Xiphophorus couchianus (Monterrey platyfish): 114142999
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Entry
114142999 CDS
T05908
Name
(RefSeq) lymphocyte antigen 75-like
KO
K06559
lymphocyte antigen 75
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xco04054
]
114142999
04090 CD molecules [BR:
xco04090
]
114142999
04091 Lectins [BR:
xco04091
]
114142999
Pattern recognition receptors [BR:
xco04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
114142999
CD molecules [BR:
xco04090
]
Proteins
114142999
Lectins [BR:
xco04091
]
C-Type lectins
Group 6: Mannose receptor family
114142999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
114142999
NCBI-ProteinID:
XP_027870475
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All DBs
Position
4:complement(23366025..23391448)
Genome browser
AA seq
1739 aa
AA seq
DB search
MLKFSAATLCLCLLMLETSVSWGTCSPESVQSHDEDAFTIQHSTTGKCVETGLSRDFRIT
ACNSTVRSQLWKWGSGERLFHVASSLCLALNVSSKMLTLVDCGSTVPLTWRCLDGLVYTV
YQMGLTVTKDKVGSRRDSKDAWVRGGTQENICQRPYRVVHTTRGNSAGAPCQFPFKVNNT
WHHGCIPDAQVPRLSWCATSSDFDYEQKWGNCLLPEVGCQTLFSGPPGGPCYEFVSGAAV
TWHEALHSCRSQGADLLSLSESDLNSIAFLGGLREMPERMWIGLHQLDSSQGWQWSDGSP
LYVLRWEAGMPFTSFLIESDCGVLNSGKNFESESCNKRLPYICKKRVNASDTTAADPLVN
KETVCSEGWVPWNGWCYKLINDINEQRNFVDAQEYCNNTEGGAQLASFHSIDNIEMISTY
FPTDGNFAGAWIGLKGYGLKPTIFMWTDKKPVSFTYWDQNQPVQNAQDPTCVFYSRESHG
WRVGDCSTKMSFMCQIKGVFNESSVQAGCRYEDGWRRHGSSCYLMRTEQVPFKDHCNVTI
RNRFEQAFINRLLAEHISKDPQYFWIGLQDIKNTGEYQWMSQGDSSGVVTYTNWGWFQPD
RDGGCAVISTAKPLGRWEIKNCTLFKAGTICRTDLQPPPPPEPVPDPNATCADGWMTETD
SKYCYKVFHEERLSRKRSWEEARRFCQALGANLPSFTNIKEMAFLHRIMRNSISDDRYFW
VGLNRRNPTDQSWQWSDGRPVSFDVLHHEFHEDDAYNRDCTAFKSMKRTFTHLLLYLYDI
NIPPFFATPFHCDAQLEWVCQIPRGIKPKTPEWYKPDGHHETSVFIDGAEFWFVKEPKLS
FDEATLYCNANGSKLAFPTSITAAATIQQQLEKLGGPPDQNWWIDMTRPDRLFPSTYTKM
HFYRSQFLGRCTHITPKNYFPGHYLSCQQKNPFVCEKLNVTPVEKNPAKPQPERYPCGGR
SVSFRNKCYTLLNKTSIAFKQANEECKSLRGTLVTISDQMEQDFINTLLPSVVHMERVWI
GMKIMQNNFQWVDQTPVNYYNFNPLLLGMHKSMGIRTLDPEGSAICAFLINNNHSDMLGT
WDYAPCTQSQNVGICQYYADKTEEKTIITEKHLNVKDYSFLLVSKNLTWFEALEYCKNKS
MYPASIPDAYVQSVLGVNVNRVGTAMWIGLFSEDSGQHYRWTDHSHTVFSRWSSEPTTGG
CVYLDTDGFWKAAECEDQLGGAICYKPHNEVIPSPEHAATKCPHNIKGPNWIPWMSNCYT
FQLVPTRWDAFKKNKVADTCQELYPNASILTIRNEEENKFIAEKLKSYESLVHFVWLGMF
RNSDNQTMWYDGTSVQYSNWLKGRPSLNGTFMAGLTSEGTWILLKDKDTFEAFRQKSIVV
CKLDNESKKEYKHSLKNLKAYETLSYEVVTKRLNWSQALEECSQRGGHLASIHDGKHNEH
LQLIAKTDGFPLWIGLSNQDVSDSAFEWSDGTKFKYNYNIIESLTDFSSSEPSCVHMNPA
GEWVKTLCDTLQEGAICYTTNTTTSSQRAKLQNALENNNCPEGNGTSRWVQHQDHCYLFD
GSFYNYGVYFMDQAKTICQQLDAQLLTIKTKQENDFLNKHLTDDPLITSRVWLDVKLDSA
GKPVSWQDGSTLSYTNLKSEPSSSGKQSNPNCVVMMAGDDGDWKLVDCESTKSRVVCKTQ
AKSSGSPVALGLFITVLLALLLAIGFVIYKKKRSYFSSTVRYERTLDDLDTTSIITGKD
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaattctccgcagcgacactttgcctttgtttgttgatgctggagacttctgtc
