Xiphophorus couchianus (Monterrey platyfish): 114141849
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Entry
114141849 CDS
T05908
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04510
Focal adhesion
xco04512
ECM-receptor interaction
xco04810
Regulation of actin cytoskeleton
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114141849 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114141849 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114141849 (itga10)
04810 Regulation of actin cytoskeleton
114141849 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114141849 (itga10)
Cell adhesion molecules [BR:
xco04515
]
Integrins
Integrin alpha subunits
114141849 (itga10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
FG-GAP_2
Integrin_A_Ig_3
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
114141849
NCBI-ProteinID:
XP_027868514
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Position
3:14600062..14635908
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AA seq
1168 aa
AA seq
DB search
MELRKNLLCLEFILLLKGLCQCFNIDVKHPRVFTGPEDAQFGFSVLQHEADGEKSMLVGA
PWDGPPNNRKGDVYKCVVGEEKNSNCSKVNLGETALRNVSKNLRNSHLGMTLTPDSPDGF
LACAPLWSQECGTSMFSTGICASVGDDLEPRGTIAPTEQKCQTFMDIVIVVDGSNSIYPW
YEVQNFLSNILSKFHISSDQMQVGILQYAEVAVHEWSLKDYQTTQEVVEAAKNISRQEGR
ETRTAYAIQMACTEAFSAERGAREGATKVMIVVTDGESHDGDELPDALEECESRNITRYA
IAVLGYYIRKQQDPETFINEIKYIASDPDDEYFFNVTDEAALNDIVDALGDRIFTLEGTL
GYNQSTFHMEMSQIGFSTHTLDDGILFGIVGAYDWDGGVLKEGTNGVIIPPREAFESEFP
LELKNHAAYLGYTVSSVVVGDWRRLYVAGAPRFKHKGKVVLFELHENGYVDIVQALNGEQ
IGSYYGSELCGLDIDKDGITDVLLVAAPMYLGSGNKEAGKVYIYTLNGEGKFISNGTLKS
DNKSQDARFGYALAAAPDLNHDGFTDLVVGAPLEDEHRGAIYVYHGYDIYIIHDCKQHIL
GSSLSPSLQYFGRSVSARLDLDGDELIDLAVGAQGRAVLLSSRSIVQINVSLSFQPHSIN
VIQKTCQRGGRESACLNATACFTAVSRSPGSHSNAFDLWVSAMLDDRKFSARALFDESSH
RQMQLPVRVQTRKTLCYKLPFHVYDTADYIRPISFSLRFKINDTETGPVLDEGWPTSVKK
FIPFFKDCGEDDVCTTDLVLQAHLDISGTRQKPYVIRSPRRRLSVEVQLQNRLENAYNTS
LKLHYSRNLHFSSISIKENANFKIECTALGSNSHSCNVSYPVFRSHSKVNFMLEFEFSCT
SLHNRLQMKLNATSDSSEREGTLGDNSVQLQTFVQYEPDLFVSSESNLNRYEVHPTRTAS
EAMGPEFYTYIRLLNIGCYSVSNLELRVLLPSVAAEDAAFMTVTDVFTYNATGMKCGVLS
DVTQLKSRQKDIRPLHPEDMMHDEILNCSRSWCTEVVCEVRQLGQQAVIRISRRVHDDFF
RKVKYKSVRIISAYSLSAQENNLITLGAGTVQGETVLEVLKGQAIPISLWILIGSIIGGL
LLLALIIFILWKLGFFARKHREDENHED
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgtaaaaacctgttgtgcctggagtttattctccttctgaaagggttgtgt
cagtgtttcaacatagatgtgaaacatcctcgcgtcttcaccggcccagaggacgcccaa
tttggcttctcggtcctacagcatgaagcagatggagagaaatcgatgctggttggagcc
ccgtgggatgggccgcccaacaacaggaaaggagacgtgtataaatgtgttgttggggag
gagaaaaactcaaactgtagtaaagtaaaccttggtgaaactgctctacgtaatgtttct
aaaaatctgaggaactctcacctgggaatgaccctcacaccagactcacctgatggattt
ttggcgtgtgcccctctgtggtcgcaggagtgtgggacgtcgatgttcagcactggcatc
tgcgcctctgttggcgatgacctggaaccgagaggcaccatcgctccaacagagcaaaag
tgtcagaccttcatggacatcgtgatcgttgtggacggctcaaacagcatctatccctgg
tatgaagtccagaacttcctcagcaacattctcagcaagttccacatcagctcggaccag
atgcaggttggtatactgcagtatgcagaggtagcagtccatgagtggtctctgaaagac
