Xiphophorus couchianus (Monterrey platyfish): 114142470
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Entry
114142470 CDS
T05908
Symbol
gtf2f2
Name
(RefSeq) general transcription factor IIF subunit 2 isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114142470 (gtf2f2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114142470 (gtf2f2)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
114142470 (gtf2f2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
LYRM_2
Motif
Other DBs
NCBI-GeneID:
114142470
NCBI-ProteinID:
XP_027869572
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All DBs
Position
4:23190641..23196437
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AA seq
268 aa
AA seq
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MSEKGEVDLTGAKQNTGVWLVKVPKYLSQQWAKATGRGEVGKIRICKKGNQGKPEVSFTL
NEELTTIEGIEDKTVSAPREHPFTMQSVGGQMLAVFTETSSGQSEERSDGSSSGSGTGPD
KIALEGVVVQRAECRPAVSESYMKLKRLQIEESSKPARLSQQLLKPVTTNYKPVANHDYN
REYERKKKEEGKRARSDKQQVLDMLFSAFEKHQYYNIKDLVDITKQPVTYLKEILRDIGI
YNVKGTHKNTWELKPEYRHYQAEEKTDE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaaggagaagtagatttaacaggtgccaagcagaatactggtgtttggctc
gtaaaggtgccgaagtacctctctcagcaatgggcaaaagctacaggaagaggcgaggtc
gggaaaatcagaatttgcaaaaaaggaaaccaaggaaaaccagaggtgtctttcacttta
aatgaagagctgactaccatcgaaggcatcgaggacaagacggtgtctgcacctcgcgaa
catcctttcaccatgcagtccgtggggggtcagatgcttgcggtcttcacggagacttca
tccggccagtcagaagaaagatctgatggcagcagctcaggttcggggacaggtccagat
aaaatagccttggagggagtggtggtgcagagagcagaatgcagacctgctgttagtgaa
agctacatgaaattaaagcggctacaaattgaagagtcttccaaaccagcgaggttgtca
cagcagttgttgaagcctgtcaccaccaactacaaacctgtagccaaccacgactacaat
cgtgaatacgagcggaaaaagaaagaggaaggcaagagagcgagatctgacaaacagcag
gtgctggacatgttgttttctgcgtttgagaagcaccagtactacaacatcaaagacctg
gtagacatcaccaaacagcctgtgacatacctgaaggaaatcttgcgtgacattggcatc
tacaatgtaaagggaacacacaagaacacctgggaactcaagccggagtacagacattac
caggcagaggaaaaaactgatgaatag
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