Xiphophorus couchianus (Monterrey platyfish): 114141856
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Entry
114141856 CDS
T05908
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D-like
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04020
Calcium signaling pathway
xco04080
Neuroactive ligand-receptor interaction
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
114141856
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114141856
04082 Neuroactive ligand signaling
114141856
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114141856
Ion channels [BR:
xco04040
]
Ligand-gated channels
Glutamate (ionotropic)
114141856
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
114141856
NCBI-ProteinID:
XP_027868528
LinkDB
All DBs
Position
3:complement(13524803..13611419)
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AA seq
1956 aa
AA seq
DB search
MVAIPTLSLLLVLAEWAGLVDASPHLLLRPSPRERDAGAVMNFNIAVIHAGATVQAEAAV
AGPGGRVLYPGFGRVYGSLGESVVTQWGSANVIWLQVNDSSPKTVLSQLCELLAARPLQG
LVYEEERPPPTAWGPLAPMLEFVSAQTGLPIVAVGGGAGLGRMPQESGSIFLQFSSSTAL
QLEVIFEVLEEYDWTAFSVVSTRHHGYQDFLSVVEGLTDGSFIGWEKKSVVILNVTDDPG
GARTRRLLKENEAQVRLLYCSQEEAELVFRAAWAAGQAGASHMWFAVGPALSGLGMESLP
RALFAVRPQGWRDEPRRRIARGVSVLTHGAVAMRKEYGSTGGPNFVTTCMTDANQTQRLR
SRMRYFSNITLGGRDYSFNSDGYLANPFLDVISWTPGRGWEDVGWWENGVLRLRYPAWSR
YGPFLKPPDDAQHLRVVTLEERPFVIVELADPSSGTCIRDSVPCRRPLNASAIHEGVVPL
KQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWNGMIGEVVYKRADMAIGSL
TINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVT
VFIFEFFSPVGYNRSLHSGKKAGGSTFTIGKSVWLLWAIVFNNSVPVENPRGTTSKIMVL
IWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPEEQYPPLKFGTVPNGSTEK
NIRSNYPDMHQYMGKYNQRGVEDAILNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGS
GKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEVMSSKL
DIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCMATSSGKLDFLLAISRGMYSCCSF
EDETAPGGSKSLPSHHHTAMVTVPSQPHVVSTTVTNPAIAMAQQQQQPQQQQPPPVYKTP
LPGSPPTVVHSGSALGSSNPPIAGAPLPCSTFLPRPDRRLAVVDRWRLPKTATATNPMAV
RGGITDMGPFAQKVPQNWATAAGGGGGLDGYKRYYGPIDPEGLGSCMDQQAGSQTPKTMP
RGHPQPPPASVAFYSEKSMDHGVGKKVVGGGGGGQGKGPVKPLGTPRLPPKSQAPLPPTP
PLPHPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGRRGGARDGMREGGGRRTRPLSPP
LSLPIPVPLSPSYTPPSPSASLHYMSSSSTSTTSSTSTSSSASSSRSTSPTYSYSSSRST
RDRTGGIDGEDDDDDEDLTEESSLLLGRGRERERSIIRPRSLSHGRLPPPIPPRKPRTSW
GDRERERERERGGSQLSQLQEWWASWSERERRGTGGETERLKREKKRRKEKEKEKKKKKK
NKKRKKREERERERERERKRRKEKKKKKKALKTKKRKKSTGGKRSEPEEGDVEQEREGEA
ERERDEGIQDYSSFSAQYGSTFGEKGRDSWEGDRERGRGEDGNDRDEEDSGRSRERRPKS
SHSHRRRTPNKRYSNSNKFPTSVKFWMNGRGDNSNTTPVSLHPLLPSSKRRKSGGIDRED
SGRVGERRPLLMHYEKEKAQTREGLSFHEWDSDDNDDDDEDDDEEEERDRVRERGEDRGR
RVGRGAVSESERDRGRVEDSYSDEGSSGEFGRFERYWEESAGGTGTGIGGIGGGGWFFGT
YPSREKGGSINSRDDSLLGTRAEGWIGADFWGSGPGIGWASGGGSGGLGSQWPPPPTAFP
PPRRYWSMDKIPVKGEKKWKGGGEKRKGRSRERLDEGGRSTLCSCSLFPQPHPYPHPHGR
SQTSNSKRRASALSHSQEELLPHCHSFSGGSRPKPLPPKPDSSQAKSDSQSNLSLNTQPT
DHQPQPSPSPPQQPSLSPTSLPMPIVPPSSSASVSPPAGVGMAGPAQASASAKLQYQRLR
SVPQPRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccatacctactctctctctcctattggtcctggcagagtgggcaggtctggtg
