Xiphophorus couchianus (Monterrey platyfish): 114141752
Help
Entry
114141752 CDS
T05908
Name
(RefSeq) filamin-A-like isoform X1
KO
K04437
filamin-A
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04510
Focal adhesion
xco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114141752
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114141752
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114141752
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114141752
04147 Exosome [BR:
xco04147
]
114141752
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
114141752
Intermediate filaments
Intermediate filament-binding proteins
114141752
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114141752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
GBD_IRG7_N
Big_3_5
CFSR
Invasin_D3
CarboxypepD_reg
CH_2
Motif
Other DBs
NCBI-GeneID:
114141752
NCBI-ProteinID:
XP_027868354
LinkDB
All DBs
Position
1:complement(5761848..5816977)
Genome browser
AA seq
2539 aa
AA seq
DB search
MSGSHPRLHQSAAPAPNDKDAEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCVNKRIG
NLQTDLSDGLRLIGLLEVLSQKKMFRKYNQRPTFRQMQLENVSVALEFLDRENIKLVSID
SKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEEADDGKQKTPKQRLLGWIQNKLPELP
ITNFNRDWQTGRALGALVDSCAPGLCPDWDQWDQTKPVDNAREAMQQADDWLGIPQVITP
EEIVDPNVDEHSVMTYLSQFPKAKLKPGAPLRPKLNPKKARAYGPGIEPVGNVVMKKAMF
TVETISAGMGEVLVYVEDPAGHREEAKVTANNDKNRTYSVVYTPKVMGMHKVTVLFAGQH
ISKSPFEVDIGMAQGNSSKVTAQGPGLEPSGNIANKATYFDVYTAGAGVGEVEVEVMDPA
GKKNTVPCTIEDKGNSSYRCTYKPTQEGQHTIFITFAGGQISKSPFTVDVGEACNPSLCR
AKGRGLQPKGLRVKETADFKVYTKGAGTGELKVTIKGPKGIEEPCKRKDLGDCVYGFEYY
PTTPGTYSITITWGGQHIPRSPIEVKIGSEAGQQLVRAWGPGLEGGIVGKSADFVVEAVG
QNAGTLGFSVEGPSQAKIECDDKGDGSCDVRYWPTEPGEYAVHVLCNNEDIQHSPFMAEI
VNALGKDFYPDKVKAYGPGLQSSGLAVGKPTEFTVDTKQGGSAPLKIVAQDGEGNPVDVQ
VKDNGNGTYTCTYTPRKPVKHTVMVSWGGVNIPESPFRMNIGAGCHPNKVKVSGPGVAKT
GLKAFEPTYFTVDCSEAGQGDISIGIKCAPGVVGPAEADIDFDIIRNDNDTFTVKYTPPG
AGSYTIMVLFAEHAIPMSPIRVKVDPSHDASKVKAEGPGLSRSGVELNKPTHFTVNTKGA
GKASLDCSFSGPTKAEAVKDFEVINNHDNTHTVKYTPVQQGPLGVAVTYGGDHIPKSPFN
VAVAPTLDLSKVNVTGLGDKMTVGKDQEVTVKSKGAGGQGKVAAKVTGPSGKPVTCKVEP
GLSPETSQVKFIPREAGPYQVELTYDGVPIPGSPYTPTAYPPTDPSKVRCSGPGLERAKV
GETGEFVVDCTNAGPAELTIEIISDSGTEAEVHIQDNGDGTYTITYIPLYPGSYTLTIRY
GGQDVPNFPARLTVEPAIDASGVRVFGPGVEGKGVFRDATTDFTVDARALTQNGGDHIKT
RISSPSGSCPDAVITDHGDGMYAVEYTPYEEGPHSVEVCYDGSPVPKSPFRVAVTEGCDP
