Xiphophorus couchianus (Monterrey platyfish): 114141827
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Entry
114141827 CDS
T05908
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114141827 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114141827 (washc5)
Membrane trafficking [BR:
xco04131
]
Protein recycling
Others
WASH complex
114141827 (washc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
RSF
DUF3106
Motif
Other DBs
NCBI-GeneID:
114141827
NCBI-ProteinID:
XP_027868477
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All DBs
Position
3:23436362..23450939
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AA seq
1159 aa
AA seq
DB search
MVDFLADNNLCGQAILRIVSRGNAIIAELLRLSDFIPAVFRMKDKSDQQKYGDIICDFSY
FKGPEYYEGKLEAKPDLQDLDEEFRENNIEILSRFYLAFESVHKYIVDLNRYLDDLHEGI
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGDVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSAQPGAKRPGNYPDSYFQRVPISSTFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVCLFFSPSILHTQQAKMREIVDKYFPDNWVISIYMGITVNL
VEAWEPYKAAKTALNYTLDSANVKEQGSRYAASMESLRPQVQQLLKEGFLREELILDNIP
KLLNCLRDCNVAIRWLMLHSAESAYDLNNKRLRQIKDQVLNDSKYNPRILFQLLLDTAQF
EFTLKEMFKQMLSEKQIKWESYKKEGAERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQIIDSFTSIMQESIRVNPSMVTKLRATFLKLASALDLPLLRI
NQANSADLLSVSQFYSGELVAYVRKVLQIIPESMFTSLAKIIKLQIHNIMEVPTRLDKDK
LKDYSQLGARYEVAKLTHDISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAY
ALHKGLTFSPKAKPSELMPKLKDMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNSFLRTKIQDWQSVYQSTHIPIPKFPSVDESATFIGRLCREILRITDPKVTCYI
DRLNTWYDLKSHQEVTNNRLFSEIQSTLGTFGLNGLDRLLCFMIVRELQNFLTMLQKTIL
KDKAVVDVFKTVLAAVSPVQGIVANASKLYASAVAKSQKIWGAYLESIMKVGQMQILRQQ
IANELNYSCKFDSKHLAAALENLNKSLLADIEAHYQDPTLPYPKEENTLLYEITAYLEAA
GIHNPLNKIYITTKRLPYFPIINFLFVVAQLPKLQYNKNQGMSCRKATDPVDWPPLVLGM
LTLLKQFHSRYTQQFLALIGQFIRSIMEQCTSQKIPDMPSDVVGALMFLEDYVKYTKLSR
KVVEAHVPSFIFDEFRTVL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggacttcctagcagacaataacctgtgtggccaggcaattctccggatagtctcc
agaggaaacgccattattgcagagctcctgcgtctttctgacttcatccccgcagtgttt
aggatgaaagacaaaagtgatcagcaaaaatatggagacattatctgtgacttcagctac
ttcaagggacctgagtattatgaggggaagctggaggccaaaccggacctacaggaccta
gatgaagagttcagagagaataacatcgagattctgtcgaggttctatttggcttttgag
agtgtccacaaatacatagtggatctcaacagatacttggatgacctccatgagggcatt
tacatccagcagactttggaaactgtgctcctaaatgaggatgggaaacagctcctttgc
gaggctctctacctgtacggagtcatgttgctggttatcgaccagaaaattgaaggagat
gtccgggagaggatgctcgtctcctattacagatacagtgccgcccgctcctctgccgac
tccaatttggacgacatctgcaagctcctgcgcagcaccggctactccgcccagcctgga
gccaaacggccgggcaactacccggacagctacttccagagggttcccatcagcagcact
ttcattagcatggttattgggaggctgcgctcagatgacatctacaaccaagtgtccgcc
tatcctctaccggagcatcgcagcacggcgctggccaaccaggctgccatgctttacgtc
tgcctgttcttcagcccctccatactgcacacccagcaggccaagatgagggagatagta
