Xiphophorus couchianus (Monterrey platyfish): 114142847
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Entry
114142847 CDS
T05908
Symbol
cgnl1
Name
(RefSeq) cingulin-like protein 1 isoform X1
KO
K21110
cingulin-like protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114142847 (cgnl1)
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Gene cluster
GFIT
Motif
Pfam:
Myosin_tail_1
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Motif
Other DBs
NCBI-GeneID:
114142847
NCBI-ProteinID:
XP_027870154
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Position
4:16428712..16473487
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AA seq
1296 aa
AA seq
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MESYRATSSGSQRGYTQPSRISRPSSNGAGSYGLSIRVQGIDGHPYVVLNNQDRGHHPDG
NGYPDTEGSFIEHFQEYDFRGDKKAGSSDPFMEYRTQKMRHFSGPQNGLPESQAKKPSTL
LNFQRHPELLQPYDPRSNSLNLEGFHSLPSRPAPQADTRIEYQNPYPKSEVRVPSRFRSS
SLDRHLDRTQEENRQPPQTDLNTPQTKSPSLPSAQVPQPQSRAPTQPAQPAQPQIKPYLT
SLNPSQPKPTTKIPPVPAAQPQPSPVSSPSSDQRKASPTSTRSANSSLERTHHDPDVLPL
LRTDSGEPAQSCHSSLSSTSKSLIDEQMEALYTDAINRHENRRYIPFQPGSGRDIDTGSI
PGVDELIEKFDGKDDGLQRRGRAGRRNRINPEDRKRSRSVDSAFGSRSDSSFMDEFGQSL
GTSKERVLRPSQLRLQRTASGQDPGSTAVDGPSSRAISAPGSPQSSISKYTGSLRGYTKL
QSRPAIPSFKSSEETPSSVGKVSTTSLSKLPPTADSKTSTGADVQATPDLLKGQQELSQQ
THEETAKQILFSYLKEGSNDNDDVTNRKVNLVFEKIQTLKSRATASAQSDNKSVDLAAQT
KALQEQNAELEKEIIELKRQLEEQMKRTSQADRRAAAGLKELQQELQRSLDECRQLKEKL
AKTEAELNSSVEELFQVKMEREQHQTEIRDLQDQLSEMHDELDAAKRAAADGEKDVLMAD
MMQLKVEMQEVVMAKEEQEELLRRRERELAALKGALKDEVAAHDQEVDKMKEQYEKEISR
LQMSLEEAKQNSAAVVREKAEVEAAKGQAEGQAGRLNQELERLRRRTNELENEVAKLNRI
IDEAKLLESRLGDKAGRLEREKRQLEESLAEIREQEEEMSRANQMLNIRLEDVQKNLAKL
DFENKELEDRLQEEKSQKEQFKNMKNNIEDERRLLDRTVEKLQREMSDIVEASQSSTREL
QEQIDIYKEKNRRELAELQRLLKEKGQELEKLVLTTRTLQEKLSLREDELRRCKTERDEA
VLKEQTLEKNVHDLEMEAEKNKQTKDDKSRQMKLMENRMAQLELDLEEERQSGDQLMDRI
DRGREQVEQMRNELLQERSSRQDLECDKLALERQNKDLKSRVAHLEGSHQSNKGSLVNEL
EARVQELEEKLEEEEREKSNLSLANRRLERRVKEMMMQIEEEHHTMQDQKDQLNLRLKAL
KRQMDEAEETIDRLEHNKKKLHRELDEQQEANEQLNSQLKALRSEMRRKNTSAPLLNNLD
DDDDDDDVSTDGEMYFSSSGYKRSSSQENSLSGFGV
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctacagagcgactagcagcgggtcgcagcgcggatacacgcagccatcccgt
atttccaggcccagtagtaatggagccggctcttatggcctcagcattcgtgtccagggt
atagatggacatccctatgtggtgctgaacaaccaggacaggggtcaccaccctgacggc
aacggctacccagacacagaaggctcttttattgagcatttccaggagtatgatttcaga
ggggataagaaagctggatccagcgaccccttcatggagtacaggacacagaagatgagg
catttctccgggcctcagaatgggcttcctgaatcgcaggctaagaaaccgtccacactt
ctgaactttcagaggcaccctgagctcctgcagccgtacgatccccggtccaactcccta
aacctcgaaggcttccacagcctcccgtccaggcctgcgccacaagccgacaccaggata
gaataccagaacccctaccccaaatctgaagtacgagttccctcccgtttcaggtcctca
agccttgatcgtcacctagatcgcacacaggaggagaacaggcagcctcctcaaacggac
ctcaacaccccccaaacgaagtctccatcattaccttcagcccaggtgcctcagcctcaa
agcagagcgccgacccagccagcacagccagcccagcctcagattaaaccgtacctcacc
agtctgaatccatctcagcccaaaccgaccactaaaattcccccagtaccggcagcgcag
cctcagccgtctccggtgtcaagtccatcaagcgaccagaggaaagcgtctcctacttcc
actcgcagtgccaactccagtctggagcgcacccaccacgaccccgacgtccttccccta
ctccggaccgactccggcgagcccgctcagtcctgccactcctccttatcgtccaccagt
