Xiphophorus couchianus (Monterrey platyfish): 114141917
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Entry
114141917 CDS
T05908
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 4
KO
K21988
transmembrane channel-like protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114141917 (tmc4)
03037 Cilium and associated proteins [BR:
xco03037
]
114141917 (tmc4)
Transporters [BR:
xco02000
]
Other transporters
Pores ion channels [TC:
1
]
114141917 (tmc4)
Cilium and associated proteins [BR:
xco03037
]
Other cilia and associated proteins
Stereociliary proteins
114141917 (tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
114141917
NCBI-ProteinID:
XP_027868630
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All DBs
Position
3:13927988..13938056
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AA seq
698 aa
AA seq
DB search
MTIEQQRQGSAFSGSGHPTDQESLRFRRVSSRMSTQIYHEPNSSTSLAQEEEQSGSEPTL
ELRNTVFPMALKKAARQVQQMQVPAQFNGGSWKQKRIKFVRQFKSNVREFLYFFSLWGKT
LQKIGGNFGGGVQSYFIFLRFLVILNFVSFLLIAGFVLIPGIVFRSVGIKPESSKADVSS
ECLKYDPNPQGLVVFYEFFLDLLSGTGFMEYSYLFYGYYNNSVIVTSLVGSHFSYNIPLA
YLLTAVFYFAFCLICIIVRMGKAARVAVTTGGNDVRSYSMIVFTGWDYGCLGSKATKLKQ
RNIYYRLQVDLEEERLKKHAASLTLCNKVTLHSLRVLMFFVAVGLIVATFLAIARATTFS
QENSHVPGILGLFYTYLPSIVITLGNFLVPLLCDQIALLEKYPPSATVVVALLRAVVLRL
VSLGILLFTLWKQIMCHDSRDKCNLCHYNHEDYQCWETSVGQEMYKLTLFDLLVSIALLV
LVEFPRRMVVDHWSCKLTQWVGRQEFVVPSNVLGLVYGQTVVWTGALFCPLLPLINTVKF
VILFYCKKITLFYNCRPALRTFRSTTSAIFFLAVLLFGWILALVVMIYSVAVIHPSFACG
PFRSFFRMWKIVPESFSTLPEGARDFLFFIGSQAFSIPLFAISCVFMCYFIALASIYGKS
VAMLRAQLKLAGQDKQFLVKQIEKMKLLSPQHIEGEQD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgagcagcaaagacaaggctccgcattctcaggaagcggtcatcctactgac
caggagtcgctcaggtttcgccgggtttcttctcgaatgtccactcagatctaccatgaa
cccaacagcagcacaagcctggcacaggaggaggaacagagcggttctgagccgaccctg
gagctcaggaacacagttttccccatggctctgaaaaaagctgcacggcaagtgcaacaa
atgcaggttcctgctcagttcaatggaggatcctggaaacaaaaaaggatcaaatttgtg
cgtcaattcaaaagtaacgtcagagagtttctctacttcttctcactgtggggaaaaacc
ttgcaaaagattggaggaaactttggaggtggagtccaatcttacttcatcttccttcga
ttcttggtgattctcaattttgtgtcgttcctgctgattgctggattcgtcctcatcccc
ggcatcgtgttcagatcggtgggcatcaaaccggagagcagcaaagctgatgtttcatca
gaatgcttgaagtatgacccaaatcctcaaggcctggtggtcttttatgagttcttcctc
gatttactgtcaggaacaggtttcatggagtattcatacttgttttatggatactacaac
aacagtgttatagttacttccttggtgggcagccacttttcctacaacatccccctggcc
tatctgctcactgccgtcttctactttgccttttgtctcatttgcatcattgtacggatg
ggcaaagcggctcgagttgccgtgacaaccggaggcaacgatgtgaggagctacagcatg
atcgtcttcaccgggtgggactacggctgcctgggaagcaaagccaccaaactaaaacag
aggaacatttactaccggctgcaggtggatctggaggaggagcgtctaaagaagcatgca
gcgtccctcactttgtgcaacaaagttactttacactctctgcgtgttttgatgtttttt
gtcgcagtcgggctcatcgtagcgaccttccttgccattgctcgtgcgactacattcagc
caggaaaacagccatgtaccagggatcctgggattgttttatacgtatctgccgtccatc
gtcatcaccctaggaaacttcttggtgcctctgctgtgcgaccaaattgctttgctagaa
aaatatcctcccagtgctactgtggtagtggcactattaagggcagttgtcttgcgtctc
gtcagtctgggcatccttctcttcaccctctggaaacagatcatgtgccacgacagtaga
gacaagtgtaatctgtgtcactacaaccacgaagattaccagtgctgggaaacaagtgtg
ggacaggagatgtacaagctgacgctgtttgacctcctcgttagcattgctcttctcgtg
ctggttgaatttccacgcaggatggtggtggatcactggtcctgtaagttgacccagtgg
gtgggccggcaggagtttgtggttccctccaacgtcctgggccttgtttacggtcagact
gtggtgtggactggagctctcttttgccccctgctgcctctcatcaacacggtcaagttt
gttatcctcttctattgcaagaagatcacacttttctacaactgtcgtccagcgctgagg
acatttcggtccacgacctccgccatctttttcctggccgttctcctgttcggctggatc
ctcgccttggttgtcatgatttacagcgtagctgtgatccatccgtcatttgcttgcggg
cctttccgttccttctttaggatgtggaagattgttccagagtccttctccactcttcct
gaaggagcaagagattttctcttcttcattggctcacaagctttctccatacctctgttt
gctatatcgtgtgtgtttatgtgctacttcatcgctttagcctctatctatggaaaatct
gttgcaatgctgagagctcaacttaaattggcaggacaggataagcagttcttggtgaag
cagattgagaagatgaagcttctgtcaccacagcacatcgaaggagaacaagactaa
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