Xiphophorus couchianus (Monterrey platyfish): 114142849
Help
Entry
114142849 CDS
T05908
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xco03009
]
114142849 (spata5l1)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
114142849 (spata5l1)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
114142849 (spata5l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_33
TIP49
AAA_14
AAA_7
bpMoxR
NACHT
AAA_lid_PRS2_C
NTPase_1
Rad17
Mg_chelatase
nSTAND3
NB-ARC
AAA_19
AAA_18
Motif
Other DBs
NCBI-GeneID:
114142849
NCBI-ProteinID:
XP_027870157
LinkDB
All DBs
Position
4:24943772..24949286
Genome browser
AA seq
748 aa
AA seq
DB search
MESLRLLSVDSSDRGSQRCRLGPGLMSSLGLRLGSPLLVSLPGGSCLCTAWPRPDLAEGF
LQMDLKCFTPSLISGLPAHLSLDTAQLSPAPCTKLKSVKATVVVRSLDFKKNTNSSLVHE
LVKDMLVGVYVHKEFVINLEDFNTDIRYVAVHGISPKSAAAGVITSKTGLEIAEIQTVQH
YKSPLQDQHTPLLGGLEEVSASLREMLQLPLLYPNTLTSLGVSCPRGVLLVGPPGVGKTV
LVRRVVMEVGASLVVVRGPEVVGSRPGESEETLRAVFERARSAAEEGPCVLFLDELDSLF
PKRSGSSAPENRLVAQLLTLMDGMSRSDRFLIVGATNRPDSLDPALRRPGRFDREVIIGA
PTLLQRKAILSVLCERMPVGPTVNIAELAQITTGYVGADLSALCREAAMHALRENIKGSG
EQVVDMKHFQEALKLVGPSCLRGSLGRTEISPVLWEQIGGLEEVKSKLRQSIEWPMRHPE
AFVRLGLCRPRGVLLYGPPGCAKTTLVKAAATSSRCPFLSVSGADLYSPYVGDSEKALAQ
LFRQARACAPCVLFLDEIDSLIGSRSDVGTPNSVQTRLLSVLLNEMDGIGLKTVERRGAD
KVLQAEGVEQSRTDDELDCQEVCNKDVMVVAATNRPNCIDSALLRPGRLDHIIYVPPPDL
QARLAILKVCTKSMPVDSHVCLEELASKTKLYSGADLENLCKEAALLALLEENMEASSIQ
QTHFLRSISRMSPSLTAQQISSYLIPHQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcttaggctgctgtcggtggattcctctgaccggggttctcagagatgcagg
ctgggcccgggtctgatgtcgtcgttgggtctaagactgggctcccctctgctggtgtct
cttcccgggggaagctgcctgtgcaccgcctggccccgtcccgacctggcggagggcttc
ctgcagatggacctgaaatgtttcactcccagcttgatttctgggctccccgcacacctg
agcttggacacggctcagctcagtcccgcaccctgcaccaaactgaagagtgttaaagca
actgtggtggtccggagtcttgattttaagaaaaacacaaactctagccttgttcatgag
cttgtgaaggacatgctggtgggtgtttatgtccataaagagtttgtaataaacctggag
gattttaatacagatatcagatatgttgctgttcacggcatcagtccaaagtctgcagct
gctggagtcatcacctctaaaactggtttggagatagctgagatccagacagtccagcat
tacaagagtccactgcaggaccagcacacacccctgctgggaggactggaggaggtgagt
gcatccctgagagagatgctgcagctgcccctcctttatcccaacaccctgacctcgctg
ggggtgtcctgccccagaggtgtgctcctggtggggcctcctggagttgggaagaccgtg
ttggtccgcagggtggtcatggaggtgggagccagcctggtggtggtcagaggaccagag
gttgtcgggtcacggccgggtgagagcgaggagaccctgcgggctgtgtttgagcgtgcc
cggtctgcagcagaagagggcccctgcgtgttgtttttggacgagctggactctctgttt
ccaaagagaagcggctcctcggcgccggagaaccggctggtggctcagcttctcacgctg
atggatgggatgagtcggtccgaccgcttcctcatcgtaggagccaccaacaggccggac
agtttagacccggcgctgcgtaggcctgggaggtttgacagagaggtgatcatcggtgcg
ccaacactgctgcagagaaaggccatcctgtctgtcctgtgtgagagaatgcccgtgggc
cccaccgtgaacattgcagagcttgctcagataaccacaggatatgtcggagcagacctg
agtgcactgtgcagggaggctgccatgcacgctttgagggagaacataaagggttcaggg
gagcaggtggtggatatgaagcacttccaagaggccctgaagttggtgggcccgtcctgc
ctgagaggcagcctgggcaggacagagatctccccggtgctttgggagcaaatcggaggc
ctggaggaagtcaaaagcaaactaagacagagcattgagtggcctatgagacaccctgag
gcatttgtccgtctggggttgtgtcggccgcgcggcgtcctcctgtacggacctccagga
tgtgcaaagacgacgcttgtcaaagctgctgccacctcgtcccgctgtcccttcctgtcc
gtcagcggcgccgacctgtactctccgtacgtcggagactctgagaaagctttagctcag
ctgttccggcaggcccgcgcctgcgcgccctgcgttctgttcctcgacgagatcgactcg
ttgatcgggtcacggtccgacgtcgggacccccaacagcgtgcagacccggctgctctct
gtgctgctgaatgagatggacgggatcggcctgaagacggtggagaggaggggagcagat
aaggttctgcaggcagagggagtggagcagagtcgcacagatgacgagctggactgtcag
gaggtttgtaacaaagatgtgatggttgtagctgccacaaacagacccaactgtatcgac
agcgccctcctccgacccggcaggctggaccacatcatttacgttccaccccctgatctg
caggctcgactcgccatcctaaaagtttgcacaaagtctatgcctgtggattcacacgtc
tgtctggaggagctggcttcgaagacaaagctttactctggagctgacctggaaaacctg
tgtaaggaagctgctctgctggcattgctggaggagaacatggaagcttcatccatccag
cagacacatttccttcgttccatcagcagaatgagtccttctctcactgctcagcagatt
agttcatatttaatacctcaccagtga
DBGET
integrated database retrieval system
