Xiphophorus couchianus (Monterrey platyfish): 114143040
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Entry
114143040 CDS
T05908
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114143040 (lrp4)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114143040 (lrp4)
Membrane trafficking [BR:
xco04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
114143040 (lrp4)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
114143040 (lrp4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
cEGF
DUF5050
EGF_CA
Motif
Other DBs
NCBI-GeneID:
114143040
NCBI-ProteinID:
XP_027870553
LinkDB
All DBs
Position
4:complement(4746844..4859275)
Genome browser
AA seq
1918 aa
AA seq
DB search
MQLAAVLWGVLATLFLSQSPGVQGSADCSCGRNHFTCAVSAFGECTCIPAQWQCDGDNDC
GDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFQC
QNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCTDGSCIAEHWYCDGDTDCKDGS
DEENCPSDVMTATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSVEFM
CSSGMCINSGWRCDGEYDCDDQSDEKNCTSSMCTADQFRCGTGRCVRLSWRCDGEDDCPD
RSDEEGCEKTDSPPCAPDQFQCGNGRCIGQRKVCNEVNDCGDGTDEHPHHDCRPRSSEGN
CNQNNGGCLQKCQMVRGLVQCTCHNGYRLTDDNKSCQDVDECAEEGYCSQGCTNTEGSFL
CRCVHGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHH
SRELVFWSDVTLDRIMKANLNGSNVEEVISTGLESPGGLAIDWIHDKLYWTDSGTSRIEV
ANLDGTHRKVLLWQNMEKPRAIALHPIEGKIYWTDWGNTPRIEYSNMDGSNRRVIADTHL
FWPNGLTIDYASRRIYWVDAKHHVIERADLDGRNRKAVISNGLPHPFAITVFEDSLYWTD
WHTKSINSANKFTGKNQEVIRNKLHFPMDIHTLHPQRQPAGGRNRCGFNNGGCSHLCLPS
NKTYTCACPTGFKKVDSNNCADSLDKFLLFARRTDIRRISFDTEDMSDDVIPLADVRNAV
AVDWDDKDGYIYWTDVTTDSINRALWNGTNQEVVVDTSLESPAGLAIDWVTNKLYWTDAG
TDRIEVSNADGSMRTVLIWENLDRPRDIVVDPTGGFMYWTDWGANPKIERAGMDASNRIV
IISSNLTWPNGLAIDYETKRLYWADAGMKTIEYGNFDGSDRQVLIGSELPHPFGLTVHKD
KLYWTDWLSKSIQSADKLTGLERHTLAENLENLMDIHMFHRHRETENNPCAVNNGGCSHL
CLLAPAPKASSCSCPTGINLQSDGKTCTPGMSSFLIFARRTDIRMVSLDIPYFADVVLAV
NSSMKNTIAIGVDPKEGKVYWSDSTLKKISRANINGTAHEDIISTGLMTTDGLALDAVGR
KIYWTDTGINRIEVANLDGSMRKVLVWQNLDSPRAIALYHEMGYMYWTDWGEHAKLERSA
MDGSDRVVLISNNLGWPNGLAVDTAGSQLLWADAHTERIEAADLNGQNRHTLVTPVQHPY
GLTLLGSHIYWTDWQSRSIQRADKNTGANTITVRANLPGLMDIQAVDRDRPLGFNKCARG
NGGCTHLCLPRPNGTSCACPTGIQLKGDGRSCEDSPETYLLFSNRVSVRRISLDTSDHTD
VHVPVPELHNVISLDYDSVDGKLYYTDVTLDVIRRANLDGSGMETVISQGLKTTDGLAVD
WVARNMYWTDTGRNTIEVARLDGTCRKVLVNNSLDEPRAIAVFPSKGFLFWTDWGHIAKI
ERSHLDGSDRKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESSDLNGKLRQVLVSPV
SHPFALTQSKPVSSPLTPFSRLSQQDRWIYWTDWQTKSIQRVDKHTGRNKETVLANVEGL
MDIIVVSPHRQTGTNLCGINNGGCSHLCFAKTSSFVCACPDEPDGRPCSTVAGYIPTSPS
KGASSTPVPKKIPNRLTDAPHRGPSLTNCTDKDLNAGGCLNTVVTAPHGEGLHISYVIGG
VLTILAILILIAAFIIYRHKKSKFAEPGVSNLTYSNPSYRTSTQEVKIETSQKPPIYNQL
RYKKEGGVDGGYTKEKIRIVEGVCLLSSEELYWDDLKQIKPSRGGLHTCMRTDTVSLQTS
SASLDDGETEQLLQEEASECSSITTLTPSAITPQRHAQHSLPDTGWASIRKPSTESEV
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggccgcggtgctgtggggcgtcctggcaactttgttcctcagccagagtcca
ggtgttcagggcagtgctgactgttcgtgcgggaggaaccacttcacatgtgcggtcagc