ARVRVHGPGLKSGITNKPNKFMVETRGAGTGGLGLAMEGPSEAKMSCTDNKDGSCSVEYI
PYEPGTYNLNITYGGQPVKGSPFSVPVSDTVDSTKVKCQGPGLSSNVRANIPQEFTVDAS
KAGVAPLQVRVQGPKGVVEPVEVVDNGDQTHTVNYVPTREGPYSINVLYADEEIPRSPYK
VKVLPTHDASKVRASGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITDPEGKPKKAKI
RDNHDGTYLVSYVPDMTGRYTILIKYGGDEIPYSPYRIRALPTGDASKCTVTVSIGGHGL
GAGVGPTIQIGEQTVITVDAKAAGKGKVTCSVCTPEGAELDVDVVENEDGTFDIFYTAPQ
PGEYVICVRFGGEHIPNSPFQVTALEGPSDQLMQQRQMPQYYAQQPWATDRPVGMNGLDV
TGLRPFDLVIPFTIQKGEITGEVRMPSGKVAKPDITDNKDGTVTVKYGPTEAGLHEMDIK
YDGIHIPGSPLQFFVDYMNSGNVSAYGPGLIHGTVNKPAVFTVDTKDAGEGGLSLAIEGP
SKADISCMDNQDGTCTVSYLPVLPGDYSILVKYNDKHIPGSPFSARITGDDSMRMSHLKV
GSAADIPLDIGELDISQLTASLTTPSGREEPCLLKILRNGHVGVSFVPKEIGEHLVNIKK
NGRHIANSPISVMISQSEIGDASRVRVSGQGLSEARTFEPAEFIIDTRDAGYGGLSLSIE
GPSKVDINTEDQEDGTCKVTYCPTEPGNYIINIKFADQHVPGSAFTVKVTGEGRMKESIT
RKKRAASVANVGSQCDLSLKIPEISIADMTAQVTSPSGQVHKADIMEGENNTYCIRFVPT
ETGVHTVCVKYNGMHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFSIWTRE
AGAGGLSIAVEGPSKAEITFEDRKDGSSGVSYIVQEPGDYEVSIRFNDEHIPDSPFIVPV
ASPSDDARRLTVASLQESGLKVNQPASFAVSLNGAKGVIDAKVHSPSGALEQCCVTEIDQ
DKYAVRFIPRENGLYLIDVKFNGSHIPGSPFKIRVGETGQAGDPGMVSAYGPGLEGGTTG
TACEFVVNTSTAGPGALAVTIDGPSKVKMDCVECPEGYKVTYTPMAPGNYLISIKYGGPY
HIVGSPFKAKITGSKLVSSHSMHETSSVMVDPVTRAISGSQQATPTHSDASKVTTKGPGL
TKAFVGQKNNFCVDCSKAGRNMLLVGVDGPKVPCEEILVKHMGNRVYNVSYQLKEKGEYI
LVVKWGDEHIPGSPYHLTV
NT seq
7620 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctcccacccccgcctccatcagagcgccgcgcccgctcccaacgacaaggac
gcagaaatgcccgccacggagaaggacctggccgaggatgccccgtggaagaagatccag
cagaacacgttcacccgctggtgcaacgagcacctgaaatgcgtcaacaagcggatcggc
aacctgcagacggacctgagcgacgggctgcggctcatcgggctcctggaggttctgtcc
cagaaaaaaatgttccgcaagtacaaccagaggcccaccttccgccagatgcagctggag
aacgtgtcggtggcgctggagttcctggacagggagaacatcaagctggtgtctatagat
tctaaagccattgtggatgggaacctgaagctgatcctgggtctgatctggaccctcatc
ctgcactactccatctccatgccgatgtgggatgaggaggaagaggcagatgacggcaag
cagaagactcccaagcagaggctgctgggatggatccagaacaaacttcccgagcttccc
atcaccaacttcaacagggactggcagactggccgggccctgggagccctggtggacagc
tgcgccccaggtctgtgtcctgactgggatcagtgggatcagaccaaaccagtggataac
gcccgtgaggccatgcagcaagctgatgattggctgggcatccctcaggttatcacccca
gaagagatcgtagaccccaacgtggacgagcattcagtcatgacctacctgtcccagttc
cccaaagccaagctgaagcctggggctcctctccggcccaaactcaaccccaagaaggcc
cgcgcctacggcccagggattgagccggtgggaaatgtcgtgatgaagaaggcgatgttt
