Xiphophorus couchianus (Monterrey platyfish): 114142353
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Entry
114142353 CDS
T05908
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00900
Terpenoid backbone biosynthesis
xco01100
Metabolic pathways
Module
xco_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
114142353 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
xco01006
]
114142353 (fdps)
Enzymes [BR:
xco01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
114142353 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
114142353 (fdps)
Prenyltransferases [BR:
xco01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
114142353 (fdps)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
CBF
Motif
Other DBs
NCBI-GeneID:
114142353
NCBI-ProteinID:
XP_027869393
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All DBs
Position
3:complement(14718941..14724285)
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AA seq
398 aa
AA seq
DB search
MRRLLLSCAVNAPKTFRAVWLVASTFRFKSPAFMLSASCLQADTVCNGTHSKKALLSDPQ
LFDAKFEELVTELTERDFQDPGLADALNRLREILDYNVPGGKKNRGLSVIGSLRELLPPS
QLSQDTVQKALMVGWCIEMLQAFFLMADDIMDASVTRRGQPCWYKRNGIGLDAINDSFLV
EASIYRLLRRQCRGQPYYVHLLELFNETTFQTELGQALDLMTAPPGHIDLNRFTMERYKA
IVKYKTAFYSFYLPVASAMYMAGIDSEEEHSNAKHILLEMGEFFQIQDDYLDCYGDPAVT
GKIGTDIQDNKCSWLVVKALEVMSPEQRSVLEACYGRKDEASVAKVKELYNALLMPKLYH
TYEEESYQRLQKLIARHAQNLPHSIFLNFAKKIYKRNK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcctgctgctgagctgtgcagttaatgcacctaaaacctttcgggccgtgtgg
ttagttgcgtctacgttcagatttaaaagcccggcatttatgctgtctgcctcctgtttg
caggcggacaccgtttgcaatgggacacacagcaaaaaggcgttgctgtcggaccctcag
ctgtttgatgccaagttcgaggagctggtgacagagctgaccgagagggacttccaggat
cccgggctggcggacgccttgaataggctgagagagattttagattacaatgttcctgga
ggcaagaagaacagaggtttgtctgtaatcggctccctgagagagcttcttccgccgtcc
cagcttagtcaggatactgtgcagaaagctctgatggtcggctggtgcatagagatgctt
caagcatttttcctcatggcggatgacatcatggatgcatctgttacccggagaggacaa
ccctgctggtacaagaggaatggaataggcctggatgcaataaatgactcctttcttgtg
gaggcatcaatatatagactccttcgaagacaatgcaggggtcagccctattacgtccat
ttactggagctttttaatgagaccaccttccagactgaacttggtcaggcactggacctc
atgacggctccacctggccacattgacctgaacaggtttaccatggaaaggtataaagca
attgtgaaatacaagactgccttttattcgttttatctcccagtggcctctgcaatgtac
atggcagggattgacagcgaagaggaacacagtaatgccaagcacattttactggagatg
ggagagtttttccaaatacaggatgactacttggattgttatggcgacccagctgtgact
ggaaagattgggacagacatccaggacaacaaatgcagttggttggtggtgaaagctcta
gaagtgatgagtcctgagcagagatcagttctggaggcttgctacgggcgcaaggatgaa
gccagcgtggcgaaggtcaaagagctctacaacgccctactaatgccaaaactgtatcac
acatatgaagaggagagctaccagcggctgcagaaactcatcgctcgacatgctcagaac
cttcctcactcaatattcctcaacttcgccaagaaaatttacaagaggaacaagtga
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