gacgcatccccccacctcctgctccggccgagcccgcgggaacgtgatgcaggggccgtg
atgaacttcaacattgccgtgatccacgccggtgccacggtgcaggcggaggcagcggtg
gcggggccggggggaagggtgctctaccccggcttcggacgggtatacggctccctgggg
gagagcgtggtcacccagtggggctctgctaacgtcatctggcttcaggtgaatgacagc
agccctaagacggtgctgtcccagctgtgtgagttgttagcggcgaggcccctgcagggt
ctggtttacgaagaggagaggccccctccgacggcttggggtcccttggcccccatgctg
gagtttgtctctgcacaaacaggactgcctatagtggctgtaggcgggggagcagggctg
gggaggatgccacaggaatcaggttccatctttctccagttcagctcttccactgcgctc
cagttagaggtcatcttcgaggtgctggaggagtacgactggaccgccttttctgtggtg
tccacgcgtcaccatggctaccaggacttcctttccgtagtggagggactgacggacggc
tcgttcatcggatgggagaagaagagtgttgttatcctgaacgtgaccgacgatcctggg
ggtgcacgcacgcgtaggctgctgaaggagaacgaggcgcaggtccgcctgctgtactgc
tctcaggaggaggctgagctggtcttccgtgccgcctgggccgctggtcaggccggggcc
tcgcacatgtggttcgcggtgggccccgctctctcgggtctgggcatggagagcttgcct
cgggcgctattcgccgttcggccccagggttggagggacgagcctcgccgaaggatcgct
cggggtgtgtctgtgctcactcacggagcggtggcaatgcgcaaagaatatggaagcacg
ggcgggccaaactttgtcaccacatgcatgacagatgccaatcagacccagaggctgcga
agcaggatgaggtatttcagcaacataacgcttggtggtcgagactattccttcaatagc
gacggttacctggccaaccctttcttggacgtcatctcttggacacctggaagaggctgg
gaagatgtaggctggtgggagaacggcgtgctgagacttcgatacccagcttggtcccgc
tacgggcccttcctgaagccgcctgacgatgcccagcacctgcgggttgtaacactggag
gaaaggccatttgtcattgtagagcttgcagacccttcttcaggaacctgcatccgggac
tctgttccctgcagacgtcctctcaatgccagtgcgatccatgagggtgtggttcctctg
aagcagtgctgcaagggtttctgcattgacatcctcaagcgacttgcaaagattgtcggc
ttcacctacgacctctacttggtgaccaatgggaagcatgggaagaaaattgatggcgtt
tggaacggcatgattggagaggtggtgtacaagcgggcggacatggccattggctcgctg
actatcaatgaggagaggtccgaggtcgtggatttttctgtaccattcgtggagacaggg
atcagtgtcatggtctcccgtagcaatggcactgtttcaccatcagcttttttagagcct
tatagtccagcagtgtgggtgatgatgttcgtcatgtgcctcactgttgtagctgtgacc
gtctttatttttgaattcttcagccctgtgggctacaaccgcagtctgcattcaggaaag
aaggcaggagggtccactttcaccatcggaaaatctgtctggcttttatgggccattgtc
ttcaacaattctgtgccggtggagaacccgagaggaaccacgagcaagatcatggtgctg
atctgggccttctttgctgtcatctttctggcctcttacactgctaacctggctgccttc
atgatccaggaagagtacatcgacacagtttcaggcctctcggacaagaagtttcagcat
ccagaggagcagtacccacctctcaagtttggcacggtgcccaatgggagcacagaaaaa
aacattcgctccaactatccagacatgcaccagtacatgggcaaatacaaccagagagga
gtggaggacgccatcctgaacctaaagactgggaagctggatgcttttatttatgatgct
gcagtgttaaactatatggccaggaaggacgaaggttgtaaggtgatgaccataggctcg
gggaaggtttttgccaccacaggctacggtatcgccctgcacaaaaactcacgttggaaa
cgtcctcttgacctggccctgctgcagctagtgggagatgatgagattgaaatgctggag
cgcctctggctgtcaggtatctgccataatgacaaaattgaggtgatgagcagtaaactg
gacattgacaacatggctggggtcttctatatgcttctggtggctatgggcctcagtctg
ctggtgtttgcatgggaacatttagtctactggaaactgcgccactgtatggccactagt
tctgggaagttggactttctcttggcaattagcagaggcatgtacagctgctgcagtttt
gaggatgaaacagcaccaggtggatctaaatctttgccttcacaccaccacacagcaatg
gtgactgttccatcacagccacatgtagtttctacaactgtgaccaacccagcaattgca
atggcgcaacagcagcaacaaccacaacagcagcaaccaccgcctgtctacaaaacacct
ctaccaggctctcctcccactgtggtacattctgggtcagctctgggttcttctaacccc
cccattgctggtgcccccctcccttgctccacttttctgcctagaccagatcgaaggttg
