Xiphophorus couchianus (Monterrey platyfish): 114142782
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Entry
114142782 CDS
T05908
Symbol
tmc3
Name
(RefSeq) transmembrane channel-like protein 3 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114142782 (tmc3)
03037 Cilium and associated proteins [BR:
xco03037
]
114142782 (tmc3)
Transporters [BR:
xco02000
]
Other transporters
Pores ion channels [TC:
1
]
114142782 (tmc3)
Cilium and associated proteins [BR:
xco03037
]
Other cilia and associated proteins
Stereociliary proteins
114142782 (tmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
114142782
NCBI-ProteinID:
XP_027870042
LinkDB
All DBs
Position
4:complement(36357398..36442673)
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AA seq
1157 aa
AA seq
DB search
MSSASEPVVGSSRSLLAAKRHRTVRKNSRRIYSAYRDHQQGSSDEEGGDDKEVDSNDPEE
MFQNIQYQKEIIANIRSRPWPMRRKLKVLKQAREIVLKYEGQLTRTRGYQTAGADLLKKL
YRVLYNIVVTFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGSFVVLPELL
AGAPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGSVRKIGSAGYRLPLA
YFLVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAECKG
AAIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQ
EKPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYS
LIIALLDKVNSMSSAPHVSSSNWTNTSSTISSLSAQVSRISVSEHHNSTMATISTAINFI
HNRSSLITASNQTIPFEKNARSQQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFIRGL
VVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNVLKLIGL
MYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRPSEHCGPFS
GQEKIYDIISDTVASDFPLWFSKVMSYVTSPVVVLPAVLLLFMLIYYLQAIARSLKFTNN
QLRIQLQTERTEDKKKVFQMAAARLQVPEASADKNPDQQESDIPNQEASIHTSSPQQNGS
ITNVQSPINRSNSIRTISQSASGADLNEGCVSGSVRSPAVIILPKHQVEHLPNSRPQHFI
GGRSGSCRSKSCHHMAYNPPSDLSNAIHTDPLYRKTIRSLHPVEAAGIIAAQNYGGHCGP
TTRYVIVNEHRPRKKLLCSTTRIPRHYLMEEPREILELYPRNIKHYTPRTIHQQHPPRSH
TSQQLRKEEEETGKDRKRTSLGKSLRPCSLPDHHQQAHFYIGERLDSFRESQRARYEMQE
DDEEEAGKEGIDWGDFNLPSPSQTSVKEKESSHTQRQPVHSPRRQYQSPTRTRHMGSQLK
PKLRGQLETHLTESDSASIASSSDQQNSSTDQYIHVIHSKERHLGSDVRQEKMSKKKSKT
NFDLNYTESNDLICSNV
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagcatctgaacctgtggttggaagcagtagatccttgcttgctgccaaaaga
cataggactgtacggaagaactcaagaaggatttattctgcttaccgagaccaccagcag
ggctcatcggatgaagaaggtggagatgataaggaagtggacagcaatgaccctgaagaa
atgttccagaacattcagtaccaaaaagagatcatcgccaacattcgctccagaccctgg
ccaatgagacgcaagctcaaagttttaaagcaggctcgagagattgtcctaaagtatgaa
ggccagctgacgagaacaagaggttatcagaccgccggagctgatctgctgaaaaaactt
taccgtgtgctttacaacattgttgttacattcattccgtgggaagtgaggatcaaaaaa
attgaaagtcactttggatcaggcgtggcctcctattttatctttcttcgctggttgttt
gggataaacatcgtcctcaccatcatgacaggatcttttgtggtcctaccagagctgttg
gctggagctccatttggaacaacaagaagtaaaactatccccaaagagcatcttgcttca
gcccaagacttggacaccatctggtctcttgggggttacctgcagtactctgttttattc
tatggttattatggcagcgtgaggaagattggcagtgctggctaccggctgccacttgca
tacttcctggttgggatggctgtttttgcctacagtttcatcatcctgttacgcaaaatg