aagtctctgatagatgaacagatggaggctctttacacggacgccataaaccgccacgag
aatcgccgttacatccccttccagcccggttcaggcagagacatagacacagggtccatc
cctggcgttgatgagctaattgagaagtttgatggcaaggatgacggccttcagcggagg
ggcagggcggggcgcagaaacaggatcaacccggaggacaggaagcgatcgcgcagcgtg
gacagcgcctttgggtcaaggtctgactctagcttcatggacgagtttggtcaatctcta
ggcacgtcaaaggagcgcgtcctacggccatcgcagttgcggctgcagaggacggccagc
ggtcaggaccccgggtctacggctgtagacgggccttcatcccgggccattagtgcgcca
ggatccccccagagctccatctccaaatacactggctccctccggggttacacaaagctg
cagtcacgccctgccataccgtccttcaagagcagtgaagaaactccttcttctgtcgga
aaagtctcaacaacgtccctgtccaaactcccgcccaccgctgacagtaagaccagcacc
ggggcagacgtccaggccacgccagatctcctgaaaggtcagcaggagctttcacaacaa
acacacgaggagacagccaaacagattttgttcagctacctcaaagaaggaagcaacgat
aatgacgacgtgacgaataggaaggtgaacttggtttttgagaaaatacagacgctgaag
tctagggccacagccagcgcacaaagcgacaacaaatcggtggacctggctgcacagacc
aaagctctgcaggagcaaaacgctgaactggaaaaagagattattgagctgaagagacag
ctggaggaacaaatgaagcggacgagtcaggcggacaggcgggcggcggcgggcctgaag
gagctgcagcaggagctgcagcggagtctggatgagtgcaggcagctgaaggagaaactg
gctaaaaccgaggctgagctcaactcctcggtggaagagcttttccaggtgaagatggag
cgggagcagcaccagacggagatcagggaccttcaggaccagctgtcagagatgcacgat
gagctggacgccgccaagagggccgccgctgacggagagaaagacgtcctcatggcggac
atgatgcagctgaaggtggagatgcaggaagtggtcatggccaaagaggagcaggaagaa
ctgttgaggaggcgagaaagggaactggcagccctcaaaggagctttgaaggacgaagtg
gccgctcatgatcaggaggtggacaagatgaaggagcagtacgagaaggaaataagcagg
ctgcagatgtctttggaggaggccaagcagaacagcgcagcagtggtccgagagaaggct
gaagtggaggcagccaaaggacaggcggagggccaagccgggcgactcaaccaggagctc
gagcgactgcgcaggcggacgaatgagctggaaaatgaggtggctaaactcaacaggatt
atcgacgaggccaaactgctggagagcagactgggagacaaagctggccgcctagagaga
gagaaaaggcagttggaagagtctctggctgagatcagggagcaggaggaggagatgtct
cgcgctaaccaaatgttgaacatccgactggaagatgtgcagaagaacctggccaaacta
gactttgagaacaaggagctggaggacaggctacaggaggaaaagtctcagaaggagcaa
tttaaaaacatgaagaacaacattgaagatgagagacgtctgctggaccggacggtggaa
aaactgcagagggagatgagcgatatcgttgaggcgtctcagtcgtccactcgcgagctg
caggagcagatcgatatttataaggagaagaaccggcgggagctggcagagctgcagcgg
ctcctaaaggagaaaggacaggagctggagaagttggtgctgaccaccagaactctgcaa
gagaagttgtcgctgcgggaggacgagctgcgacgttgtaagacggaaagagacgaagct
gttctcaaggagcagacgctggagaaaaacgttcatgacctggagatggaggctgagaaa
aacaagcagaccaaggatgacaaatccagacagatgaaactgatggagaacaggatggct
cagctggagctggacctggaggaggagcgtcaaagtggagaccagctgatggacaggata
gaccgaggaagagagcaggtggagcagatgaggaatgaactcctgcaggagaggtctagc
agacaggacctggagtgtgacaagttggctctggagagacagaataaagatctgaagtcc
agagtggctcatctcgaaggctctcaccagtccaacaagggcagcttggtgaacgagctg
gaggctcgagtgcaagagctggaggagaagctggaggaagaggagcgggagaagtccaac
ctgtcgctggccaaccgcaggctggagaggagagtgaaagagatgatgatgcaaatcgaa
gaggaacatcacacgatgcaagatcagaaggaccaactgaatctgcgtctgaaggctttg
aagcggcagatggatgaggcggaggagacgatcgaccggctggagcacaacaagaagaag
ctacacagagagctggacgagcaacaggaagccaacgagcaactcaacagtcaactcaaa
gctctgcgcagcgagatgagacgcaagaacacgtcggcccctttgctcaacaacttggac
gacgacgatgacgacgacgacgtcagcaccgacggagagatgtacttcagctcgtcgggg
tacaagcgctcctccagtcaggaaaacagcttgtcaggcttcggcgtatga
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