Xiphophorus couchianus (Monterrey platyfish): 114142025
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Entry
114142025 CDS
T05908
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16-like
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
xco04010
MAPK signaling pathway
xco04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
114142025
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114142025
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
114142025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
xco04050
]
114142025
04090 CD molecules [BR:
xco04090
]
114142025
Cytokine receptors [BR:
xco04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
114142025
CD molecules [BR:
xco04090
]
Proteins
114142025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TNFR_16_TM
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
114142025
NCBI-ProteinID:
XP_027868836
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All DBs
Position
3:complement(17095877..17109686)
Genome browser
AA seq
399 aa
AA seq
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MRLIVISAVLLLKVTLGKGCASGKYTESGHCCNLCPAGYALEETCGKENTKCLPCLPGTF
SPSEGLDSCLPCSTCPSGVPMLASCSATQDTQCECDVGFYFLRGLGLCAPCSRCRPGHGV
VRECGPQGDTLCQKCGPGTFSEEDFNIKPCQACSQCSDEEVEIQSCMHNFDTLCMDKKLH
IGPAGADGALNIPNGAVMEENEEEDGSPAPGPSKFTPQDEGGSNNILVYVSVLAAVVLGL
LVYVAYKCWRSCKQKKALSKARVAELAASPEGEKLQSDSGVFLDSYSLQDNQPSKGTKRD
SKLDNRLYVNLPPHKQEEVERLLQEASGRGWRHLGAALGYEPEQLDLFGRGEAPAHTLLS
NWAQREGSALGLLSSALNRIERPDVVTALNSTQQGVSVV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagattgattgtcatctctgcggttctgctgttgaaagttactcttggaaagggttgt
gctagtgggaagtacaccgagtcgggacattgttgcaatttgtgtccagctggttatgca
ttggaggaaacgtgtggaaaggaaaataccaaatgtctaccatgtctgccaggaacattt
tcaccatccgaaggcctcgactcttgccttccatgtagcacctgtccgtctggtgtgccc
atgctggcgtcctgttcggcaacccaggacacgcaatgcgagtgtgacgttggcttctac
tttctgagaggcttaggtctatgcgcaccctgttccaggtgcaggccaggtcacggggtt
gtccgggagtgcggtcctcaaggagacacgctttgccagaagtgtggcccgggaaccttc
tcagaggaggatttcaacatcaaaccctgccaggcttgcagtcagtgctctgatgaagaa
gtggagatccaatcctgtatgcacaactttgacacactctgcatggataagaagctgcac
attggccctgctggtgccgatggggccttgaatattcctaatggggcggtgatggaggaa
aatgaggaggaagacggcagccccgcaccaggaccgtccaagtttacaccgcaggatgag
ggtggcagcaacaacattctcgtctacgtgtctgttctggctgctgtggtgctgggcttg
ttggtttatgtggcttataaatgttggaggtcgtgcaaacagaagaaggccctctccaag
gcacgtgtggcagagctggcagcatctccagaaggagaaaagctccaaagtgacagcggt
gtttttctggactcttacagcctgcaggacaaccagcccagtaaaggtaccaagagagac
agcaagctcgacaaccgtctgtacgtcaacttgccgccgcacaaacaggaggaggtggag
cgcctcctgcaagaggcaagcggccgtggatggaggcaccttggtgcagcgctgggctac
gaaccggaacagctggacctgttcggacgcggcgaggccccggcgcacacgctcctgtct
aactgggcccagagagagggctccgctctgggactgctgagctcggcgctgaaccgcatc
gagagacccgatgtggtgaccgcccttaacagcacacagcagggtgtttctgtggtgtga
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