Xiphophorus couchianus (Monterrey platyfish): 114142478
Help
Entry
114142478 CDS
T05908
Name
(RefSeq) synaptic vesicle glycoprotein 2B-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114142478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114142478
Transporters [BR:
xco02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
114142478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LD_SV2
Sugar_tr
MFS_1
Pentapeptide_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
114142478
NCBI-ProteinID:
XP_027869579
LinkDB
All DBs
Position
4:29052985..29089012
Genome browser
AA seq
697 aa
AA seq
DB search
MDDPYHNNVNQQMTEGGEYTYTQGGGGQDGYPYQTDYPQQDEDAASDATEGADEDDQMYE
GEYQGIPHPDEIKEARRAARLEAKRKARLTAQQQQQQQEEEESLPEQYETIMEDCGHGRF
QWTLFFVLGLALMADGVDGFVVGFVLPSAEKDMCISNADKGLLGLLVYVSMMVGALVWGG
LCDKMGRRKCLIYVLTIDLVFSFLSCFAQGYGFFLFLRFCSGFGIGGSIPIVYTYFTEFL
QMDKRGEHLSWLCMFWMLGGLYASFTAWGIIPHYGWGFAIGTQFQIHSWRLFMFVCLFPA
LAALIGVVFMPESPRFLLENARHDEAWMILRQVHDTNWKAKGEPERVFTVTNIKTPQTQE
DEFIEIQSDTGTAFQRWTVRKMTMLQQVMANVMSLSAPELRLQGLFLVIVWFCMAFSYHG
LGVWFPDMIKYMQYEEYESKVKVFHRERVERFHFNFSLVNQVHREGEYIHDKFANIEIKS
VKFEDSLFENCYFEDIKSTNTFFENCTIKNTVFYNTDLWQEKFKNCQMENTTFLHPKKGC
HLNFLEENDIVIYLVSFLGSLAVLPGNIISALFMDKIGRIRIIGGSMLASSACTFLLLLS
FSQGAVICWQCLFYAVSVAAWNGLEVISVELYPSSKRGTAFGILNGICKFAAIVASFIFA
AFVGITKIIPIFLAFAALVCGGLVALRLPETREKILS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggatgacccctaccacaacaatgtgaaccagcagatgactgagggcggagagtacacc
tacactcaaggtggaggaggtcaggacggctacccttaccagacggactatccccaacag
gatgaggacgccgccagcgacgccaccgagggggccgatgaggacgatcagatgtacgag
ggggagtaccagggcatcccccaccccgacgagatcaaggaggcgcggcgggccgcccgg
ttggaggccaagaggaaagcccgtctgaccgcgcagcagcagcagcagcagcaggaggag
gaggagagcctgccggagcagtacgagaccatcatggaggactgtggccacggccgcttc
cagtggacgctcttcttcgtgctgggactggcgctgatggcggacggcgtggacggcttc
gtggtgggcttcgtcttgcccagtgctgaaaaggacatgtgcatatccaacgcagacaaa
ggactcttgggcctgcttgtgtatgtgtccatgatggtgggtgccttggtgtggggcggt
ctgtgtgacaagatggggaggaggaagtgtctcatctacgttctgaccatcgacctggtc
ttctccttcctgtcctgcttcgctcaaggatacggcttcttcctcttcctgaggttctgc
tccggctttggaattgggggatccatcccgatcgtgtacacctacttcaccgagttcctg
cagatggacaagcgtggagaacatttgagttggctctgcatgttctggatgctgggaggc
ctgtacgcctccttcaccgcctggggaatcatccctcactatggctggggcttcgccatt
ggaacccagtttcagatacacagctggagactgtttatgtttgtgtgtctcttcccggca
ctggctgcactcatcggagtcgtgttcatgcccgagagtccacgtttcctgctggagaat
gctaggcacgatgaggcatggatgatcttgcgacaggttcatgacaccaactggaaggcc
aagggggagccggagcgagtcttcaccgtgacgaatattaaaactccgcaaacccaggag
gacgaattcatagagattcagagtgacactggaaccgcctttcagcgctggacggttcga
aaaatgaccatgctgcagcaggtgatggccaatgtgatgtctttatctgctccagagctc
aggctgcagggccttttcctggtcatcgtgtggttctgcatggctttcagctaccacgga
ctgggagtgtggttccctgacatgataaagtacatgcagtacgaggagtacgagtctaag
gtcaaagtgtttcatcgggaacgtgtggagcgattccactttaatttttccctcgtcaat
caagtccaccgtgagggagagtacatccatgacaaatttgcaaacattgagattaaatcc
gtcaagtttgaggattcgctcttcgagaactgctactttgaggacatcaagtcaaccaac
acattcttcgagaactgcacgatcaaaaacacggtcttttacaacacagacctgtggcag
gaaaagttcaaaaactgtcaaatggaaaacaccaccttcctccatccaaagaaaggctgt
catctaaacttcctggaggagaacgacatagtaatctacctggtcagcttcctgggaagc
ttggctgtgctgcctggcaacatcatctcggcacttttcatggacaagataggaaggatc
cgaataataggcggttctatgctggcgtcgtcagcctgtactttcctgctgctcttgagc
ttcagtcaaggagcagtaatctgttggcagtgtctcttttatgctgtcagtgtggcagcc
tggaatgggctggaagtcatttctgtggagctctacccctcttctaaaagagggacagcg
ttcggcatcctgaacgggatctgtaagttcgcagccatcgttgccagcttcatctttgca
gccttcgtcggcatcacaaaaatcatccccatcttcctggccttcgccgccctcgtctgt
ggaggcctggtggccctgaggctgcctgaaacgagggagaaaatcctctcttga
DBGET
integrated database retrieval system
