Xiphophorus couchianus (Monterrey platyfish): 114143006
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Entry
114143006 CDS
T05908
Symbol
cilp
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114143006 (cilp)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
114143006 (cilp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
TSP_1
I-set
CarboxypepD_reg
CarbopepD_reg_2
Ig_2
TSP1_spondin
TSP1_CFP_C
Ig_5
ig
Prok-E2_C
Izumo-Ig
V-set
Motif
Other DBs
NCBI-GeneID:
114143006
NCBI-ProteinID:
XP_027870488
LinkDB
All DBs
Position
4:complement(19783987..19792934)
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AA seq
1159 aa
AA seq
DB search
MSHRSLLIFLGVTAATVLTVQGSWRGDNKESNLAVYHSDDNFDWTTWFNVDHPGGRGDYE
QLDAIRFYYRTRVCENPRAVEARTTEWVPARETGEVVHADPTVGFWCLNEEQSPGHNCSN
YAVRFLCPKERSVNTQGTWGLWSNWSPCPALCGQVGVQLRYRNCQSQSVTCNGPKIEGKP
CNGPECIKTDCYLHCVIGRVNADCDACMCEEHILLGSVRSAGGLIAEGAAILRSGKLLTL
TDHNGHFRIPGICPDGNTTLTVSLLGHATLDVVVPLTTERTSVLSVQLKRAEKLHVLSNP
ESKARREGQSAAFCCKVAGIPQPNKYQWFHNNILMEMQSESTLVLKDLHPEQAGEYYCRA
SGPSGAVKTKPAILKIIGREEHSCNPTPESHLIRLPHDCYQNSTNSFYYDVGKCHSGTCA
GQLDNAIRCKDNVAYCCGVATMEERQLTCRGYQLPTMVVTECGCQKCVNTKAVVYGRAIA
ADNGEPMRFGHIFMNGVRISRTGYKGTFSVQVPPDTERLVLTFVDNMQKFVNTTKVLPFN
TKGGAVYHEIKVLRKKAPVTISSSETNILNLGEVEGQEAMVQIQIPPHSFYKENGEVFTG
NVNASVTFLDPRNVTTAAAASSDLNFIGGEGDVLPLRTYGMFSVDFRGEENNEPLNAGEV
KVFLDSAQVKMSEHLSNMKLWSLNPETGLWEEEGSLQLDKKRRGKREERTFLIGNMEIRE
RRLFNLDVPENRRCYVKVRAFRSERFMPSEQVEGVVVSLINMEPTPGYSSNPRAWGRFDS
AVTGPNGACLPAFCDEQKPDAYSAYVMANLGGEELEAVPSAPKLIPSLVGVPQPYLRKLN
YRRTDHEDSRVKKTAFSVNVAKPSPNAAEESNGPVYAFEKLKECEEAPFSAAHFRFSRVE
GDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRACYIKVKINSPHEINVRSRNMGGTHP
KTVGQLYGLRDTRSIRDMEQANVSAVCLEFKCSGMLFDQDRVDRTLVKVIPQGSCKRDHV
NTMLQDYLVNHLPLAVNNDTNEFTMLAPLDSLGHNYGIYTETEQDPRTAKEIALGRCFDG
TSDGTSRVMKTNEGVALSFSCGDREVTRQSIFQAMQSSQGQIVTSVARGDNRKTRRRQRA
NTLRRSGKRSARNPTGGKK
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcacataggtctcttctcatctttctgggagtaactgcagccactgttcttacagtt
caaggatcatggagaggagacaacaaagagtctaatcttgcagtctatcactctgatgac
aactttgactggaccacatggttcaacgttgaccacccaggtggccgaggagactacgag
cagctggacgccattcgcttctattaccgtaccagagtgtgtgagaatccgcgcgcagtt
gaagctagaaccaccgaatgggtcccagcccgggaaactggggaggtggtacacgcagat
ccaactgtaggattctggtgtctcaatgaagagcaaagtcctggacacaactgctctaac
tatgcagttcgctttctctgtccaaaagaaagaagtgtaaacactcagggaacctggggt
ctatggtcaaactggagcccatgtcctgctctctgcggtcaagtgggtgtgcagcttcgc
tatcgaaactgccagtctcaatcagtaacttgcaatgggcctaaaatagagggaaaacca
tgcaacggacctgagtgcatcaagacagattgttatctgcactgtgtgattgggagagtg
aatgctgactgtgatgcttgcatgtgtgaagagcacatacttttgggctctgtgcgaagt
gccggtggtctgattgctgagggagcagcaattcttcgctcaggcaaactcctcaccctc
acagaccacaatgggcactttagaatacctggaatatgcccagatggcaacacaacactg
acagtcagcctgctgggtcacgcaactcttgatgtcgttgtgcccctcaccactgagcgg