gcaaagaactctcgtctgagtctggccagtgcttctgatgaaaacttcacattctgttgg
agagttttctgtgcctgggattacctgattggtaacccggaagctgcagagtgcaaaggg
gctgcaatcgttaacaacatcagggaagcaattgttgaagaacaagaaaagaagaaggat
acaagcctggcagttctcatcagtctgcgtattttagccaatatcctggttttgctgtca
ctagctgggagcatctacatcatctattttgttgtagaccgatcccagaaactggagcag
gaaaagccagagctgacgttgtgggagaagaatgaggtgagtgtggtggtctcgctcatc
actatgattgccccttctgcttttgagctggttgcacagctggagatgtatcacccaaga
acctccctgagattccagctggccagagtccttgttctatatctgggaaacctctacagc
ctcattattgccctcttggataaagtcaacagtatgagctctgctcctcatgtgagttca
agtaactggactaacaccagctccaccatatccagtctctctgcccaagtatcaaggatc
tctgtgtctgagcatcacaacagtaccatggcaaccatcagcacagcaatcaacttcatc
cacaacaggagcagcttgattactgcatccaaccagacaattccttttgagaaaaatgca
cgatctcaacaggaccagtgctgggagacctatgttggacaggagatgttgaagctttct
attattgacatgatcttcacagtggccagcatcttgctcattgactttatcaggggtctg
gtggttcggtatctgagtgactgctgctgctgggacttagaaagcaagtttcctgaatat
ggagaatttaaaatagctgaaaatgtcctacacttgatctacaaccaaggaatgatctgg
atgggagcctttttctctccatgcctccctgcctttaatgtgttgaaactgattggtctc
atgtatctaaggagctgggctgtcctcacttgtaatgttcctcatcagcaggttttccgg
gcttccagatcaaataatttctacttggctatgctacttttcatgctgttcctgtgtatg
ctccccaccatctttgccattgtgcgatatagaccatcggaacactgtggaccattcagt
ggccaggagaagatttatgacatcatctcagatacagtggcatcagacttcccactttgg
ttcagtaaagtgatgagttatgtcaccagccctgttgtggtgctgccagcagtgctactg
ctatttatgctgatatattatcttcaagcaattgccagatccctaaaatttactaacaac
caactgaggattcagctccagactgagcggacagaagacaagaaaaaagtatttcagatg
gctgcagcaaggctgcaagtcccagaggcctcagctgacaaaaacccagatcagcaggaa
agtgacatcccaaaccaggaagcttccatacacacctcatctccccagcaaaatggcagc
attacaaacgttcagtctcctattaatcgtagtaacagcatccgtaccatcagccaatca
gcttctggagctgacctgaatgaaggatgtgtgtctggatctgtcagaagtccagctgtg
atcatactacccaaacaccaggtggaacacttaccgaacagtagacctcaacatttcatt
ggtggccgaagtggttcctgcagatccaagtcttgtcaccacatggcatataatccgcca
tctgacctttctaatgcaatccacactgaccccttgtacaggaaaaccattcgttctcta
caccctgttgaggctgctggaatcattgctgcacaaaattatggggggcactgtggtcct
actacccgctatgtgattgttaatgagcacaggccccgtaagaagctactgtgctcaacc
acacgaatcccaaggcactatctcatggaggagcccagagagatcctagagctatacccg
cgcaacataaaacactacacacctcgcaccattcaccaacaacatcccccccgctcccac
acatcacagcagctcaggaaagaggaggaagaaactggaaaagacaggaaaaggacttct
ctaggcaaaagccttcggccttgttccttgcctgaccaccaccaacaagcgcacttctat
attggtgaaaggttagatagttttagagaaagtcagagagcaaggtatgagatgcaagaa
gatgatgaagaggaagctggtaaagaaggaattgactggggagatttcaatttaccgtct
ccatctcaaaccagtgtaaaagaaaaagaatcttctcacacacaaaggcaacctgtccat
tctccaaggagacaatatcagtcccccaccagaaccagacacatggggtctcaattaaag
cccaagttaaggggtcagcttgaaactcatttgactgaatctgactcggcctccatagca
tccagcagtgaccaacaaaacagcagcactgatcaatatattcatgtcatccacagcaaa
gagcgccatcttggatctgatgtcaggcaagaaaagatgtccaaaaagaaatccaagaca
aactttgatctaaactacacagaatcaaatgacttgatctgttccaatgtgtaa
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integrated database retrieval system
