Xiphophorus couchianus (Monterrey platyfish): 114142119
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Entry
114142119 CDS
T05908
Name
(RefSeq) brevican core protein-like isoform X1
KO
K06795
brevican
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xco00535
]
114142119
00536 Glycosaminoglycan binding proteins [BR:
xco00536
]
114142119
04091 Lectins [BR:
xco04091
]
114142119
Proteoglycans [BR:
xco00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
114142119
Glycosaminoglycan binding proteins [BR:
xco00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
114142119
Lectins [BR:
xco04091
]
C-Type lectins
Lecticans
114142119
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
hEGF
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
114142119
NCBI-ProteinID:
XP_027869008
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All DBs
Position
3:3534398..3552402
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AA seq
1212 aa
AA seq
DB search
MKLDMSPHLLLFTLYLLVLPSSPTPHQEPDDFKLLQVTIPTTVPVLAMLGGSLTLPCLVS
LTHPPPSPPTNGRHAVLSVPRVKWSVLRHGQETEILVARGDRVRVNEVYKDRASLLNYAF
SPADLTLRLQSLRQNDTGFYRCEVQQGLEDADDVVLVKVKGVVFHYRDASSRYAFTFERA
TVACEEIGAEIASPEQLLAAYHSGYEQCDAGWLSDQSVRYPIQMPREGCFGDMDGMPGVR
NYGLLDHDELYDVYCYVENIQGEVFHGSAPERFTFWEAKAYCVSHGAELATTAQLYAAWN
DGLNHCSPGWLADGSVRYPIVTPRERCGGGEPGVKTIYQYSNQTGFPDILSQHDVYCFKS
NNGPYTESPQDALATEPEDIGQDIVFQATQDDVSLSEVAPEGREEMQHPQTANPVNQHPE
IPSQTSTPLSDHEETFSTSENWELIKKESYPDSYQPAPKETPNKDHQESLVFLTSSPNFD
AGTNENTTPVTYITASETVMPTEGHTPETVSLDWLSVNVTSEGDVEEIHHEENDLPVSQE
DYTTDVSSGPFSVTESAASVGPEENATHTVVQISAETTSPQNEEVDVPSTSMFPALAESL
TEEISGEGTSDAQEEETKDSVTPNFMGIDILSTSVMVPTSDSGYTLTPEHSDVPTESALQ
LNIHDEDINSSSNTTEADDLTEQSGHIHPAELPNVEVPLVTDETFLVSPDSVTQVPLSVK
VEVRSDDRTFYPESPTPSEVEPLEENQDPLEENQEVFLNTVPNPTEDDLNEAWDESSGEN
PQINPELNATNPTLSADHTIDGSDAPPLTEIKITRIPDLSLTPRWEPVPSTPPAQESRSD
REYSAEPPVNDKSNEISKEQEFPRTRSRTHAAQGSEGSAGEPTTDEPPVHICTWHPEEED
SSPAMPTADVDVTISAPHSDREVFKVNERERTAMGAALPAAKVPAATQGDSCLENPCLNG
GTCVDGDPLRCICLPGYGGALCQRDVEECEPGWEKFQGFCYRHFSKRQSWEAAEQHCRLC
GGHLLSVMTPEEQHHINDKYREYQWIGLNDRTIEGDFRWSDGNPLLYENWYKNQPDSYFL
SGEDCAVMAWHDGGHWSDVPCNYHLSYTCKKGVSSCGEPPRVHHALVFGKKRSRYETNSR
IRYYCEEGFIQKLNPVIRCLPGGHWEAPQITCVPTRTVEGDSSPSQPDQHEDVMVAAAEK
AAPLYRDIKWNS
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggacatgtctccacacctcctgctgtttaccctctacctccttgttctaccg
tcgtccccgactccccaccaagagccagatgatttcaagcttctccaggtaaccatccct
accactgtgcctgtgcttgccatgctggggggttcactgactttgccctgcctggtgtcg
ctcacccacccaccgccgtcccctcccactaatgggcgccacgctgtgttgtctgtgccc
cgagtcaaatggagcgtccttaggcatggtcaagagacggagatcttggtggcccgtggc
gacagggtgagagtcaacgaggtctataaggacagagcctcgctgctgaactacgccttc
tcccccgcagacctcaccctgcggctgcagagcctgaggcagaacgacactggcttctat
cgctgcgaggtgcagcaggggctggaggacgctgatgatgtggtgctggtcaaggtcaag
ggtgtggtgtttcattatcgcgatgcatccagtcggtacgcctttacctttgagcgcgcc
acagtggcctgtgaggagattggggctgaaattgcctccccagagcagctcctcgcagcc
tatcacagtggatacgagcagtgtgatgcaggatggctgtcagaccagtctgtcagatat
cccattcagatgccaagagagggatgctttggagacatggatggcatgccgggagtacgg