accgtcgagaccatcagtgcggggatgggagaggtgctggtttacgtagaggatcctgca
ggacacagagaggaggccaaagtgacggcgaacaacgacaagaaccgcacctactctgtt
gtctacacccccaaagtgatgggcatgcacaaggtgactgttttgtttgcggggcagcat
atttcaaagagtccctttgaggtggacatcggcatggctcagggcaactccagcaaggtg
acggcccagggccctggcctggagccgtcgggcaacatcgccaacaaagccacctacttt
gatgtctacacagcaggtgctggtgtcggagaagtggaggttgaggtcatggatcctgca
ggaaagaagaacactgtgccttgtaccatcgaggacaagggcaacagcagctaccgctgc
acctacaagcccacccaggagggccagcacaccatcttcatcaccttcgctggcggccag
atcagcaagagtcccttcacagtcgacgtgggagaagcatgcaaccccagcctgtgcaga
gcgaaaggtcgcggcctgcagccaaagggcctgagggtgaaggagacggcagactttaag
gtttacaccaaaggagccggcaccggggagctgaaagtcaccatcaagggccccaaggga
attgaggagccatgcaaaaggaaagaccttggagactgcgtgtacgggtttgagtattac
cccaccactcctggaacttacagcatcaccatcacctggggaggacagcacattccccgc
agtcccattgaggttaagattggttctgaggccggtcagcagctagtgagagcctggggc
cccgggctggagggagggattgttggtaaatctgcagactttgtggtggaggctgttggc
cagaacgccggtaccctgggtttctctgtggaaggtccatcgcaggccaagattgaatgt
gacgataagggcgatggctcatgtgacgtgcgctactggcccacagagccaggcgagtat
gccgtccatgtgctgtgcaacaacgaggacatccagcactcgcccttcatggctgagatt
gtcaacgctctggggaaagacttctaccccgacaaagttaaggcgtatggtcctggcctc
cagagcagtggtctggctgttggaaagcccacagagttcacagtggacaccaaacaagga
ggaagcgctcctctcaagattgttgctcaggatggagagggcaaccctgtggatgtccag
gttaaagacaacggtaacggcacatacacctgtacttacacaccccggaaaccagtgaag
cacactgtcatggtgtcctgggggggtgtcaacatccccgagagtccattcaggatgaat
attggtgctggctgtcacccgaacaaggtgaaggtctctggacctggcgtagcaaagacc
ggcctgaaggcctttgaaccgacatactttactgttgactgctcagaggctggtcaaggt
gacatcagcataggaattaagtgtgctcccggtgtggtgggaccagcggaggcagacata
gactttgacatcatcaggaacgacaacgacacattcactgttaaatacactcctcctgga
gccggcagctacaccatcatggtgctgtttgctgaacacgccattcccatgtcaccgatt
agagtgaaggtggatccgtctcatgatgccagcaaagttaaggcggagggaccaggactc
agccgcagcggagttgaactgaacaaacccactcacttcactgtgaacaccaagggagct
ggaaaggccagcctggactgcagcttcagtgggccgaccaaagcagaggccgttaaggac
tttgaagtcataaacaaccatgacaacacacacactgtcaaatacactcctgtgcagcag
ggtcctctgggagttgctgtgacttacggtggagatcatattcccaagagtcccttcaat
gttgctgtggctccgactctggacctgagcaaggtcaacgtcactggactaggagacaaa
atgaccgtcggcaaagaccaggaggtgactgtcaaatcgaagggtgctggcggtcagggc
aaagttgccgccaaggttaccgggccttcaggaaaaccggtcacttgtaaggttgagcca
gggttgagcccagagaccagtcaggtgaagttcatccctcgtgaggcagggccataccag
