Xiphophorus couchianus (Monterrey platyfish): 114142347
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Entry
114142347 CDS
T05908
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114142347 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114142347 (prpf31)
Spliceosome [BR:
xco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114142347 (prpf31)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Exo84_C
Motif
Other DBs
NCBI-GeneID:
114142347
NCBI-ProteinID:
XP_027869384
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All DBs
Position
3:13971575..13978513
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AA seq
505 aa
AA seq
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MSLADELLADLEEAGDEGEDGLYPEEEEGDSDGERSQGRMVGALEDIPEEMEVDYSKAES
VASIAKLRNSKQFSDIMEKISEYIGKQRKNSDVSGPVEADPEYRLIVAANNLTVEIDNEL
NIIHKFTRDKYSKRFPELESLVPDSLDYIRTVKELGNNLEKCKNNETLQQILTNATIMVV
SVTASTTQGSLLTEDELKQLEEACDMALELNQSKHGIYEYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGFIYHCDVVQSLPPDL
RRKAARLVAAKCTLASRVDSFHESSDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNEATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctctagctgacgagctcctggctgatctggaggaagccggagatgagggagaagat
ggattgtatccggaagaagaggagggggatagcgatggagagaggagtcagggaaggatg
gtgggagccctggaagatattccagaggagatggaggtggattacagtaaagctgagagc
gtggcgtccatcgctaagctccgcaatagcaaacagttttcagacattatggagaaaatc
tcagaatatattggaaagcagcgcaaaaactcagacgtttcaggtccagttgaggccgat
ccagaatacaggctgattgtagcagccaataatctcaccgtggagatcgacaacgagctc
aacataattcataaatttactagagacaaatattccaagaggtttccagagctcgagtct
ttggtgccagattctctggattacatccgcacagtcaaggaactgggaaacaatctggag
aaatgtaagaacaatgagacgctgcagcaaatcctgaccaatgctaccatcatggtggtc
agcgtcacagcttcgaccacacagggatcgttgctgactgaggatgaactgaagcagctt
gaagaggcgtgtgacatggcgctagagctgaaccaatccaaacacgggatatacgagtac
gtggagtccagaatgtccttcatagccccgaacctgtccatcatcgtgggagcatcaact
gctgccaagattatgggaatcgctggcggtctcactaacctttcaaagatgccggcctgt
aacctgatgctgctgggggctcagaggagaacgctgtccggcttcagcagcacgtctctg
cttccacacacaggattcatctaccactgtgacgtcgtgcagtcgctgccgcctgacctg
aggaggaaggcggcccgtctggtggcagcaaaatgcaccctggcttcacgagtggacagt
tttcatgagagctcagatggaaaggttggctatgatctaaaagaagagatcgagaggaag
tttgataaatggcaggagccgccgccagtgaagcaggtcaaacctctgccggcgccgctg
gatggacagaggaagaagagaggagggagaaggtatcgaaagatgaaggagcgtctcggg
ctgacggagattaggaaacatgccaacagaatgacctttgcagagattgaagatgatgct
tatcaggaggatctgggattcagtctgggtcagctgggaaaaagcggcagcggcagagtc
agacaggctcaggtcaacgaggccaccaaggcgaggatctccaaatccctgcagaggacg
ctgcagaagcagagcatgacatatgggggaaagtccacagtcagagatcgctcgtcggga
accagctccagtgtcgcttttactccccttcagggcctggagatcgtaaaccctcaggct
gcagagaagaaggtggctgaagccaaccagaaatatttctccaacatggcagagttcctc
aaagtgaaaaaggaatga
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