gcgttcggggagtgtacctgcattccggcccagtggcagtgtgacggagacaatgattgc
ggggaccacagcgatgaggacggatgcatgctccctacctgctcaccgctggacttccac
tgcgacaacgggaaatgtatccgtcgctcctgggtttgcgatggagacaacgactgcgaa
gacgactcagacgagcaagactgccctcccagagaatgcgaagaggatgagttccagtgc
caaaatggctactgcatccgcagcctctggcactgtgacggcgacaatgattgtggtgac
aacagtgacgagcagtgtgatatgcgcaaatgttcagacaaagagttccggtgcacagat
ggaagttgtatcgctgagcactggtactgtgatggagacacggactgtaaggacggatca
gatgaggaaaattgcccctcagatgtgatgacggccacctgcagcgtggaggagttccag
tgtgcatatggtcgctgtatcctggatatctaccactgcgacggagatgatgactgtgga
gactggtcagatgagtcggactgctcttcccatcaaccctgcagatcagttgaattcatg
tgcagtagtggcatgtgcatcaactctggctggagatgtgatggtgaatacgactgtgac
gaccagtcggacgaaaagaactgcacttcgtcaatgtgtacagctgaccagttccggtgt
ggaactggacgttgtgtgcggttgtcatggagatgtgatggtgaggatgactgcccggat
cggagtgatgaagaggggtgtgagaaaactgacagtcctccatgtgctcctgatcagttc
cagtgtgggaatggccgttgcatcggacagagaaaagtgtgtaacgaggtcaacgactgc
ggtgatgggacagatgaacacccacaccacgactgcaggccacggtccagtgagggcaac
tgtaaccagaataatggaggctgcttacagaagtgccagatggtcagaggactggtccag
tgcacctgtcacaacggataccgactgaccgacgacaacaaatcctgccaggatgtggat
gagtgtgcggaagagggttactgtagccagggctgtaccaacacggaggggagtttcctg
tgccgctgtgtccacggctacgagcttcggcctgataagcgcagctgcaaagctctgggt
ccagagccagtgctgttgtttgcaaaccgcatcgacatccgacaagttttaccacaccgc
tcagaatacaccctcctgctcaacaacttggagaacgccatcgcgctggacttccatcac
agccgagagctcgtcttctggtcggacgtgacgcttgaccgcatcatgaaggccaacctc
aacggctccaacgtggaggaggtcatctccaccggtctggagagcccagggggattggca
atagactggatccacgataagctttactggacagactccgggacgtcccgcattgaagtg
gccaatctggatgggacgcaccgaaaagtgttgctgtggcagaatatggagaagcccaga
gccattgcattgcaccccatcgagggtaagatttactggacggactgggggaacacgcca
cgcatcgagtactctaacatggacggctcgaaccgccgggtcatcgcagacacacacctg
ttctggcccaacggcctcaccattgactacgccagccgccgcatatactgggtggacgcc
aagcatcacgtcatcgagagagcggatttggatggacgcaaccgcaaggccgtcatcagc
aatggccttccgcatccatttgccatcacggtttttgaggacagcttgtactggactgac
tggcacaccaagagcatcaacagtgccaacaaattcacaggcaaaaaccaggaggttatc
cgcaataagctccactttcccatggacatccatacccttcacccgcaaaggcagcctgca
ggtggcagaaaccgctgtggattcaacaatggaggctgcagccacctgtgtctccccagc
aacaagacctacacgtgcgcctgtcccactggcttcaaaaaagtggacagcaacaactgt
gctgacagtcttgacaagttcctgctttttgcccgaaggacggacatccgacgaatcagc
tttgatactgaggacatgtccgatgatgtcatccccctggccgacgtgcgcaacgccgtg
gcggtggactgggatgacaaagatggctacatttactggacggacgtcaccacagactcc
attaacagagcgctgtggaatggtaccaaccaggaggtggtggtagatacaagcctggaa
agccctgcaggcttggcaattgactgggtgaccaacaaactttattggaccgatgctggt
acggatcgtatcgaagtttccaatgcagacggcagcatgcggactgtgttgatctgggag
aacttggaccgacccagagacattgtggtcgacccaacgggaggtttcatgtactggacc
gactggggagccaacccaaagattgagcgggcaggaatggacgcctccaatcggattgtc
ataatctcgtccaatctgacgtggcccaatggactcgccatcgactacgagaccaaacgc
ttgtactgggccgatgcaggcatgaaaactattgaatatggcaacttcgacggttctgac
agacaggttttgataggcagtgagctacctcaccctttcgggctcactgtacacaaagac
aagctgtactggactgactggctgtccaagagcatccagagtgctgataaactcactggc
ttggagcgccacacgttggctgaaaatctggaaaatcttatggatattcacatgttccat