gtggaactgacctacgacggagtgcccatccctggatcaccctacactcctacagcctac
cctcctactgacccgtccaaggtgcgctgctctggcccaggactggagcgggccaaggtc
ggggagaccggagagtttgtagtggactgcaccaatgctggtccggctgagctcaccatc
gagatcatctcggacagcggcacagaggccgaggttcacatccaggacaacggagatgga
acctacaccatcacttacatcccactctacccgggctcctacacgctcaccatacgctac
ggaggccaggatgtgccaaacttccccgcccgccttaccgtggagccggccatcgatgcc
agtggagtccgtgtgtttggaccaggagtggaaggcaaaggagtattccgtgacgcgacc
acagacttcaccgtggatgctcgtgctctcacacagaacggaggcgaccacatcaaaact
cggatcagcagtccatccggcagctgcccggatgccgtgatcacagaccacggcgatggc
atgtacgccgtggagtacactccctacgaggagggccctcacagtgtggaggtctgctac
gatggctctccagtgcccaaaagtccattccgtgtggcggtcaccgagggctgcgatccg
gctcgtgtccgtgttcacggtcctggcctgaagagcggcatcaccaacaagccgaacaag
ttcatggttgaaacccgaggagcgggaactggaggtcttggtctggcaatggaaggtcca
tcagaggccaaaatgtcctgcactgacaacaaagatggcagctgcagtgtggagtacatt
ccctatgagcctggaacatacaacctcaacatcacctatggagggcagccagtcaaagga
agccccttctccgttccagtcagcgacaccgtggacagcactaaggtgaagtgtcagggt
cctggcctcagcagcaacgtcagagccaacatccctcaggagttcacagtggacgcctcc
aaagctggagtggcccctctgcaggtccgcgttcaaggacccaaaggagtcgtggagcct
gtcgaggtggtggataatggagaccagactcacaccgtcaactatgttcccaccagagag
ggaccctactccatcaatgtcttgtatgctgatgaggaaatcccacgcagcccttacaag
gtgaaggtcctgccgacccacgacgccagcaaggtgcgtgccagcggacccggcctcaac
accaccggcgtgcccgcctctctgcctgtcgagttcaccattgatgccaaagatgcgggc
gagggactgctggcggtgcagatcacggacccagaggggaagcctaaaaaggcaaagatc
cgtgacaaccatgatgggacctacctggtgtcgtatgtaccagacatgacgggcagatac
accatcctaatcaaatacggaggggatgagattccttattcaccgtaccgcatcagagct
ctccccaccggagacgccagcaagtgcaccgtcacagtctcaatcggcggtcacggttta
ggcgctggtgttggtccaactattcagatcggtgaacagacagtcattacagttgatgcc
aaggctgctgggaaaggcaaggtgacgtgcagcgtgtgcacgcccgaaggggcggagctc
gacgtggacgtcgtcgaaaatgaggacggcacctttgacatcttctacactgcaccccaa
cccggagagtatgtaatatgtgtccgtttcggaggggagcacattcccaacagtccgttc
caagttacggctctggaaggaccatcagaccagctcatgcagcagagacaaatgccccaa
tactacgctcaacagccctgggcaacagacagaccagttgggatgaatggcctggatgtg
acaggacttagaccttttgacctggtcatcccattcaccattcagaagggagagatcaca
ggtgaagtccgaatgccatcaggcaaggtggccaagcccgacatcaccgacaacaaggat
ggcaccgtaaccgtgaagtacggtcccacagaggccggtctgcatgagatggatattaaa
tatgatggcatccacatcccaggaagccccctgcagttctttgtggactacatgaacagc
gggaatgtcagtgcctacggccctggtcttatccatggaaccgtgaacaagcctgccgtc
ttcactgttgacactaaagacgctggagagggtggcctttctctggccatcgaggggcca