agctggggaacttgttcgccggagagcgtccaaagccacgatgaagatgctttcaccatc
cagcattccaccacaggtaaatgtgtggaaacgggactctcaagagactttagaatcacc
gcctgcaactccaccgtcagatcccagctgtggaagtggggttcaggcgaaaggctcttc
cacgtggcgtcgtctctctgcttggcgctgaatgttagctcgaagatgcttaccctggtt
gactgtggctccaccgttcctttgacgtggcgctgcctcgacggactggtgtacacagtt
taccagatgggcctgacggtcaccaaagataaagttgggtccaggcgggactctaaagac
gcctgggttagaggaggaacccaagaaaacatctgccagaggccttatcgtgttgttcac
accaccagaggaaactctgcaggagcaccatgccagttccccttcaaagtcaacaacacc
tggcatcacggatgtattccggatgcacaagtccccagactgtcctggtgtgccacatcc
tcagactttgactatgagcagaagtgggggaactgtctattacctgaggtgggctgccag
accctgttctccggaccgcctgggggaccctgctatgagtttgtttccggcgccgcggtg
acctggcatgaagctttgcattcatgtcgcagtcagggagccgatcttctcagtctgtcg
gagtctgatctcaactcaatagcctttttgggcggtcttcgtgaaatgcctgagaggatg
tggatcggccttcaccaattagacagctcccagggatggcagtggtcagacggatcccct
ctttatgtcttgcgctgggaagcaggaatgccattcacctcgttccttattgagtcagac
tgcggcgtcttaaattctgggaagaactttgagtccgagtcatgcaacaagcggctgccg
tacatctgcaagaagagggtgaacgcctctgacacgacagccgcagatcctctagtaaat
aaagaaacggtgtgttcagagggctgggtgccatggaacggctggtgttacaagttaatt
aacgacatcaacgaacagaggaactttgtagatgcccaagaatactgcaacaacacagaa
ggaggagcgcaactagctagcttccactctattgacaacatcgagatgatcagcacgtat
tttccgacagatggaaattttgctggtgcctggattggtctcaagggttatgggttaaaa
cccaccatcttcatgtggactgacaagaagcctgtcagttttacctactgggaccaaaac
cagcctgtccagaacgctcaggatcccacctgtgtcttctactctcgggagtctcatggt
tggcgggttggggactgctcaacgaagatgtctttcatgtgtcagataaaaggagtcttc
aatgagtcgtcagtacaagctggatgccgctatgaagatgggtggaggaggcatggcagc
tcctgctatctaatgaggactgaacaagtgcccttcaaagaccactgcaacgtcactatc
agaaacaggtttgagcaggccttcatcaaccgcctgcttgcagaacacatcagcaaagac
cctcagtatttctggataggtctgcaggacatcaagaacactggagagtatcagtggatg
agccagggtgactcctcgggcgtggtcacatatactaactggggctggtttcaaccagat
agggacggaggttgtgctgtgatttcgacagcaaagccgctgggcaggtgggaaataaag
aactgcacccttttcaaagccggcacaatctgtagaacagacctccaaccacctccgcca
ccagaaccagtaccggatcctaatgcgacctgtgccgatggatggatgactgaaacagac
agcaaatattgctacaaggtgtttcatgaggagcggctcagcaggaaacgctcctgggag
gaagccaggaggttctgtcaggctctgggagccaacctgcccagtttcacaaacataaaa
gagatggcatttctgcaccgcattatgaggaattcaattagcgacgatcggtacttctgg
gtaggcctgaacagaagaaatccaaccgatcaatcctggcagtggagcgatggccgccct
gtgtccttcgatgttttacaccacgagttccacgaggacgatgcctacaacagagactgc
acggctttcaagtcaatgaagagaaccttcacacacctgctgctctacctttatgacata
aacatcccaccgttctttgccacgccattccactgtgacgctcagctggagtgggtctgc
cagattccccgcggaattaaaccaaagactccagagtggtacaagcctgatgggcaccat
gagacctctgtcttcatagacggagctgagttttggttcgtaaaagagcccaaactaagc
tttgatgaagctactctgtattgcaatgcaaatggcagcaaactggcttttccaacaagc
ataactgcagctgcaacgatccagcaacaactggaaaagctgggtggaccaccagatcaa
