KEGG   Xiphophorus couchianus (Monterrey platyfish): 114142487
Entry
114142487         CDS       T05908                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27 isoform X1
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114142487 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xco03041]
    114142487 (bcas2)
   03400 DNA repair and recombination proteins [BR:xco03400]
    114142487 (bcas2)
Spliceosome [BR:xco03041]
 Complex B
  Other components
   Prp19 complex
    114142487 (bcas2)
 Complex C
   Prp19-CDC5 complex
    114142487 (bcas2)
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    114142487 (bcas2)
SSDB
Motif
Pfam: BCAS2 THOC7 Sterile BRISC_FAM175B_helical
Other DBs
NCBI-GeneID: 114142487
NCBI-ProteinID: XP_027869599
UniProt: A0A3B5KXN5
LinkDB
Position
1:6253241..6877719
AA seq 225 aa
MAGTASVAGEVFVDALPYFDQGYDAPGVREAAAALVEEETRRYRPTKNYLSYLPTPDFAA
FETEIMRNEFERLAARQPMELLSMKRYELPAPTSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQYGTNAWKVYNGNLAFMIEMAQKELHKFRKQIQDLNWQRKNDQLAAGAKLRE
LESNWVSLVSKNYEIERAIVQLENEVGQLRQQQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggccggaacggcttcagtagcaggtgaagtttttgtggacgctttgccgtactttgac
cagggttacgatgctccaggcgtcagagaagcggctgcagcgctggttgaggaagagaca
agaagatatcggcctacgaagaactacctgagctacctgcctacgcctgacttcgcagct
tttgagacagaaattatgaggaacgaatttgaacggttagcagctcggcagcccatggag
ctcctgagcatgaagagatatgagcttccggcgcccacatcaggacagaagaacgacata
acggcgtggcaggagtgtgtgaacaactctatggcccagctggagcaccaggcagtccgc
atcgagaacctggagctcatgtcgcagtacggaaccaacgcatggaaagtctacaacggc
aacttggccttcatgattgagatggctcagaaggagcttcacaagttcaggaagcaaatt
caagatttgaactggcagcgtaagaacgaccagttggcagctggagccaaactacgcgag
ctagagtccaactgggtgtcactggtcagtaagaactacgaaatcgagcgggccatcgtc
cagttggagaacgaagtcggtcagctccgacagcagcagggggacgagaacaaggagaat
atcagacaggacttttag

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