gataagtacttccctgacaactgggtcatcagtatctacatggggatcacggtgaacctg
gtggaggcctgggaaccgtacaaagctgccaagacggctctgaactacaccctggactcg
gcgaacgtcaaagagcagggctcccgctatgcagccagtatggagagcctgaggccgcag
gtgcagcagctcttaaaggaaggtttcctcagagaggagctcatcttggacaacattccc
aaactactgaactgtctgagagactgcaacgttgccatccgctggctgatgctgcactct
gcagagtcggcctatgatttgaacaacaagcggctgcgtcagatcaaagatcaagtgctc
aacgactccaagtacaaccccaggatcctgtttcagctcctgctcgacactgctcagttt
gagttcacactcaaagagatgttcaagcagatgctatcagagaagcagatcaaatgggag
agctacaagaaagagggagctgagagaatgaccgaactggccgaagtcttctccggggtc
aagcctctcaccagggtggagaagaacgagaatttacaagcgtggttcagggaaatctca
aagcagatcgagtctttgaactatgaggactccacagctgctgggaggaagacggtgcag
ctgatccaggctcttgttgaggtccaggagtttcaccagctggagtccaacttgcaggtg
tgtcagtttttggccgacaccaggaagttcctgcaccaaatgatccgcaccatcaacatc
aaggaggaggttctgatcaccatgcagatagttggagatctttcctatgcgtggcagata
attgacagctttacatctattatgcaggagagcatcagagtcaacccatccatggtcaca
aagctcagagccacatttctgaagctggcttctgcgttggatctgccgttgctgcgcatc
aaccaggccaacagcgccgacctgctgagtgtctcccagttctactctggagagttggtg
gcttacgttagaaaggtgcttcagattatcccagagagcatgttcacctctctggccaaa
atcatcaaacttcagatccacaatatcatggaagtgcccacgcggctggataaagacaag
ctgaaggactactcccaactaggagcccgttacgaagtggcaaaactcacccatgacatc
tctatcttcactgaaggcatcttgatgatgaagaccaccttagtgggaatcattaaagtg
gatcccaagcagcttttggaagatggcatcaggaaggagctggtgaagagggtggcgtat
gcgttgcacaaaggcttaaccttcagccccaaggctaagcccagcgaactgatgccgaaa
ttgaaggacatggcggccaccatggatggcttctacaggtcctttgagtacatccaggac
tacgtcagcatttatggccttaaaatctggcaagaggaagtttctcgcatcatcaactac
aatgtggagcaggaatgcaacagtttcctcaggactaagatccaggactggcagagtgtc
tatcagtccacacacatccccattccaaaattcccgtctgtggatgagtcagccaccttc
atcggtcgtctctgtagagagatcctacgaatcaccgatccaaaggtgacatgttacatc
gaccggctgaacacctggtacgacttgaagagccaccaggaagtgaccaacaacaggttg
ttctctgaaatccagagcaccctgggcacatttggtcttaacggactcgaccgactgctc
tgcttcatgatcgtcagggaacttcagaacttcctgacaatgctccagaaaaccattctt
aaggacaaagcagtggtggatgttttcaaaactgtgctagctgctgtcagcccagtacaa
ggcattgtggctaatgccagcaaactctatgcaagtgctgtggccaaatcacaaaagatc
tggggtgcatatctggaatccatcatgaaggtcggccagatgcagattctccggcagcag
attgcaaatgagctgaactactcctgcaagtttgactccaagcacctggcagctgctctg
gaaaatctcaacaagtctctgctagcagacattgaggcccactaccaagacccaaccctg
ccctatcctaaagaagagaacactcttctgtacgagatcactgcctacctggaggccgct
ggcattcataacccactcaataagatatacatcacaacaaagcgtcttccgtacttcccc
atcatcaacttcctctttgttgtggctcagctgcctaagcttcagtacaacaagaaccag
ggaatgagctgcaggaaagctacagacccagttgactggccaccactagtactcgggatg
ctcacgctcctcaagcagttccactccagatacacgcagcagttcctggctctcatcggt
cagttcatccgatctatcatggagcagtgcacaagtcagaaaatcccagacatgccttca
gatgtggtgggagcgctgatgttcctcgaagactatgtgaagtacacgaaactctcacgc
aaggtggtcgaagctcacgtgcccagttttatttttgatgagttcagaacagtactgtga
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