aactggtggatcgatatgacacgccctgaccggctgttcccctctacgtacaccaagatg
cacttttaccgctctcagtttttgggccgatgcacgcacatcactcctaaaaattatttt
ccaggccattatctaagttgccagcagaaaaatccgtttgtgtgtgaaaagctcaacgtc
acaccggtggagaaaaaccctgcgaaaccccaacctgaaagatatccttgtggaggccgc
tcagtctctttcaggaacaagtgctacacactgttgaacaagacctctatagcgttcaag
caggccaatgaagagtgcaaatctttgaggggaaccctggtcaccatatcagatcagatg
gaacaagacttcatcaacactctgttaccaagtgtggtacatatggaaagagtatggatc
ggtatgaaaatcatgcagaacaacttccaatgggtcgatcagaccccagtgaactactat
aattttaaccctctgcttctgggcatgcacaagtctatgggaatcaggactttagatccg
gagggttcagccatttgtgcgttcctgatcaataacaaccactctgacatgcttggaacc
tgggactacgctccttgcacccagagtcaaaatgtgggcatttgccaatactatgcagat
aaaaccgaggagaagaccattatcacagaaaagcatttgaatgtcaaagactactctttc
ctactggtttccaaaaatcttacctggtttgaggctttggagtactgcaaaaataaaagt
atgtatccagcgagcattcccgacgcctacgtacagtccgtcctcggtgtgaacgtgaac
cgcgttggaaccgccatgtggatcggccttttcagcgaagatagtgggcagcactaccgg
tggaccgaccacagtcacaccgtgttcagtcgatggtcttcggagcccaccactggaggg
tgtgtgtacctggacacagacggcttctggaaagccgcggaatgtgaggatcagcttgga
ggcgccatctgctacaaaccgcacaatgaagtcattccctcgccggagcacgctgccact
aaatgccctcataacataaaaggaccaaactggattccctggatgagcaactgttacacc
tttcaactcgtcccaaccagatgggatgcttttaaaaagaataaagtggcggacacctgc
caagaactttatccaaacgcctccatcctaaccatcaggaatgaggaggagaacaagttt
atcgcagaaaagctcaaatcctacgaaagcttagtccactttgtttggctgggaatgttc
agaaatagcgataaccagaccatgtggtacgatggtacgagtgtccagtattccaactgg
ttgaaaggccgacccagtttaaacggtaccttcatggctggtctcacctctgagggaacc
tggattctcttaaaagacaaagacacctttgaggctttcagacaaaagtcaattgttgtc
tgcaagttggataatgagtccaaaaaggagtacaagcattcgctcaagaacctgaaggcc
tacgagaccctctcttatgaggttgtcaccaaacggttaaattggtctcaggcgctagaa
gagtgcagtcagcgtggcggtcacctggcaagtattcatgacggaaaacacaacgagcac
ctgcagctcatcgccaagacggatggcttcccgctctggattggcctgtcaaaccaggat
gtcagtgactcagccttcgagtggtcagatgggacgaaatttaagtacaattacaacatc
atagaatcgctgacggacttcagctcaagcgagcccagttgtgttcacatgaaccctgct
ggagagtgggtgaaaaccctctgcgataccttgcaagagggcgccatctgctacaccacc
aacaccaccacgtcctcccaaagagctaagctgcaaaacgccctggagaacaacaactgc
cctgagggcaacgggacgtctagatgggttcagcatcaggatcactgttatttattcgac
gggagcttctataactacggtgtttacttcatggaccaggccaagacaatatgtcagcag
ctggatgctcagctactgacaatcaaaaccaaacaggagaacgacttcttgaacaagcac
ctcaccgacgaccctctcatcaccagtcgagtttggctcgacgtcaaattagactctgca
ggtaaacctgtgtcctggcaggacggctcgaccctgtcctacacgaacttgaagtctgag
ccctcgtcgtcagggaaacagtcgaaccccaactgtgttgtcatgatggcaggagacgac
ggcgactggaagctggtcgactgtgaatccaccaagagccgtgtggtctgcaaaactcaa
gcaaagtcttcaggctcccctgttgcactgggactcttcatcacagtcctcctcgctctc
ctcctagccatcggctttgtcatctacaagaagaaacggtcctacttctcctcgacagtt
cgctatgagaggacccttgatgacttagacaccaccagtataataacaggaaaagattga
DBGET
integrated database retrieval system
