccacc
ttcgtccgggccgaaggctccaaggtccgcgccctgcactccgcccacgacgtcctccgg
cacatggagacccgcaaggtggtgctgcccgacgaggtgtgttaccgcatcctgatgcag
ctctgcggtcagtacggccagccggtcctcgccgtcagagtcctgctggagatgaagaag
gccgggatcacgcccaacaccatcacctacggatactacaacaaggctgtgctggagtgt
aagtggccctcgaccaatcagggcggccgtctccgctgggctaagctacggaacgttcta
ttggccgtggctcagttcaggcagccaatcaaacggcggcggaagagtggttctgtgggt
tccagaggagccatgatggagctcgatcagaagccccgcctacagtccgctctgattcgt
cagtccagctggagcggcctgagcgaaagctcgagtcacgagtctctgaccgggtcgctg
gtgaagagctccagcctgagcagcatgaagacgcccacagtcagtgagctcaaagtctgt
aagaagtcccccgtcctccacggttccgggacaaacggggacacggtccaccggaagccc
ccgctgggacggagagaagcctctgctccgcctgcagcgccccctgagggagtcgtggtg
cggcgcagtcaggtctgcctttccaccttctacaccgagtcggagctggactgcagatgt
gaaccgaggctcagcagatccgacagatccgggaactccggtggaaagaacaaggccaga
accgtagacgagaactccaaccacgtgtcgtccccaagccgaggaggcctggcagggaaa
ctgcagcagctcctcacaccgaccaaaaaccgagcgtcggtccggcgcgccgccagcgtg
gaaaaccgctggtccggaggagggatcggtcggaaagtgtcagatcagaggcagtccagg
aagtcccaggggcctgaaagtttgctaaaggcaaaggagcggctggtgaacgccacatca
gagagctcgctgtcggtaggaagtgacctggacctgtcggacacgcccaccacggtgtat
cctctgcgcaagtcgtgggacgccaaccaggagggggcaggaatcgaggttctgatgtcc
agctgctcgctgtgccgcagctgcaactctctggtgtacgacgaggagatcatggcgggc
tggacctcggacgactccaacctgaactcgtcctgcccgttctgcgccgcctccttcgtc
ccgttcctgaacgcagagatctgcgacccggggcctgtcagcagcgcggagcgctgcacc
atgaacctggaggacgaggtggagagcgccgtgaggccccccagtagtcacgaggcgtcc
cagcggccccagtgcaacggactgagcgacgactccagctctgaaaccagcacctactcc
gagaccagcaaggccaccacggtgtcgtcagtgggagggactcctcaggtgacggtggcc
tacctgagccctctggttctgaggaaggagctggagagtctgctggagaacgagggcgag
tcggttctggcccagcctcagtttctggacagccactccatcatcttctggaacctggtc
tggtacttccagcggctcggcttgcccagcaacctgctgcagctggtccggagctcgccg
ctggtcagccacttcactcagtcggagaactctgcggtgaggatccggctcctctgggac
acgctgagccccgacaccgaccagtggccgccgctctacgtcctctggaggatccacagt
ggcgccccgatgaggagctacagctggaggcggcacaaccacccgttcaccttgtccttc
ctggaggaggttctgcgctgggtgggcatgaacgaggtgcacaaggccatcacgctcttc
ctggacaccctggagaagcagcccgggtcgccacagacccagaggagtctctaccgagag
atgctgttcctgacgctggcggcgatgggaaaggaccacgtcgctgcattcgataagaag
tacaagacggcgttcctgcgcctcagcagctccctgggccgggaccagctccgcaggaag
cgggcccagcctcccagcaccaaagccgtcgactgcagacgcagcttccacccgccgctg
gagtgctga
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