tccaaagcagacatcagctgcatggacaaccaggacgggacctgcacagtgtcctacctc
cctgtcctgccaggggactacagcatcctggtcaaatataacgacaagcacatccctgga
agccccttctctgccagaatcactggggacgactccatgcggatgtcccacctgaaggtg
gggtcggctgctgacatccctctggacatcggcgagctggacatcagccagctgaccgcc
tccctcaccacgccctcgggtcgcgaggaaccctgcctgctgaagatcttgaggaacggc
cacgtcggcgtctcgttcgtgccgaaagagattggcgagcacctggtgaacatcaagaag
aacggacgccacatcgccaacagccccatctctgtgatgatcagccaatcggagatcggc
gacgccagccgtgtgcgtgtgagcgggcagggcctgagcgaagcaaggaccttcgagcca
gcagagttcatcatcgacactcgcgatgcgggatacggtggcttgagcctttccattgag
ggacccagcaaagtggacatcaacaccgaggatcaagaggatggcacctgcaaggtcacc
tactgccccacagaaccaggaaattacatcatcaacatcaaatttgctgaccaacatgtg
ccagggagcgccttcacggtgaaggtgactggggagggcaggatgaaggagagcatcacc
aggaagaagagagccgcttctgtcgccaacgtgggcagccagtgtgacctcagcctcaag
atcccagaaatcagcatagcggacatgacggcccaggtgaccagcccctcaggtcaggtc
cacaaagccgacatcatggagggagagaacaacacctactgcatccgctttgtccccacc
gagacgggcgtgcacacggtctgcgtcaagtacaacggcatgcacgtgcccggcagcccc
ttccaatttaccgtcgggcccctgggtgaaggcggagcccacaaagttcgcgccgggggg
ccgggcttggagagggccgaggctggagtaccagccgagttcagcatctggaccagagag
gccggggccgggggcctcagcatcgctgtggaggggccgagcaaggcagagatcaccttc
gaggaccgcaaggacggctccagtggagtgtcttacattgttcaggagccgggcgactat
gaggtgtcgatccgtttcaacgacgagcacatccccgacagccccttcatcgtccccgtg
gcctcgccgtcggacgacgcccgccgcctcactgttgccagtcttcaggagtcagggttg
aaggtaaaccagccggcatcgtttgccgtcagcctcaacggcgccaaaggtgtgatcgac
gcaaaggtccacagtccctccggcgcgctggagcagtgctgcgtcacggagatcgatcaa
gacaaatacgcagtccggttcatccccagagagaacggcctctatctgatcgacgtcaag
tttaatggaagtcacattccaggaagtccgtttaaaatccgcgtcggggagacgggccag
gctggcgacccgggcatggtgtccgcctacggaccgggactggagggaggcaccacagga
actgcgtgcgagtttgtggtaaacacaagcactgcaggccccggggccctcgccgtgacc
atcgacgggccctccaaagtgaagatggattgtgtggagtgtccagagggttacaaggtt
acttacaccccaatggcccctggaaactatctcatctccatcaaatatggcggcccttac
cacattgtgggaagcccctttaaggcaaagattacaggttccaagcttgtgtccagccac
agcatgcatgaaacctcctcggtcatggtcgaccccgtgacccgcgccatcagcggctct
cagcaggccactcccactcattcagatgccagcaaggtgacgactaagggccccggcctg
accaaggcgttcgttggccagaagaacaacttctgtgtcgactgcagcaaagcaggtcgt
aacatgctgttggtcggtgtggacggtccgaaggtcccctgcgaggagatcctggtgaag
cacatgggcaaccgtgtgtacaacgtcagctaccagctcaaagagaagggcgagtacatc
ctggtggtgaagtggggcgacgagcacatccccggcagtccctaccacctcaccgtctaa
DBGET
integrated database retrieval system
