Xiphophorus couchianus (Monterrey platyfish): 114142204
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Entry
114142204 CDS
T05908
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K03145
transcription elongation factor S-II
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114142204
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
114142204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
EAD11
Motif
Other DBs
NCBI-GeneID:
114142204
NCBI-ProteinID:
XP_027869148
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Position
3:complement(19886445..19897094)
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AA seq
714 aa
AA seq
DB search
MTREEDLIRIAKKLDKMVSRNNTDGAIDLLKELKSFNMTLKLLQETRIGMSVNNIRKHCR
DEEVIALAKVLIKEWKRLLDSGDSHCEKVDELKNGLDARKPAAATNSCSSEPQSSHRRLE
AKPKHESDSDKNRNEKQNDNHINKKSHADDPGTDGKHLEGHQSEKHLQEIRAEKQTPAEN
PKPETDHKKQRHAPDLQSGKHKSEPIKHRSLEDLKKMRNAELLKKEKPPEEPKKYTDDGK
QDKSRAEGRHEWPVGTPQRGKPAEAHKLIFERRGVLDSSVLYPTRFPSPPRPARPLLPIK
RPSLDSKKDRKDGKESSSRHPHSQPASPPPKRPAAEIKKERKVPPDPNAPIAPLPFHLHP
PPPRKEPPDPNAPLPPLPLHLHPPAAPPKRTSVDGGKDRESSRKPSSDSKPLPQKKSADC
VKKDRKDSDDGKASKKLSEDTKRERKDSSDSKPPSTKKPTIEVKKEKHRKDSSELKPSQP
AKGHSTDSKSVRRESLGSKPLGQPQRKLSTDSLDRKGKTEAPRTPTTPTSPLSPSFSSPG
GPLSPHLATGDSVRDKCIEMLTAALRTDNDYKDFGANCDGMAAEIEDHIYQEIRATDMKY
KNRVRSRISNLKDPKNPGLRRNVLAGSIELSRIASMSAEEMASDELKQLRNVLTQEAIRE
HQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgactcgagaggaggacctgatccggatcgccaaaaagctagacaagatggtgtctaga
aataacacggacggagccatcgacctgctgaaggagttgaaaagcttcaatatgacactg
aagcttctccaggaaacaagaattggcatgtctgtgaacaacatcaggaagcactgcaga
gacgaagaagtcatcgctttggcaaaagtcctcattaaagaatggaagagacttctggac
tctggagattctcactgtgagaaagttgatgaactgaagaacggtttggatgccaggaaa
cctgcagcagctacaaacagctgctcctcagagccacagagcagtcacaggaggctggag
gccaaaccgaaacatgaatccgattctgacaaaaacaggaatgaaaaacagaacgataac
cacataaataaaaagagccatgcggacgatcccgggacggatggaaaacaccttgaaggg
caccaaagtgagaaacaccttcaagaaatcagagcagagaaacaaacccctgcagagaat
cccaaaccggaaacggatcataagaaacagaggcacgcaccagacctgcagagtggaaaa
cacaagtcggagccaatcaagcacagatcactggaggatttgaagaagatgagaaacgct
gagctactaaagaaagagaaacctcccgaggagcctaagaaatacacagatgatgggaag
caggataaaagcagagcggaaggcagacacgagtggcctgtcggcacacctcagagaggg
aagccagctgaagctcataagctaatctttgaaaggagaggagtgctggacagcagcgta
ctgtatcccacccgcttcccctccccccctagacccgctcggcctcttctacccatcaaa
cgtccatctctggactcgaaaaaagacaggaaggatggtaaagagtcttcctctcgacac
cctcactctcaaccggcctctccgccgccaaagcgacctgcagcggaaatcaagaaagag
aggaaagttccaccggacccaaatgctccgatagctcctcttcctttccacctccatcct
cctccaccgagaaaagagcctcctgatcccaacgcgcccctccctccgctcccactccat
ctccacccccccgctgctcctccgaagcgcacctctgtggatgggggcaaggacagagag
agcagcaggaagccatcctcagactcaaagcctctgccgcagaaaaagtctgcagattgc
gtaaagaaagacaggaaagattcagatgatggcaaagcgtctaagaaactgtcagaggac
accaagagagaaaggaaagattcttctgactctaaaccaccctctaccaaaaagcccacc
atcgaggtcaaaaaagaaaagcacaggaaggattccagtgaactgaagccaagccaacct
gcaaaaggccattccaccgactccaaatccgtcaggagagagtctttaggctcgaagcct
cttggacaaccacagaggaaactgtctactgacagcctggacagaaagggtaaaaccgaa
gcacccagaactcccaccaccccgaccagtcctctgtcacccagcttcagctctcctggg
ggtcctctgtcccctcacctggctactggagactccgtcagagacaagtgcattgagatg
cttacagctgccctgcggacagacaatgactacaaagattttggagcaaactgtgacggt
atggcagcagagattgaggatcatatctaccaggagatcagggccacagatatgaagtac
aagaaccgagtccggagccgcatcagcaacctgaaggaccccaagaacccgggactccgc
agaaacgtcctggccggcagcattgagttgagccgcatcgccagcatgtctgctgaggaa
atggccagtgatgaactgaaacagctgaggaacgtcctaacccaggaggccatcagggag
caccagatggccaaaaccggtgggaccaccacagacctgctacagtgcggcaaatgcaag
aagaagaactgcacctacaatcaggtgcagacccgcagtgctgatgagccgatgaccaca
tttgtcctctgcaatgagtgtggcaaccgctggaagttctgctga
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