Xiphophorus couchianus (Monterrey platyfish): 114142256
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Entry
114142256 CDS
T05908
Name
(RefSeq) nuclear receptor ROR-alpha B-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114142256
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xco03310
]
114142256
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
114142256
Nuclear receptors [BR:
xco03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
114142256
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
114142256
NCBI-ProteinID:
XP_027869233
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Position
3:complement(15536051..15562758)
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AA seq
525 aa
AA seq
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MPAPARALEQPTEVSERARRPIQRCDRSGMEYEESDFLPADTPRKKGGAVSKKTHLTQIE
VIPCKICGDKSSGVHYGVITCEGCKGFFRRSQLPTVSYSCSRQSNCQIDRASRNRCQHCR
LQKCLAQGMSRDAVKFGRMSKRQRDSLIAEVERHRQQQQQQQLQDDTQVELSYPPKNRQD
HSPQLLQPIATPYPYVGDAYGAEVHPYLVYSPSDSQGYRGSGVSPTSRFQGRGDSGGHHD
IRGFDSRQQHQDLMTLHSYSPLDGLYNHYPHSLRNIDELCASVVRSHRETSQYRLEELQA
LRWKVFSREEIQAYQSKTVDEMWQHCAVRLTDAVQYVVEFAKHIPGFRMLSQNDQIALLK
TGSMEVVLVRMCRFFNTENNTVFFDGKFAGTEVFKSLACGDLIAAVFDFAHGMCALKLTE
QQLALFSALVLINADRPSLEDRVRVQRVHRSVEVGLTHILHRDNHDSLLHKLYQKMAVLR
SLCSLHMEKLRWFSQRYPLTAHSLFPPLYKELFASEAELLPGATH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgccggcccgggcgctagagcagccaacagaggtgagtgaaagagcgcgtagg
cccatccagcgctgtgacaggagcggcatggaatatgaggagtcagactttctacctgca
gacacccccaggaaaaaaggaggcgccgtgtccaagaagactcatttgacccagattgaa
gttatcccatgcaagatttgtggcgataagtcttctggagttcattatggagtcatcaca
tgtgaaggctgcaagggctttttccggcgcagccagcttcccaccgtatcctactcctgc
tccaggcagagtaactgtcagatcgaccgggccagccggaaccgctgccagcactgccgc
ttgcagaagtgcttggctcagggcatgagcagagatgctgtgaagtttggccgcatgtcc
aaacgtcagagggactctcttattgctgaagtggagcgacacaggcagcagcagcaacag
cagcagcttcaagacgacacgcaggtggagctgtcctacccacccaaaaaccgccaggac
cactccccacagctccttcagcccatcgccacaccgtacccctacgtcggtgacgcctac
ggcgcagaggtccacccctatctggtttactccccgagcgactcgcaggggtaccggggc
tccggtgtctcccctacgtccagattccaggggcggggggacagtggtggacaccatgat
atcagaggatttgactccagacagcaacatcaggatctcatgactcttcattcctacagt
cctctcgatggcctctacaaccactatcctcactctctgcgaaacatagatgagctgtgt
gccagcgttgtgcgttcccacagagaaactagccagtacagactggaggagctgcaggct
ctcagatggaaagtattcagtagagaggagatccaagcctaccagagcaagacagtggat
gagatgtggcagcactgtgccgtccgactgactgatgctgttcagtatgtggtggaattt
gcaaaacatatcccaggtttccggatgctcagccagaacgaccagatcgcactactcaaa
actggctccatggaggtggttctggtccgaatgtgccgcttcttcaacacagaaaacaac
actgttttctttgatggaaaatttgctggaactgaagtcttcaagtctctggcgtgcggt
gatttaatcgcagcggtgttcgacttcgctcacggtatgtgtgctctgaaactcacagag
cagcagctcgccctcttcagtgctctggtcctaatcaatgctgaccgtccctctctagag
gacagagtgagagtccaacgagtacacagaagtgtggaggtgggactcactcacattctt
caccgagacaaccatgatagtctgttgcataagctctaccagaagatggcagtgttgcgt
tcgctgtgcagcctgcacatggagaagctgcgctggttcagccaacgatacccgctcact
gctcactctctgttccccccgctgtacaaggagctgtttgcgtccgaggccgagctgctg
ccgggggccactcactga
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