Xiphophorus couchianus (Monterrey platyfish): 114142185
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Entry
114142185 CDS
T05908
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114142185 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114142185 (prpf3)
Spliceosome [BR:
xco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114142185 (prpf3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
114142185
NCBI-ProteinID:
XP_027869122
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All DBs
Position
3:complement(14514307..14522352)
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AA seq
691 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKKKTTDQLRPILDDSAG
GFVERLFEALEESRNSRGGKGASEKHRKRELKEVFGEESDTGAVQVAPDAGDGTTAKRKR
VPRFQEVEEPEVIPGPPSESPGMLTKMQIKQMMEAATKQIEERKKQLSFTSPATGDGSRL
LGAAAGGASSIAPSQAASFMNDAIEKARKAAELQARIQSQLAQKPGILNTFVNTGPPNLV
ALANLHAMGIAPPKVDIKEVNKPTPLILDDKGRTVDATGKEIELTHRMPTLKANIRAVKR
EQFRQQLKEKPGDDIESTSYFDQRVLITPAQRTRRGFKFHEPGRFEKIAQRVRTKAQLER
LQNEIAQAAKKTGIQASTKLALIAPKKEIGEGDVPNIEWWDSYILSTYMPINPESKFEEF
DLFGVTNLVEHPAQISPPVDTDKPVTLGVYLTKREQKKLRRQTRREAQKEVQEKVRLGLM
PPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKEKK
VKKLKEDLTNGVHATVYRIRNLQNPAKKFKVEANANQLYLTGTVVLHRDVNIVVVEGGPK
AQKKFKRLMMHRIKWEEHNSKRDDPDGDDDTRRNNKCWLIWEGTAKERSFGEMKFKQCPT
ENMAREHFKKHGTEHYWDLALSQSVLEGSDD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgccaaagcgagaggtggaggagctgcgaccctgggtggagcgcaccgtgaag
aaggtgctgggtttctcagagcccactgtggtcaccgcagctttacactgcgttgggaag
gggctggataaaaagaagaccacagaccagctgcgtccgatcctcgatgactctgcagga
ggttttgtggaacgtctgtttgaagctctcgaggaaagccgcaacagccgtggcggcaaa
ggagcgagtgaaaaacaccgcaagagagaacttaaggaggtttttggagaggagtcagac
acaggagcagtgcaagttgctccagatgcaggagatggaacaacagccaagaggaagcga
gtcccacgctttcaggaggtggaagagcccgaggtgattcccggacctccatctgaaagc
cctggtatgctcaccaaaatgcagatcaagcagatgatggaagcagccactaagcagata
gaagaaaggaagaaacagctgagctttacttcgcctgcaacaggtgatggatcacggctt
cttggtgctgctgctggtggagcctcgtctattgccccctctcaggctgccagctttatg
aacgatgccatagagaaagcccgcaaagcagctgagcttcaggcccggatccagtcccag
ttagctcagaagcctggtatcctcaacacttttgtgaacacggggcctccaaacctagtc
gctcttgctaatctgcacgccatgggaattgcaccaccgaaagttgatattaaagaagtg
aacaaaccaacgcctctgatcctggacgacaagggcagaactgttgatgcgacaggcaaa
gagattgaactcacacatcgtatgcccacactcaaagccaacatacgagctgtaaagagg
gagcagtttcgccagcagctgaaggagaagcctggggacgacatagagtccacgtcctac
tttgaccagcgggttctcataactccagcccagcggactcgcaggggcttcaaattccac
gaaccgggtcgctttgagaagattgctcagagagttagaaccaaggcccagctggagagg
ctccagaatgagattgcccaggctgcaaagaaaacaggaatccaagcttccaccaaattg
gcattgattgctccgaaaaaagagattggagaaggagatgtgcctaatattgagtggtgg
gattcgtatatattaagcacctacatgcccataaatccggaatcaaagtttgaagagttt
gacctttttggtgtgacaaacctagtagaacatcctgcccaaattagtcctccagttgac
acagacaagccagtaactttaggtgtgtatctaacaaagagagaacagaagaaactgaga
agacaaacacggagggaagcacaaaaagaagtgcaggaaaaggtccgtctgggtctgatg
cctccaccagaaccaaaagtacgtatctccaacctgatgagagtcttgggaacggaggct
gttcaggatcctacaaaagtagaagcccatgtgagagcgcagatggcaaagagacaaaaa
gctcatgaagaggccaatgcagctcgcaagctgacagcagagcagagaaaagaaaagaag
gttaagaagttaaaagaagatctaactaatggcgttcacgctacagtatacaggattcgt
aacttgcaaaatccggcaaagaaatttaaggtggaggccaatgcaaaccagctatacctg
acgggcaccgtggttctgcacagagacgtcaatatagttgtggtggagggaggccctaaa
gcccagaaaaagtttaagaggctgatgatgcacagaatcaaatgggaggaacacaacagc
aaaagagatgatccagatggcgatgacgatacaagaagaaacaacaaatgttggctgatt
tgggagggaacggctaaggagcggagttttggtgagatgaagttcaagcagtgccccact
gagaacatggctcgagagcacttcaagaaacacggcacagaacactactgggacttagcg
ctgagccagagtgtgttggaaggctcagacgattga
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