gcagtagtggatcgctggaggttgcctaaaactgctacagccaccaaccccatggctgta
agagggggcatcactgacatggggccgtttgctcagaaagttccacaaaactgggctaca
gctgctggagggggtgggggactcgatggctataagagatattatggtcccattgaccct
gagggactgggatcctgcatggatcagcaagcagggtcccagacccccaagactatgcca
aggggccacccccagccccctccagcgagtgtggccttctattcagagaagagcatggat
cacggggtggggaagaaggtggtgggaggtggcggtggaggtcaggggaaagggcctgtt
aaacctctgggcacccccaggctgcctcctaagagtcaggcccctctacctcctacacct
ccactgccacatccctctccccctctcccttcatccttctggagaaagcggaggcccaag
aagcccaaagagcctgggggaccactttatgagaacattctgcctctggggcgaagggga
ggagcaagagatggaatgagggaaggaggaggaaggaggacccgcccgctttctcctcca
ctttcacttcctataccagttccactgagcccctcctatactcctccttctccttctgca
tctttgcactatatgtcctcatcctccacgtcaaccacctcatcaacgtcaacgtcttca
tctgcctcatcttcccgctccacctctcccacctactcttacagctcctccaggagcaca
cgggacaggactggaggaattgatggagaggacgacgatgatgatgaagatctgacagaa
gagtcaagtcttctccttgggaggggaagagagagggagcgctctatcattcgaccacgt
tcccttagccacgggcgcttgccaccaccaattccccccaggaaaccacgcacatcttgg
ggtgacagagaaagagaacgagaaagggaaagaggcgggagccaactgtctcagcttcaa
gagtggtgggcaagctggagtgaaagggagaggagaggaacaggtggagaaactgaaagg
ctgaaaagggaaaagaagaggaggaaagaaaaggagaaagaaaagaagaaaaagaaaaag
aacaaaaagagaaaaaagagagaggagagagaaagagagcgggagagagaaagaaagcga
aggaaggagaaaaagaagaagaagaaggcattaaaaacaaagaaaaggaaaaagtctact
gggggaaaacgatctgagccggaagaaggagatgtagaacaagaaagggaaggagaagct
gagagagaaagagatgaagggatacaagactactcttctttttctgcccaatatgggagc
acatttggagagaaggggagagattcatgggaaggagacagagaaagaggtaggggggaa
gatggcaatgacagggatgaggaggacagtggaagaagtagggaaaggcgtcccaaatcc
tcacactctcatagacgtcgaacccccaataagcgctactctaactctaataagtttcct
acttctgttaaattttggatgaatggaagaggagataactccaataccactccagtatcc
cttcatccacttcttccatcatccaagcggcgaaaaagtggagggattgacagagaagat
agtggtagagttggtgaaagacgtcctttgttaatgcattatgaaaaagagaaagcacag
acaagagaagggctgtctttccatgaatgggactcagatgataatgatgacgatgatgaa
gatgatgatgaggaggaagagagagacagagtgagggagcggggagaggacaggggaagg
agggtaggtagaggggctgtctctgaatctgaaagggacagaggaagggtggaggacagc
tactcagatgagggttcttcaggagaatttggtcgttttgaaagatactgggaagaaagt
gcaggaggcactggcactgggattggtggcataggtggaggaggctggttctttggtacc
tatccctccagagagaaagggggaagtatcaatagtcgagatgattcgttactgggaact
cgagcagagggatggattggtgctgatttctggggatctgggccaggaataggatgggca
tctggtggagggagtggagggctgggctcacagtggccaccacccccaacagccttccct
ccacctagacgatactggtcaatggacaaaattcctgtgaagggagaaaaaaagtggaag
ggtggtggcgaaaagagaaaaggacgaagcagggaaagactggatgagggaggacgatca
actctgtgttcctgcagccttttcccacagccccatccttatccacatccccatggccgt
tcacaaacttctaattccaagagaagagcatcagcactttcccatagccaagaagagctt
cttccccactgccacagtttcagcgggggttctcgtcccaaacctttgcctcccaaacca
gattccagtcaagccaaatcagacagccaatctaacctcagcctcaacacacagccgaca
gaccatcagccacagccctcaccatcaccaccgcagcagccatccttgtcacccacttcg
ctccccatgcccatcgtacctccatcctcctcagcctctgtctcgccaccagcaggggta
gggatggcaggtccggctcaggcttcagccagtgccaaactccaatatcagagactgcgc
tctgtgcctcagccacggaggttctactctccccacctaccactcaaagccaagagcctg
tgctcacgtcgagggtcagcccacttttccagcctggagagtgaggtatga
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