Xiphophorus couchianus (Monterrey platyfish): 114142258
Help
Entry
114142258 CDS
T05908
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114142258 (usp5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114142258 (usp5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114142258 (usp5)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114142258 (usp5)
Peptidases and inhibitors [BR:
xco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114142258 (usp5)
Ubiquitin system [BR:
xco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114142258 (usp5)
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114142258 (usp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
114142258
NCBI-ProteinID:
XP_027869238
LinkDB
All DBs
Position
3:complement(12413638..12427575)
Genome browser
AA seq
848 aa
AA seq
DB search
MADVGEVLMSVLSTIRVPKPGDRVHKDECALSFSSPESEGGIYVCMNTFLGFGSQYVGRH
HARTGQRAYLHITRTRKAKKEDENNSGSGHPPKKKPTRLAIGIEGGFDVEQELYEEDVKV
VILPDRQEVTSEDLGTMPDVVRERVSLSMSGIMAADSVSHTLQVQQWDGEVRQESKHAAN
LKQLDNGVKIPPSGWRCEVCDLQENIWMNLTDGKVLCGRRYFDGSGGNNHALLHFQETGY
PLAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLAHFGINMMTMEKTERTMTELEIAVNQ
RVGEWEVIQESGTTLKPLFGPGVTGMKNLGNSCYLNSVMQVLFTVPDFQSTYVSNIDKII
DEAPSDPTQDFKTQVAKLGYGLLSGEYSKPAPDPGDEIGASEPRGDQVGIAPRMFKALVG
RGHPEFSTNRQQDAQEFLLHFINMVERNCRSGPNPSEAFRFLVEEKIVCQQSQKAKYTQR
VDYIVQLPVPMDQAANTEELKEAERRREEGDSSAPTVRAQIPFSACMAALSEPEMLTDFW
SSAVQAKTSATKTTRFASFPDHLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDLSGLRATG
QQPGEELLPEVAPPPLMTPDVEVKGILGSHGNEDDDSLYSPLLSPVLDDSTVSQLCEMGF
PLEACRKAVYYTGNTGIDAAMNWIMSHMDDPDFSAPLVLPGSSSGPGTTPTESLSEEHLA
TIVSMGFSRDQATKALRATSNVLERAVDWIFSHLDDLDSMEVSEAGRSAAESEGGRDPPP
GPRVRDGPGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPKDLGYL
YFYRRVAD
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgttggagaggttttgatgtcagttttgtccacaattcgcgtcccaaagcct
ggggaccgtgtccacaaagacgaatgcgccctgtcattttcgtcaccggagagtgaagga
ggcatatacgtgtgcatgaacacttttctgggttttggcagtcagtacgtgggcagacat
catgctcggactggtcagagggcttacctgcacattacccggactagaaaggctaagaag
gaggatgaaaacaactctggctcaggacacccacctaagaaaaagcccactagactggct
atagggattgaaggaggttttgatgtggagcaggagctttacgaggaggacgtaaaggtg
gtcattttacctgacagacaggaagtgacctcagaggaccttggcacaatgccggatgtt
gttagagagcgggtgtctctgtctatgtcgggtatcatggcagcagactcggtgtctcac
accttacaagttcaacagtgggatggagaggtgagacaggagtcgaagcatgccgctaac
cttaaacagctggacaacggagtcaagatccctcccagtggctggcggtgtgaggtgtgt
gacctgcaggagaacatctggatgaacctcacagacggcaaagtgctgtgcggtcgtagg
tacttcgacggctccgggggcaacaaccacgccctcctccatttccaggagaccggatac
ccgctggctgtcaaactgggcacaatcactcctgatggtgctgatgtgtattcatacgat
gaagacgacatggtgctggactccaagttaccggagcatctagctcacttcggcatcaac
atgatgaccatggagaagactgagcggacaatgaccgagttggaaattgctgtaaaccag
cgagtgggggagtgggaggtcatccaggagtcggggacgaccctgaagcccctgtttgga
cccggtgtgacgggtatgaagaacctgggaaacagctgctacctcaactccgtcatgcaa
gtgctcttcaccgtccctgacttccagagcacatacgtttcaaacattgataagatcatt
gatgaagcaccaagtgacccaacccaggacttcaaaactcaagtagccaagctcggttac
ggcctgttgtcgggagaatactccaaacctgctccagatcccggagatgaaattggtgca
tctgaacccagaggcgaccaggttgggatagcaccgcggatgtttaaagcacttgttggg
cggggccacccagagttttctactaatcgacaacaggatgctcaggagtttttattgcac
ttcattaacatggtggagaggaactgtcgctctgggcccaacccatctgaagcctttagg
tttctggtggaggagaagatagtttgtcagcagtcacaaaaagccaagtacacacagcgg
gtagattacatagtacagctgcccgttcccatggaccaggctgctaacacagaggagctt
aaggaggcagagcgccgccgtgaggagggggactcatcagcgccgacagtgcgagcacaa
atccccttctcggcttgtatggcggcgctcagcgaaccagagatgctgacagacttctgg
agctcagctgtgcaagcaaaaacctctgctaccaaaacaactcggtttgcctctttcccc
gatcacctggttatacagattaagaagttcacctttggccttgactgggtgcctaagaaa
ctggatgtgagcatcgacgttccggacaccctggacctgagcggcctgcgtgccaccggc
cagcagccgggggaggagcttctacctgaggtggccccgcccccactcatgaccccagat
gtggaggtcaaaggtatcctgggttcgcatggcaacgaggacgacgactcgctctactcc
ccgctgctgtctccagtcctcgatgactccactgtgtcccagttatgtgaaatgggattt
ccactggaagcctgcaggaaagcagtctactacactgggaatactggaattgatgctgcc
atgaactggatcatgagccacatggacgatcctgacttttcggctccgcttgtgttgcca
ggcagtagttctggacctggaaccactcccacagagagcctctctgaggaacatctggca
acgatcgtctccatgggcttcagtcgagatcaggcaaccaaagcgctcagagcaacgagt
aacgtgctggagcgtgcggtggactggatcttctctcacctagacgacctggactccatg
gaggtgtccgaagccgggcgctcggctgcagagagcgagggtgggagggatcctccaccc
ggacctcgcgtcagagacggaccaggaaagtacgagttgtttgcattcatcagtcacatg
gggacgagcacgatgtgtggacactatgtctgccacatcaagaaggaccaacaatgggtc
atctttaacgatcagaaggtttgtgcttcagagaaacctcccaaagacctgggctacctt
tacttctaccgcagagtggccgactga
DBGET
integrated database retrieval system