taccagaccacacaggaggtggtggaggccgccaagaacatcagccgacaggagggacga
gagacacgcactgcatatgccatccaaatggcctgcacagaggcgttcagcgctgagcgt
ggagccagggaaggcgccaccaaggtgatgattgtggtcacagacggggagtcgcacgac
ggggacgagctgccagacgctctggaggaatgcgaaagcagaaacatcaccagatacgcc
atcgctgttctggggtattatatccgcaaacagcaggatccagagaccttcattaatgag
atcaaatacatcgccagcgacccagatgacgagtactttttcaacgtgaccgatgaagct
gcgctgaatgacattgtggacgctctcggagatcggattttcactcttgaaggtaccttg
ggctacaatcaaagcacgttccacatggagatgtctcagatcggtttctcaacgcacaca
ctggatgatggcattctgtttgggattgtgggcgcctacgactgggatggaggggtcctg
aaggaagggaccaacggagtaattatcccccccagagaagcctttgaaagtgaatttcca
ttggagctcaaaaatcatgctgcttatttagggtacactgtgtcatctgtggttgttggt
gactggaggaggctgtacgtggctggggctcctcgatttaaacacaaaggcaaagtcgtt
ttatttgaactccatgaaaacggctatgtcgacatcgtgcaggctttgaatggagaacag
attggatcttactatggcagtgaactgtgcgggctggatattgataaagatggcatcact
gacgtccttttggtcgctgctcccatgtatcttggctcaggaaacaaggaagctggaaaa
gtctacatctacactctcaatggggagggaaaatttatatctaatgggactctgaaatcc
gacaataagtctcaggatgccaggtttggttatgcactggcggctgctcccgatctgaac
catgatggcttcactgacctggtggtgggagcgccgctggaggatgagcacagaggggcc
atctatgtctaccatggatacgatatttacatcatccatgactgcaaacagcatatatta
gggtcgtccctctccccctctctgcagtattttggccgcagtgtaagtgcacggttggac
ttggacggtgatgagctgatagatttggcagtgggagctcagggcagagccgtgctgctc
agctccagaagcatcgtccagatcaatgtgagtttgtccttccagccgcactccattaac
gtcattcagaagacgtgtcagaggggcggcagagagtcagcatgcctcaacgccacagcc
tgcttcacggccgtttcacgctcacctggatcacacagcaatgcttttgatctttgggtg
tcagccatgttggatgacaggaagttttcagcgcgagctctgttcgatgaaagctcccac
agacagatgcagcttccagtgcgagtgcaaacaagaaaaactctctgctacaagctgcct
ttccatgtatacgatacagcagattatattcgcccaatcagcttctcactgcggtttaag
atcaacgacacagagacgggtccggtgttggatgaaggctggcctacaagcgtcaagaaa
tttataccatttttcaaagactgtggcgaagatgacgtttgcacaacagacctggtcttg
caggcacacctggacatctctggtacaaggcagaaaccttatgtgattcgcagccctcgt
aggcgtctgtcggtggaagtgcagctccagaacaggctggaaaatgcctacaacactagc
ctgaagctgcactactcacgcaacctccacttctccagcatcagcatcaaagagaatgcc
aacttcaagatagagtgtaccgctctaggctcaaacagccactcgtgtaacgtcagctac
ccagtgtttcgctcgcattcaaaggtgaattttatgttggagtttgaattcagctgcacc
tctttgcacaatcggttacaaatgaagctcaatgctaccagtgacagcagtgagagagag
ggaactctgggggacaacagtgttcagctgcagactttcgtacaatatgagccagatctc
tttgttagcagtgagtctaacctgaaccgctacgaggtccatcccacacggacagcatca
gaagccatgggtccagagttctacacgtacatcaggctactgaatatcggctgttactct
gtgagtaatctggagctgcgtgtgcttttgccctctgtggcagcagaagacgcggccttc
atgactgtaacggatgtcttcacatacaacgccacaggaatgaagtgcggagtgctgagt
gatgtaacccagttgaagtccagacagaaagacattcgtccccttcatcccgaggacatg
atgcatgatgaaatactgaactgcagccggtcgtggtgcacagaggtcgtctgtgaggtg
cgacagctcggtcagcaggcggttattcgaatcagccgcagagttcatgatgactttttc
agaaaagtcaaatataagtccgtgaggataattagcgcctacagtctctcagctcaggag
aataacctcatcactctgggagcaggaacagtccagggggagactgtcctagaggtgctg
aagggccaagctattcccatctccctctggattttgatcggcagcatcataggcggtttg
ctgctattagcactgattatattcatactgtggaagcttggattcttcgcacggaaacat
agagaggatgaaaaccacgaggactga
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integrated database retrieval system