acctcagttctcagtgtgcagctgaaaagagcagaaaagcttcatgtcttaagtaaccct
gagagtaaagccaggagagaaggacaaagtgctgccttctgctgcaaagtagctggaata
ccacagcctaacaagtatcaatggtttcataacaatattcttatggaaatgcaatcggag
agcacactggtcctgaaagatttacatccagagcaagctggagagtactactgcagagca
agtgggccgtccggcgccgttaagaccaaacctgccattctaaaaatcataggtagagag
gagcattcatgcaaccccacgcctgaatctcacctcattcgccttccacatgactgctac
caaaacagcacaaactccttctactacgatgtgggcaagtgccattcaggcacatgtgct
ggacagctggacaatgccatcaggtgcaaagacaatgtggcatactgctgtggcgtggca
acgatggaagagagacagctgacgtgccgaggctaccagttgcccaccatggtagtgaca
gagtgtggctgtcagaaatgtgttaacaccaaggctgttgtttatggtcgtgccattgct
gcagacaatggtgagccaatgaggtttggccacatcttcatgaatggagtcagaatcagt
cgcacaggctacaaaggcaccttctctgtccaggttcccccagacactgaacgactggtg
ttgacttttgttgacaacatgcaaaaatttgtcaacaccacaaaggtgcttccatttaac
acaaagggaggagctgtttaccatgaaatcaaagttctacgaaagaaagctcctgtgacc
atcagctcctcagaaactaacattctaaatctcggggaggtagaaggccaggaagcaatg
gtccaaatccagattccccctcattctttctacaaggagaacggggaagtctttaccggt
aatgtcaatgcaagtgttacatttttagacccaagaaatgtcactactgctgctgctgct
tcaagtgaccttaattttataggaggtgaaggtgatgtgcttccactgagaacctatggc
atgttttcagttgactttagaggtgaggaaaataatgagcctctaaatgctggcgaggtt
aaagtgttcttggactcagctcaggtgaagatgtcagagcacctcagcaacatgaagctt
tggtcactgaaccctgaaactggcctgtgggaggaagaagggagtttgcagctagataag
aaaaggagaggcaaaagagaagagagaacatttttgataggaaacatggagatcagagag
aggcgtctgtttaatcttgatgtccctgaaaatcgcagatgctatgtcaaagtgagagct
ttccgcagtgagcgtttcatgcccagtgagcaggtagagggagttgtggtgagtctcata
aacatggaaccaacacctggctactcctctaatcctcgtgcctggggtcgttttgatagt
gctgtcactggcccgaatggagcttgtcttcctgccttctgtgatgagcaaaaacctgat
gcttattctgcatatgtgatggctaaccttggaggagaggaactagaggctgtgccttct
gctccaaaactcattcccagccttgttggagtgccccagccttaccttagaaaactaaac
tacaggcgaacagaccacgaagacagcagagtaaaaaagactgcatttagtgtcaatgtg
gcgaaaccaagtcctaatgcagctgaggagtctaatggaccagtatatgcatttgaaaag
ctgaaagaatgtgaagaggccccatttagtgctgcacacttcagattttcaagagttgaa
ggagaccgttatgattacaacactgtgccatttaatgaagatgacccaatgagctggaca
gaggattacctgagttggtggcctaagcccatggaataccgggcctgctacatcaaggtt
aaaattaacagtccgcatgaaatcaatgtaaggtctcgtaacatgggtggcacccatcca
aagacagtaggccagctgtatggtctcagagacactcgcagcattcgtgatatggaacag
gcaaatgtttcagcagtgtgtctggagttcaagtgtagtggcatgctgtttgatcaggac
cgtgtggatcgtaccctggtgaaggtgattcctcaaggtagctgtaagagagaccatgtg
aacacgatgcttcaagattatctggtgaaccacctacctctagctgtcaacaatgacacc
aatgagttcaccatgttggcacctcttgactctcttggccacaactatggaatctacaca
gagacagaacaagatccacgcacagcaaaagagattgcacttgggcgctgctttgatggc
acttctgatggcacatctagagtcatgaaaaccaatgagggtgtggcgttaagcttcagt
tgtggggatcgtgaagtgacacgtcagagtatctttcaagctatgcagagctcccaaggt
cagatagtaacaagtgttgcgagaggagacaacaggaaaaccagacgtcgacaaagggcc
aacacactccgtaggagcgggaaacgtagcgccagaaatcccacaggaggaaaaaaataa
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