cggcaccgggaaactgagaataatccgtgtgcagtgaataatggaggatgcagccacctc
tgtctcctggctcctgctcccaaagcttccagctgctcctgtcccacagggatcaatcta
cagagcgacgggaagacctgcacacctggaatgagtagcttccttatctttgctcggcgg
acggacatcaggatggtttctcttgacattccatattttgctgatgtggttctggccgtc
aatagctcaatgaaaaacactattgctattggtgttgaccccaaagaaggtaaagtctac
tggtctgatagcacactaaagaaaatcagcagagccaacattaatggaacagcccatgaa
gacatcatatctacaggcttgatgacgacggatggactggcgttggacgctgttggcagg
aagatttactggaccgacactggaatcaaccgtattgaagtagccaacctggatggctca
atgagaaaagttcttgtgtggcagaaccttgacagtccccgagccatagctctttaccac
gagatggggtacatgtactggacggactggggagagcatgccaagctagagcgctcagct
atggatgggtcggaccgtgtggtcctcataagtaacaacctgggctggcctaacgggctg
gctgtggacacggccggatcccagttactgtgggccgacgctcacactgagcgcattgag
gcagctgacctgaatgggcaaaatcgacacacccttgtgactcccgtccaacacccctat
ggtttgacccttctgggctctcatatatactggacggactggcagagccgcagcatccag
cgagccgacaagaacaccggggccaacaccattactgtgagagcaaatctgcctggcctg
atggacatccaagctgtggacagagacagaccacttggttttaataaatgtgcacgaggg
aatggagggtgcacacacctctgcctccctcgtcctaacggcacttcctgtgcgtgccct
actggcattcagcttaagggagacggcaggtcttgtgaggactccccggagacatacctg
ctcttctccaaccgcgtcagcgtgcgcagaatctccctggacaccagcgaccacaccgat
gtgcacgtgccagttcctgagctgcacaatgtcatctcactggactacgacagcgttgat
ggaaagctttactacacagatgttactctggatgttatcaggagggctaatctggatggc
agtggcatggaaacggttatcagccagggcctgaaaaccacagatggactggctgtggac
tgggtggccaggaacatgtactggactgataccgggcggaacacaattgaggtggcccgc
ctggatgggacatgccgcaaagtcctggtgaacaacagtttggatgaaccacgagccatt
gcagtgttcccaagcaaagggtttctcttctggacggattgggggcacattgcgaagatc
gagcgatcccatcttgatggctctgaccgaaaagttctaatcaacacggacctgggatgg
ccaaacggtcttactctagactacgacacaagaaggatctactgggtagacgcccacttg
gacaggatcgagagttcggacctgaacggaaagctgcgtcaggtcctcgttagtcccgtg
tcgcaccctttcgcccttacacagtcgaagccggtgtcctcccctctaactcctttctcc
cgactctcgcagcaagaccgctggatctactggacggactggcagactaagtccatccag
cgagtggataaacacactggccgcaataaggaaactgtgctggccaatgtggagggcctg
atggacattatagtggtatctccacacagacagacaggtactaacctgtgtggaataaat
aatgggggctgctctcacctctgcttcgctaagaccagcagttttgtttgtgcctgccca
gatgaaccagatgggcgaccctgttctactgttgcaggttacattcccacttctccctcc
aaaggtgccagcagcactcctgttcccaaaaagattcccaacagactgacagacgcgcca
cacaggggaccctctcttaccaactgcactgacaaggatttaaacgctggaggctgcttg
aacacagtggtgacagcccctcatggagaaggacttcatatcagctatgtgattggtggg
gttctcaccatcctggcgattctgatcctgattgctgcttttatcatttatagacacaaa
aagtctaaatttgctgaacccggtgtgagcaatctgacctacagtaacccctcctatcgg
acatccacacaagaggtcaagatcgaaacatcgcagaagcctccgatatacaaccagctt
cgatataagaaagagggtggagtggatggaggctacacgaaggagaagatccgcattgtg
gagggtgtgtgcctcctgtccagtgaggagctttactgggacgacctgaaacagatcaag
ccgtcccgaggcggcctgcacacctgcatgcgcactgacacagtgtccctgcagactagc
agcgcttcgctcgacgatggcgagacggagcagctcctccaggaggaggcgtctgagtgc
tcctccataaccacactgaccccctcagccatcaccccgcagcgccacgcccagcacagc
ctgcccgacaccggctgggcctccatacgcaaaccctccaccgagagcgaagtgtga
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