aactatggactgttggaccatgatgagctctatgacgtctactgctatgtggagaatatt
caaggtgaggtgttccatggctccgcccccgagcgcttcaccttctgggaggctaaggcc
tactgtgtgagtcacggtgcggagctggccaccacggctcagctttatgcagcctggaat
gatggactgaaccactgcagcccgggatggctggcggatgggagtgtgcggtaccccatt
gtcacccctagagagcgctgtggaggaggggaacctggagtgaaaaccatctatcaatac
agcaatcaaacaggcttccctgatattctctctcagcacgatgtctattgttttaaaagt
aataatggcccttatactgaatcccctcaagatgctcttgccactgagccagaggacatt
ggccaagacattgttttccaggccactcaggacgatgtcagcctgagtgaagttgctcca
gaagggagggaggagatgcaacatccccaaacagcaaatccagtaaaccagcaccctgaa
attccttcacagacttcaactcccctgtctgatcatgaagagacattctccactagtgag
aactgggagctgataaagaaggaaagttaccctgattcttatcagccagcacctaaagaa
accccaaacaaagatcaccaagagtctcttgtatttctgacatcttctccaaactttgat
gctggaaccaatgagaacactacacctgtaacttatatcacagcatcagaaactgtgatg
cccacagagggtcacaccccagagactgtgagcttggattggttgtctgttaatgtcaca
tctgaaggtgatgtggaggaaattcatcatgaggagaacgaccttccagtttcacaagag
gactacacaacagatgtctcttctggacctttctctgtaactgaatctgctgcttcagta
ggaccagaggaaaacgccactcatactgttgtacaaatttcagctgaaacaacttcaccc
caaaatgaagaagttgatgttccttccacctccatgttcccagctcttgctgagagtttg
acagaagagatttccggagaggggactagtgatgctcaggaagaggaaacaaaggactct
gtgactcctaattttatgggaattgacattttgtccacttctgtcatggtccccacttct
gactcaggttataccctcacaccggagcactctgatgtaccaacagaatcagctctccaa
ttgaacattcatgatgaggatataaacagctcttcaaacactacagaagctgatgattta
acagagcagagtggacacatccatccagcagagttaccaaacgtagaagttcccctagtc
acagatgagacattcctggtatctccggactctgtaacacaagttcctctttctgtaaaa
gtggaagtcagatccgatgatagaacattctatccagaaagtcccactccttctgaggtt
gaaccgttggaggagaatcaagacccgttagaagaaaaccaagaggtcttcctcaacact
gtcccaaatcccacagaggatgatttaaatgaggcgtgggatgaatcctcaggagaaaat
ccacagataaatcctgaactcaatgcgacaaacccgactctctcagctgaccacaccatt
gatggcagtgatgctcctcctctgaccgagataaaaattacacggatccctgatctgagc
ctcacacccaggtgggagccggtgccttcaaccccaccagcacaggagtctcgctctgat
cgggaatacagtgcagagcctcctgtcaatgacaaatctaatgagatctctaaagagcaa
gaatttcctagaacacggagcagaactcatgcagcgcaaggatcagagggaagtgcagga
gagcccaccacagatgagcccccagtccacatctgcacatggcatcctgaagaagaggac
agctcccctgcgatgcccactgctgatgtggatgtgactatttctgctccccattcagat
cgagaagtttttaaagtgaatgaaagggagcgcacagccatgggggctgctcttcctgca
gccaaagttcctgctgcaacacaaggagactcctgcctggagaatccttgtctgaatggg
ggaacttgtgttgatggtgatccactaaggtgcatttgcttgcctggttatggaggagcg
ttgtgtcaaagagatgtggaggagtgtgagccaggttgggagaagtttcagggcttttgt
tatcgtcacttcagcaaacggcaaagctgggaagcagcagagcagcactgtcggttgtgt
ggtggacatctgctttctgtcatgactcccgaggagcaacatcacatcaacgataaatac
agagaatatcagtggattggactaaatgacagaaccattgagggagacttccgctggtct
gatggaaaccctctgctctatgagaactggtacaaaaaccagccagacagctacttcctg
tctggggaggactgcgcggtgatggcttggcacgatggcggtcactggagcgatgtgcca
tgtaactaccacctgtcctacacctgcaagaagggtgtctcgtcctgtggagagccccct
cgggtccaccatgctctggtgtttgggaaaaagcggtcgcgttacgagaccaacagcagg
attcggtactactgtgaagagggttttatacagaagctcaaccctgttattagatgtctg
cctggaggccactgggaagcgcctcagattacctgcgtgccaactcgtacagtggaaggg
gattcctcaccttcccaacctgaccagcatgaggacgtcatggttgcagctgcagagaaa
gcagcaccgctttaccgggatataaagtggaattcttaa
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