Xiphophorus couchianus (Monterrey platyfish): 114142227
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Entry
114142227 CDS
T05908
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114142227
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
114142227
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
114142227
NCBI-ProteinID:
XP_027869176
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All DBs
Position
3:21914276..21918593
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AA seq
492 aa
AA seq
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MSFPQLGYPQYLSASQAVYGSERPGVLTPSSRGGTTEIGGSPSATAAAVTSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKDSPGVHPATFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGNRSKEDGEDGNLFGSGDEAEKNEDEEEIDLESIDIDKIDENDGDQSNEDDDDKSTEG
GREHRGSLGAPGDLDSLEKRRAFALQAHEAFEKSKSVMSVHAGGKENSDGNNNTTRVLSP
DRPGSFPLPSNNKPKIWSLAETATSPDSSSQKPSSPCAPGANSNHPSAPHQIQTHPAFLP
SHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNRHHHHHHSSHPLSAQQQQPTSVVV
SPVAASAALSNDSKAPADTPSPKHIEHERSDSPPTQTLKSSFRPIQDRSSLPSSARSPQD
ATQRVLTALSSA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagttaggctacccgcagtatctaagtgcctcccaggctgtatacggg
agcgagagaccgggagtgcttacgccttcatcccgaggagggaccacggaaatcggtgga
agtccgtccgccacggcggcggccgtcacgtcggtgctgggcatgtatgcaaacccgtac
gcacacaactacagcgcgtttttaccttacaccagcgcggatctggctctcttctcgcaa
atggggtctcagtatgagctcaaggacagccctggcgttcaccccgctactttcgcggcc
cacacgtctccagccttttacccatacggccagttccagtatggcgacccggcgaggccc
aagaacgccaccagggagagtaccagcactctgaaagcttggctcaatgagcacaggaag
aacccgtacccaacgaaaggcgagaagatcatgctggccatcatcaccaagatgacactg
acgcaggtctccacctggttcgccaatgccaggaggaggctcaagaaggagaacaaggtg
acctgggggaacaggagcaaggaggacggcgaagacggaaacttgttcggcagtggagac
gaggcagagaagaacgaagacgaggaggagatcgatttggagagcatagatatagacaaa
atcgacgagaacgacggggatcagagcaatgaggacgatgacgataagtccacggaggga
ggcagggagcacaggggcagcctgggcgcgcccggagacttggacagcttggagaaaaga
cgggccttcgccctacaggcccacgaggcctttgagaaatccaagagcgtgatgtcggtt
cacgcagggggcaaggagaactcagacggcaacaacaacactacgcgagttctgtcccct
gacagacctgggagttttccccttccctctaacaataaacccaaaatctggtctctggcg
gagaccgctaccagccccgacagctcgtctcagaaaccttcctccccttgtgcgccaggg
gccaacagtaatcatccatcagcgccccaccagattcaaacccacccggccttcctcccc
agtcatggactgtacacttgccagattggaaagttccacaactggaccaacggggccttc
ctgggccagaactccctgctgaatgttagatctttcctgggagtaaaccggcaccatcac
caccaccacagcagccatcctctctcggcccagcaacagcagccgacatccgtggtggtg
tcgccggttgcagcttcagcagcgctcagcaatgacagcaaggccccagcagacaccccc
agtcccaaacacatagagcacgaaagatccgattcacctccaacacagaccctcaagtcg
tcattccgtcctattcaagacagatcctctctgccttccagcgccaggagtccccaagac
gccacgcaacgggtcctcactgctctctcgtcggcttga
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