Xiphophorus couchianus (Monterrey platyfish): 114142030
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Entry
114142030 CDS
T05908
Name
(RefSeq) DNA-binding protein SATB1-like isoform X1
KO
K23225
DNA-binding protein SATB1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114142030
03036 Chromosome and associated proteins [BR:
xco03036
]
114142030
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
114142030
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114142030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
Homeodomain
Motif
Other DBs
NCBI-GeneID:
114142030
NCBI-ProteinID:
XP_027868843
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All DBs
Position
3:6833089..6916129
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AA seq
882 aa
AA seq
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MMDHLSESCLGKENSELLVGGLAEAKAPPAKLPRLEQNGSPLGRARLGSAGAKLAGIPYK
PAGHLLKACHKRGNMLPVFCVVEHYENPMDFDSKEEHAEFVLLRKDMLFNQLIEMALLSL
GYSHSSAAQAKGMIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLED
LPPEQWSHSTVRNALKELLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGR
WYKHFKKTKDMMGMRQPSQLEGYLGTCVLRESPRANALAEMDSLSDLSPPGSNHNHNHLG
FSQQQPIPGSTAEQTPSSPVPPLPHAPPHGGQTGGRQPQLPGLHHPGLVSTPISPQLVNQ
QLVMAQILNQQYAVNRLLAQQSLSQQYLNHPPVNRNSHTKPMEPQVGSNTEVSSEIYQWV
RDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEAE
RDRIYQEERERSLTAASAMGSTPLISTPTSRPIQPRREDCNSARPEDWNPRIPVGISPVS
TQRHPLTPTTATLQNVKPSPLPSEWNGKTENCILNITSTIYDEIQQEMKRAKVSQALFAK
VAASKSQGWLCELLRWKEDPSPENRTLWENLSMIRRFLSLSQAERDAIYEQESSAGQQHH
NERPPHLIHVSTDQLQAQLPQSQQQHQPSLSLHPSQPLLSQQPLQQQNNAGPRLPPRQPS
TASPAETEDEGGRGIKSRGGGGKISLEALGILQSFIQDVGLYPDEEAIHTLSAQLDLPKL
TIIKFFQNQRFYVNHPAKAPKDSNTAANNNNCGSTAANTSSSSSSRSSPAFEEELTDFRE
SGELLKELDESTQTTATIFSIKMEEHLGRGAEVQSESEHEVK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccatctcagcgagtcgtgtctgggcaaggagaactcggagctactggtaggc
ggcctggccgaagccaaggccccgccggccaagctgccccggctggagcagaacggcagc
cccctgggccgggccaggctgggcagcgccggggccaagctcgccgggatcccgtacaaa
cccgctggccacctgctgaaagcctgccacaagagaggcaacatgctgcccgtgttctgc
gtggtcgagcactacgagaaccccatggacttcgacagcaaggaggaacatgccgagttc
gtcctgttgcgcaaggacatgctcttcaaccagctcatcgagatggccctgctgtcgctg
ggctactcccacagctccgcagctcaggccaaaggtatgattcaggtggggaagtggaac
cccgtcccgctgtcgtacgtgacagacgcgccggacgccacagtggccgacatgctgcag
gacgtctaccacgtggtcacgcttaagatccagctgcacagttgtcctaagctggaggac
ctgccgcccgagcaatggagccactctacagtaagaaacgccctcaaggagttactcaaa
gacatgaatcagagctctctggctaaagaatgccctttatcacagagtatgatttcctcc
attgtgaacagcacttactatgcaaatgtgtcggcggcaaagtgtcaggaatttgggcgc
tggtataaacatttcaagaagacaaaagatatgatgggcatgcgccaaccctcccagctg
gagggctacctggggacgtgtgtcctccgtgagagcccgcgtgccaatgcgctagcggag
atggacagcctgtcggatctctcccctcctggctccaaccacaaccacaaccacctgggt
ttctcccagcagcagcccatccctggcagcaccgcagagcagactccatcttcaccagtg
ccgccactgccgcacgctccaccgcacggcggccaaacgggcggccggcagccgcagctc
cccggcctacaccatccggggttggtgtccacgcccatcagcccccagctggtgaaccag
cagctcgtgatggcgcagatcctcaaccagcagtacgcggtgaaccggctgctggcgcaa
cagtccttgtcgcagcagtacctcaaccacccacctgtaaaccgcaactcccacaccaag
ccgatggagcctcaggtgggatccaacacggaggtttcctctgagatctaccagtgggtg
agggacgagttgaagcgggccggcatctcgcaggctgtctttgcccgggtggccttcaac
agaacccagggcttgctgtctgagatcctgcgtaaggaagaagaccccaagacggcgtcc
cagtcgctgctggtcaacctgcgcgccatgcagaacttcctgcagcttccggaggctgag
cgcgaccgcatctatcaggaggagagggagcggagcctcacggcagcgtccgcgatgggc
tccactcccctcatcagcacgccgaccagtcggcccattcagcctcggagggaagactgc
aacagcgcgaggccggaggactggaatccccggatcccagtgggaatttcacctgtgagc
acacagcgtcacccactcaccccgacaactgcaacactgcaaaatgtaaaaccatcgcct
ctgccgagcgagtggaacggcaagaccgagaactgcatcttgaacatcacctccaccatc
tatgacgagatccagcaggagatgaagcgggccaaagtgtcccaggccctgtttgccaag
gtggctgcgtccaagagccagggttggctttgtgagctgctgcgctggaaagaggatccg
tctccagagaaccggacgctctgggagaacctgtccatgatccgtcggttcctgagcctc
tcgcaggccgaacgcgacgccatctacgagcaggagagcagcgccgggcagcagcaccac
aacgagaggccgccacacctgatccacgtttccaccgaccagcttcaggctcagctgcct
cagtctcagcagcagcaccagccctcgctgtcgctccacccctcccagcctcttctctcc
cagcagcccttgcagcagcagaacaacgccggcccccgactgccgcctcgacagccgtcc
accgcctccccggccgagacggaggacgagggcggccgcggcatcaagtcccgcggcggc
ggggggaagatctccctggaggctctgggcatcctgcagagcttcatccaggacgtgggc
ctttaccccgacgaagaggccatccacacgctctccgcccagctggatctgcccaagctc
accatcatcaagttcttccagaaccaacgcttttacgtcaatcacccggccaaggcaccg
aaggacagcaacaccgccgctaacaacaacaactgcggcagcacggcggcgaacaccagc
agcagcagcagcagccgcagcagccccgccttcgaggaggagctgacggacttcagggag
agcggggagctgctgaaggagctggacgagagcacgcagaccaccgccaccatcttctcc
atcaagatggaggagcacctgggccgcggcgccgaggtgcagtccgagtctgagcacgag
gtcaagtag
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