Xiphophorus couchianus (Monterrey platyfish): 114142636
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Entry
114142636 CDS
T05908
Name
(RefSeq) excitatory amino acid transporter 3-like isoform X1
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
114142636
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114142636
Transporters [BR:
xco02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
114142636
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Gene cluster
GFIT
Motif
Pfam:
SDF
DUF2427
Motif
Other DBs
NCBI-GeneID:
114142636
NCBI-ProteinID:
XP_027869835
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Position
1:complement(8285566..8318506)
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AA seq
498 aa
AA seq
DB search
MKERIFQAANLISVALGLVLGFLLRLQVPLTPHQIHWIQTPGEIFLNMLQIFAVPLIVTS
VIAGVTELSNKMSKKMAIFTGTYICGTTFIAISIGMTLVLMAKPGEGQDISSTESPDVPA
FSIHLVLQDLLRNMIPESFLQAFYEQYKTEIVLIKREESVRNISQNDTEIRLIGSYVAGP
NMIGLIVWSFVIGIMLNKVESKANVTVQVIQCLNEAIKITFNWILWYLPVGVLFLVTHQV
LEVQDWGAIIKLGKLSGLVLLGYLIHALFVLPGLYFIILRVNPYVVFKKTSRALLTAFVI
ASSSATLPITLQCCEENVKVNVRLCRLMLPIATTINKNGTALYEVIAVVFITQINNIVLD
VGQIITIGLTVSIISFGTAGIPVTGAMITILILTSAGLPADDAYVLLVVEWLLDHFGTSV
NVLGDCFGVAVINHLCYDDLMKSNNKSIARTRSIKDIEMDLSFLDSDEEFISSTPSSHSR
SISPKRGDHLRRVVTPPS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacgtatatttcaggcagctaacctgatttcagttgccttagggttggtcctt
ggatttctgctgaggcttcaagttcctctaactccacatcaaattcactggatccaaacg
ccaggggaaatatttctaaacatgcttcagatatttgctgtccccctcattgtgacaagc
gtgatcgcaggagtaactgaattaagcaacaaaatgtcaaagaaaatggccatcttcact
ggaacctacatctgtggcactaccttcattgccataagtattgggatgactctggtgcta
atggctaagcctggtgaggggcaagacatttcatccactgaatctccggatgtcccagcc
ttctccattcatttggtcctacaggaccttttaaggaacatgattccagagagctttctt
caggctttctatgagcagtacaagactgagattgttcttattaaaagagaagaatctgtc
cgcaacattagtcagaatgacacagagataagactgataggcagttatgttgctggaccc
aacatgataggactgatcgtctggtcttttgtcatcggcatcatgttaaacaaggtggaa
agcaaggccaatgtcactgtgcaggtcattcaatgcctcaacgaagcaataaaaatcaca
tttaactggatcctgtggtacttgccagtaggagtgttgttcctggttacacaccaggtg
ctggaggttcaggactggggcgccatcattaaacttggaaagctttcagggctggttctt
ctggggtatttaatccatgccctttttgttcttcctgggctttatttcataatcctcaga
gtgaacccttatgtcgtcttcaagaagacctcaagggccttgctgacagcatttgttatt
gcgtccagctccgccactctgcccatcaccctccaatgctgtgaagagaacgtgaaggtc
aatgtgagactctgccgcctcatgctgcccatcgccactaccatcaacaagaatgggacc
gcgctctacgaagtgatcgctgttgtctttattacccagataaataacatcgtgctggat
gtaggccagataatcaccattggcttgactgtttccatcatcagctttggaactgcaggg
atcccagtaacgggagctatgatcactatcctgattctgacatctgcgggactgcctgca
gatgatgcctacgttctgcttgtggtggaatggcttctagaccatttcggcacttcggtg
aatgttctgggagactgctttggtgtggctgtcatcaatcatctgtgctacgatgacctg
atgaagtccaacaataaaagcattgcaaggactcgttccatcaaggacatcgaaatggac
ttatcctttttggattctgatgaagagttcatttcctccaccccttcatcccactcaaga
tccatttcacctaagagaggggatcatctcagaagagtggtaacgccaccaagctga
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