Xiphophorus couchianus (Monterrey platyfish): 114142194
Help
Entry
114142194 CDS
T05908
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114142194 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114142194 (trip13)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
114142194 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
nSTAND3
TIP49
Viral_helicase1
AAA_18
AAA_24
AAA_14
AAA_5
TsaE
NPHP3_N
bpMoxR
RuvB_N
NACHT
AAA_33
AAA_7
AAA_28
Cytidylate_kin
RNA_helicase
ABC_tran
DUF815
AAA_11
AAA_30
AAA_17
ATPase_2
AAA_25
IstB_IS21
nSTAND6
NB-ARC
ATPase
Rad17
AAA_19
nSTAND_NTPase5
DUF6393
Mg_chelatase
PduV-EutP
SLFN-g3_helicase
PhoH
Sigma54_activat
AAA_3
Cytidylate_kin2
DnaB_C
nSTAND1
Motif
Other DBs
NCBI-GeneID:
114142194
NCBI-ProteinID:
XP_027869137
UniProt:
A0A3B5MSJ8
LinkDB
All DBs
Position
3:17236902..17243956
Genome browser
AA seq
420 aa
AA seq
DB search
MEGDQMEMTPIPNIHVEVHVKSLSTAKSSEVKMHVQALLNRHSMTFGNYRWTEFDDNFLH
KHVDSVVIDLQETTQPLDLKSCDVSIHVFTLNEEGPSTLSLEEDENLSAANHWLLPTAEF
DGLWESLVYETGVKTKLLDYVTTTIYFSDKNVDSNLISWNRVVLLHGPPGTGKTSLCKAL
AQKLSIRLSSRYTIGQFVEINSHSLFSKWFSESGKLVTKMFQKIQLLIDDKDALVFVLID
EVESLTAARKACQAGTEPSDAIRVVNAVLTQLDQIKRYPNVVILTTSNVTEKIDLAFVDR
ADIKQYIGPPSEKGIYNIYLSCLEELMKCQIIYPRQQLFTMYELETMGFVRSEISELSLK
LRNIAVKSKGLSGRALRKLPFLAHALFVQTPPVTLERFLKAICRAVDKQREEEANLINGV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgaccaaatggagatgacacccatcccaaacatccatgtggaggtccatgtt
aaatctcttagcacagctaaatcgtctgaagtgaagatgcacgttcaggcgctgctgaat
cgccacagcatgacttttggaaactacagatggactgagtttgatgacaatttcctgcat
aagcatgtggattctgtagtcattgatcttcaggagacgacacagcccctcgatttgaag
agctgtgacgtctccattcatgtcttcactctgaatgaggaaggacccagcacactcagt
ttggaggaggatgaaaacctttcagcagctaatcactggctcctgccaacagctgaattt
gatgggctctgggagagtcttgtatatgaaacgggagtgaaaaccaagcttttggattat
gtcacaacaacaatttacttctcagataaaaacgtcgacagcaaccttatttcctggaac
cgcgtcgtgcttcttcacggacctccaggcacagggaaaacatcactctgcaaagctctt
gcccagaaactgtcaatcaggctgtcaagtcggtataccattggccaatttgtggagatt
aacagtcatagtttgttctcaaaatggttctcagagagcggtaagctggtcacaaagatg
tttcagaaaatccaactactgattgacgacaaagacgctctggtgtttgttttgattgat
gaggtggagagcctgacagcagccaggaaggcctgccaggcgggaacagagccgtctgat
gccatccgagtggtcaacgccgttctcacacagctggatcaaatcaaacggtatcccaac
gtggtcatcctgacgacgtccaatgtgactgagaagatcgacctggcgtttgtggacaga
gccgacatcaagcagtacatcggacctccgtcagagaaaggcatctataacatctatctc
tcctgtctggaagagctgatgaaatgccagatcatctaccccaggcagcagctttttact
atgtacgagctggaaactatgggctttgttaggagcgagatttctgagctcagtctgaag
ctgaggaacatcgctgtaaaaagcaaaggtctgagtggaagagcgctcaggaaattaccc
tttctagctcatgccctctttgtacagacaccaccagtgactctcgaaaggttcctgaag
gcaatatgccgagcggtggataaacagagggaggaagaggccaatctgatcaatggtgtc
tga
DBGET
integrated database retrieval system
